EWM23679.1, cds6996 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|585104833|gb|EWM23679.1| (camp responsive element modulator [Nannochloropsis gaditana]) HSP 1 Score: 907.516 bits (2344), Expect = 0.000e+0 Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
Query: 1 MVSPASNGGSGGDLPPSLPRPTSAGNLRRGVSSNPAVLPHQQTSQQQQQAQSMTAPHYQVLSPTTDLSQGMEQATICSRGNILQQNSMPPGALSVPHSKSLRHNDDDDQDTQQVKSNMYQHGQINSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVYERSGGGEGTGDRSGTREGSGEADGHLTVGQQAPPANLEEPYQNDRAVST 438
MVSPASNGGSGGDLPPSLPRPTSAGNLRRGVSSNPAVLPHQQTSQQQQQAQSMTAPHYQVLSPTTDLSQGMEQATICSRGNILQQNSMPPGALSVPHSKSLRHNDDDDQDTQQVKSNMYQHGQINSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVYERSGGGEGTGDRSGTREGSGEADGHLTVGQQAPPANLEEPYQNDRAVST
Sbjct: 1 MVSPASNGGSGGDLPPSLPRPTSAGNLRRGVSSNPAVLPHQQTSQQQQQAQSMTAPHYQVLSPTTDLSQGMEQATICSRGNILQQNSMPPGALSVPHSKSLRHNDDDDQDTQQVKSNMYQHGQINSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVYERSGGGEGTGDRSGTREGSGEADGHLTVGQQAPPANLEEPYQNDRAVST 438
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|673052741|ref|XP_008880331.1| (hypothetical protein H310_14291 [Aphanomyces invadans] >gi|574463997|gb|ETV91051.1| hypothetical protein H310_14291 [Aphanomyces invadans]) HSP 1 Score: 219.935 bits (559), Expect = 2.543e-63 Identity = 113/253 (44.66%), Postives = 166/253 (65.61%), Query Frame = 0
Query: 136 RRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAV 388
RRLE+NRESARECRRRK++H++ ++++ LE EN++L+ QLK G+E+ QE EK +I +L+ M+K GASE D+ ID FKE+YSDYG RRSA+ +H +QLE+LL+PT++TK+C+W L K D ED E + L ++L+ +L +T EQ+ + R IV + ++ + +L EL+ +E KN +LD E+ ++Q IL+PTQ AKFI+W+T NPACMH+LN+LW V
Sbjct: 206 RRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKYQICHELERMIKDGASEQDLAAKIDNFKEQYSDYGQARRSALSYHLHQLERLLMPTQVTKMCIWAL---KQDDAFW-----------------EDGEDETS--LLSILTHDLGLTEEQRKNIQSHRGAIVKICDNLRLALKLLNELKRDVEAKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNV 436
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|698825155|ref|XP_009845606.1| (hypothetical protein H257_18275 [Aphanomyces astaci] >gi|574099284|gb|ETV64909.1| hypothetical protein H257_18275 [Aphanomyces astaci]) HSP 1 Score: 218.009 bits (554), Expect = 1.068e-62 Identity = 112/253 (44.27%), Postives = 166/253 (65.61%), Query Frame = 0
Query: 136 RRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAV 388
RRLE+NRESARECRRRK++H++ ++++ LE EN++L+ QLK G+E+ QE EK +I +L+ M+ GASE D+ ID FKE+YSDYG RRSA+ +H +QLE+LL+PT++TK+C+W L K D ED E + L ++L+ +L +T EQ+ + R IV + ++ + +L EL+ +E+KN +LD E+ ++Q IL+PTQ AKFI+W+T NPACMH+LN+LW V
Sbjct: 199 RRLERNRESARECRRRKRDHILGVEERCKLLEKENMELRSQLKAGKEAMKQEEDEKYQICHELEHMITEGASEQDLAAKIDNFKEQYSDYGQARRSALSYHLHQLERLLMPTQVTKMCIWAL---KQDDAFW-----------------EDGEDETS--LLSILTHDLGLTEEQRKNIQSHRGAIVKICDNLRLALKLLNELKHDVEEKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNV 429
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|953501231|emb|CEG37601.1| (camp responsive element modulator [Plasmopara halstedii]) HSP 1 Score: 211.46 bits (537), Expect = 1.474e-62 Identity = 109/252 (43.25%), Postives = 170/252 (67.46%), Query Frame = 0
Query: 137 RLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAV 388
+LE+NRESARECRRRK+EH++ ++++ LE EN++L+ QLK G+E+ QE +EK R+ ++L++M+K GASE ++ + ID FKE+YSDYG RRSA+ +H +Q+E+LLLPT++TK+C+W L + D ED S P +L++EL ++ +Q+ + Q+R +I + ++ +L EL+ + +KNS+LD E+ ++Q IL+PTQ AKFI+W+T N ACMH+LN+LWR V
Sbjct: 9 KLERNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIKCGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWAL---RQDDSFWQ--------------EEEDETSLPV-----ILAKELGLSEDQKKKIQQQRGSISLICENLKSALELLAELKTEVTNKNSTLDTEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRTV 238
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|669154786|ref|XP_008612955.1| (hypothetical protein SDRG_08835 [Saprolegnia diclina VS20] >gi|530735490|gb|EQC33732.1| hypothetical protein SDRG_08835 [Saprolegnia diclina VS20]) HSP 1 Score: 216.083 bits (549), Expect = 4.951e-62 Identity = 116/288 (40.28%), Postives = 180/288 (62.50%), Query Frame = 0
Query: 102 RHNDDDDQDTQQVKSNMYQHGQINSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVY 389
R DDDDQ + + + G + PQ + +RLE+NRESARECRRRK++H++ ++++ LE EN++L+ QLK G+E+ QE EK +I +L+ M+ A E +I ID FKE+YSDYG R+SA+ +H +QLE+LL+PT++TK+C+W L K D ED E + L ++L+ +L +T EQ+ ++ R +V + ++ + +L +L+A +E KN +LD E+ ++Q IL+PTQ AKFI+W+T NPACMH+LN+LW V+
Sbjct: 158 RKADDDDQPP--LTHFLNKDGSSDLNPQ----RKKRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKTQICIELESMIHENAPEPEIAAKIDNFKEQYSDYGQGRQSALNYHLHQLERLLMPTQVTKMCIWAL---KQDDAFW-----------------EDGEDETS--LLSILTHDLGLTEEQRKSIQSHRSAVVKICENLRLALQLLHQLKADVEQKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNVF 417
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|813152628|ref|XP_012201241.1| (hypothetical protein SPRG_20257 [Saprolegnia parasitica CBS 223.65] >gi|641534138|gb|KDO28097.1| hypothetical protein SPRG_20257 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 213.001 bits (541), Expect = 2.880e-61 Identity = 107/254 (42.13%), Postives = 166/254 (65.35%), Query Frame = 0
Query: 136 RRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVY 389
+RLE+NRESARECRRRK++H++ ++++ LE EN++L+ QLK G+E+ QE EK +I +L+ M+ A E +I ID FKE+YSDYG R+SA+ +H +QLE+LL+PT++TK+C+W L K D ED E + L ++L+ +L +T EQ+ ++ R +V + ++ + +L +L+A +E KN +LD E+ ++Q IL+PTQ AKFI+W+T NPACMH+LN+LW V+
Sbjct: 152 KRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKTQICVELESMIHENAPEQEIAAKIDNFKEQYSDYGQGRQSALNYHLHQLERLLMPTQVTKMCIWAL---KQDDAFW-----------------EDGEDETS--LLSILTHDLGLTEEQRKSIQSHRSAVVKICENLRLALQLLHQLKADVEQKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNVF 383
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|675208151|ref|XP_008912960.1| (hypothetical protein PPTG_17095 [Phytophthora parasitica INRA-310] >gi|566012429|gb|ETI35340.1| hypothetical protein F443_18315 [Phytophthora parasitica P1569] >gi|567949868|gb|ETK75593.1| hypothetical protein L915_17829 [Phytophthora parasitica] >gi|567978537|gb|ETL29024.1| hypothetical protein L916_17731 [Phytophthora parasitica] >gi|568008035|gb|ETL82260.1| hypothetical protein L917_17559 [Phytophthora parasitica] >gi|568037922|gb|ETM35471.1| hypothetical protein L914_17641 [Phytophthora parasitica] >gi|568086764|gb|ETN01645.1| hypothetical protein PPTG_17095 [Phytophthora parasitica INRA-310] >gi|570316133|gb|ETO64081.1| hypothetical protein F444_18337 [Phytophthora parasitica P1976] >gi|570939907|gb|ETP05164.1| hypothetical protein F441_18190 [Phytophthora parasitica CJ01A1] >gi|570970194|gb|ETP33313.1| hypothetical protein F442_18144 [Phytophthora parasitica P10297]) HSP 1 Score: 215.312 bits (547), Expect = 3.659e-61 Identity = 110/259 (42.47%), Postives = 177/259 (68.34%), Query Frame = 0
Query: 130 AFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAV 388
+ ++KL+ LE+NRESARECRRRK+EH++ ++++ LE EN++L+ QLK G+E+ QE +EK R+ ++L++M++ GASE ++ + ID FKE+YSDYG RRSA+ +H +Q+E+LLLPT++TK+C+W L + D + ED S P +L++EL ++ +Q+ + Q+R +I + ++ +L EL+ + +KNS+LD E+ ++Q IL+PTQ AKFI+W+T N ACMH+LN+LWR+V
Sbjct: 241 SLQRKLK-LERNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWAL---RQDDSFWQ--------------DEEDETSLPV-----ILAKELGLSEDQKKKIQQQRGSISLICENLKSALGLLAELKTEVTNKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSV 476
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|1214694084|gb|OWZ08227.1| (hypothetical protein PHMEG_00019264 [Phytophthora megakarya]) HSP 1 Score: 213.386 bits (542), Expect = 9.823e-61 Identity = 109/260 (41.92%), Postives = 177/260 (68.08%), Query Frame = 0
Query: 130 AFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVY 389
+ ++KL+ LE+NRESARECRRRK+EH++ ++++ LE EN++L+ QLK G+E+ QE +EK R+ ++L++M++ GASE ++ + ID FKE+YSDYG RRSA+ +H +Q+E+LLLPT++TK+C+W L + D + ED S P +L++EL ++ +Q+ + Q+R +I + ++ +L +L+ + +KNS+LD E+ ++Q IL+PTQ AKFI+W+T N ACMH+LN+LWR+V
Sbjct: 207 SLQRKLK-LERNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWAL---RQDDSFWQ--------------DEEDETSLPV-----ILAKELGLSEDQKKKIQQQRGSISLICENLKSALGLLADLKTEVTNKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 443
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|1173929320|gb|OQR82571.1| (hypothetical protein ACHHYP_15858 [Achlya hypogyna]) HSP 1 Score: 211.46 bits (537), Expect = 2.456e-60 Identity = 115/288 (39.93%), Postives = 178/288 (61.81%), Query Frame = 0
Query: 102 RHNDDDDQDTQQVKSNMYQHGQINSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAVY 389
R DD+D Y +NS ++K +RLE+NRESARECRRRK++H++ ++++ LE EN++L+ QLK G+E+ QE EK +I +L+ M+ A E +I ID FKE+YSDYG R+SA+ +H +QLE+LL+PT++TK+C+W L K D ED E + L ++L+ +L +T EQ+ ++ R +V + ++ + +L +L+A +E KN +LD E+ ++Q IL+PTQ AKFI+W+T NPACMH+LN+LW V+
Sbjct: 156 RKADDED----------YAGKDLNSADMNPQRK-KRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKNQICIELETMIHENAPEQEIAAKIDNFKEQYSDYGQGRQSALNYHLHQLERLLMPTQVTKMCIWAL---KQDDAFW-----------------EDGEDETS--LLSILTHDLGLTDEQRKSIQSHRSAVVKICENLRLALQLLHQLKADVEQKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNVF 410
BLAST of EWM23679.1 vs. NCBI_GenBank
Match: gi|695372336|ref|XP_009514786.1| (hypothetical protein PHYSODRAFT_321312 [Phytophthora sojae] >gi|348687697|gb|EGZ27511.1| hypothetical protein PHYSODRAFT_321312 [Phytophthora sojae]) HSP 1 Score: 216.083 bits (549), Expect = 9.896e-60 Identity = 110/259 (42.47%), Postives = 177/259 (68.34%), Query Frame = 0
Query: 130 AFEKKLRRLEKNRESARECRRRKKEHVVELQKQVAHLEAENLKLKLQLKVGEESQAQERQEKARITKKLDEMVKTGASESDIWQTIDMFKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKVCMWMLLNMKGTDIVGGLNMTESKGLVGSLCNVEDSASEPARQLWAVLSEELHVTREQQAALLQRRDNIVAMDADIGVTSAMLRELRALIEDKNSSLDQELLEVQKILSPTQTAKFILWITRNPACMHMLNQLWRAV 388
+ ++KL+ LE+NRESARECRRRK+EH++ ++++ LE EN++L+ QLK G+E+ QE +EK R+ ++L++M++ GASE ++ + ID FKE+YSDYG RRSA+ +H +Q+E+LLLPT++TK+C+W L + D + ED S P +L++EL ++ +Q+ + Q+R +I + ++ +L EL+ + +KNS+LD E+ ++Q IL+PTQ AKFI+W+T N ACMH+LN+LWR+V
Sbjct: 433 SLQRKLK-LERNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWAL---RQDDSFWQ--------------DEEDETSLPV-----ILAKELGLSEDQKKKIQQQRGSISLICENLKSALGLLAELKTEVTNKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSV 668 The following BLAST results are available for this feature:
BLAST of EWM23679.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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