EWM23673.1, cds6994 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|585104827|gb|EWM23673.1| (sterol 4-alpha-methyl-oxidase [Nannochloropsis gaditana]) HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
Query: 1 MTYDAIGTWIRYLADLLSRSAVDHGELVTFLAAGTLVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKEHLLRRKHVEMDVNGKKAQVRAKELLRINM 290
MTYDAIGTWIRYLADLLSRSAVDHGELVTFLAAGTLVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKEHLLRRKHVEMDVNGKKAQVRAKELLRINM
Sbjct: 1 MTYDAIGTWIRYLADLLSRSAVDHGELVTFLAAGTLVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKEHLLRRKHVEMDVNGKKAQVRAKELLRINM 290
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|673019518|ref|XP_008863720.1| (hypothetical protein H310_02097 [Aphanomyces invadans] >gi|574480634|gb|ETW07627.1| hypothetical protein H310_02097 [Aphanomyces invadans]) HSP 1 Score: 160.999 bits (406), Expect = 6.213e-44 Identity = 88/234 (37.61%), Postives = 137/234 (58.55%), Query Frame = 0
Query: 36 LVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKEHLLRRKHV 269
++HE+++ T + Y + ++P R ++KIQ+ + T + V H+ + IQLP I+ + G + LP+A WQ V + +F FY HR+ HH SIYKY HK HHE+ +P GI++EYAH +E +++ + T L P++L H L L++WLA+R++ET+D HSG LPW+ LP +AGP+ HDFHH V + DY+FGTD F++ R+ +
Sbjct: 54 VLHEALYFTIWVPYLALDFIPYFR-KYKIQENKPNTWNETWRCVKHLIFSHVVIQLPMILCSDWGLRQLGFTFDLPLPAATTIAWQCFVSFILEDFYFYWVHRLLHHKSIYKYVHKIHHEYAAPFGIAAEYAHPIETMLLGV-GTFLGPLLLTRHLLTLWVWLAVRLFETIDDHSGYELPWAWSNFLPFWAGPVHHDFHHEKFDGNYASVFTVWDYVFGTDGAFRQSQADRRAI 285
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|308804473|ref|XP_003079549.1| (C-4 sterol methyl oxidase (ISS) [Ostreococcus tauri]) HSP 1 Score: 160.229 bits (404), Expect = 1.297e-43 Identity = 84/205 (40.98%), Postives = 123/205 (60.00%), Query Frame = 0
Query: 60 QRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMH-ASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYG-VLGLMDYIFGTDKEFKEH 262
Q+WKIQ+ PS E+ K V+ + +F+QLP + ++ + + G S+ +LP + WQ+ V + +F FY HR HH +YKY HK HHE K P GI++EYAH +E + + TLL P+ H + L++WL R+ ETV+ HSG +PW+P L+P + G + HDFHH T +G Y V D++FGTDKEF+ H
Sbjct: 65 QKWKIQREKRPSAEMVMKCVVKLLKSHVFVQLPMQMMFYFVAPYFGFSLALEALPKSRDFLWQIPVFFVIEDFYFYWIHRFLHHKRVYKYVHKVHHEHKYPFGIAAEYAHPVETFFLGI-GTLLGPLFFAKHMVTLWVWLFFRLLETVEDHSGYDVPWNPTNLIPFWGGAVHHDFHH-KTFEGPYSSVFTWCDWMFGTDKEFRAH 267
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|698783369|ref|XP_009824728.1| (hypothetical protein H257_02682 [Aphanomyces astaci] >gi|574120778|gb|ETV86256.1| hypothetical protein H257_02682 [Aphanomyces astaci]) HSP 1 Score: 160.229 bits (404), Expect = 1.413e-43 Identity = 87/232 (37.50%), Postives = 136/232 (58.62%), Query Frame = 0
Query: 36 LVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKEHLLRRK 267
++HE+++ + L Y + +VP R ++KIQ+ + T + H+ + +QLP I+ + G + LP+A WQ LV + +F FY HR+ HH S+YKY HK HHE+ +P GI++EYAH +E +++ + T L P++L H L L++WLA+R++ET+D HSG LPW+ LP +AGP+ HDFHH V + DY+FGTD F++ R+
Sbjct: 54 VLHEALYFSIWLPYLALDFVPYFR-KYKIQEAKPNTWAETWRCFKHLVFSHVVVQLPMILSSDWGLRQLGFTFELPLPTASTIAWQCLVSFILEDFYFYWVHRLMHHKSVYKYVHKVHHEYAAPFGIAAEYAHPIETMLLGV-GTFLGPLLLTRHLLTLWVWLAVRLFETIDDHSGYELPWAWSNFLPFWAGPVHHDFHHEKFDGNYASVFTVWDYVFGTDGAFRQSQADRR 283
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|693500082|emb|CEF98134.1| (Fatty acid hydroxylase [Ostreococcus tauri]) HSP 1 Score: 160.999 bits (406), Expect = 1.417e-43 Identity = 84/205 (40.98%), Postives = 123/205 (60.00%), Query Frame = 0
Query: 60 QRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMH-ASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYG-VLGLMDYIFGTDKEFKEH 262
Q+WKIQ+ PS E+ K V+ + +F+QLP + ++ + + G S+ +LP + WQ+ V + +F FY HR HH +YKY HK HHE K P GI++EYAH +E + + TLL P+ H + L++WL R+ ETV+ HSG +PW+P L+P + G + HDFHH T +G Y V D++FGTDKEF+ H
Sbjct: 108 QKWKIQREKRPSAEMVMKCVVKLLKSHVFVQLPMQMMFYFVAPYFGFSLALEALPKSRDFLWQIPVFFVIEDFYFYWIHRFLHHKRVYKYVHKVHHEHKYPFGIAAEYAHPVETFFLGI-GTLLGPLFFAKHMVTLWVWLFFRLLETVEDHSGYDVPWNPTNLIPFWGGAVHHDFHH-KTFEGPYSSVFTWCDWMFGTDKEFRAH 310
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|189026981|emb|CAQ55986.1| (sterol C4 methyloxydase, partial [Aphanomyces euteiches]) HSP 1 Score: 158.688 bits (400), Expect = 2.408e-43 Identity = 87/226 (38.50%), Postives = 133/226 (58.85%), Query Frame = 0
Query: 36 LVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKE 261
++HE+++ + + Y L+ ++P R ++KIQ+ + E T + + H+ +FIQ P I+G + G + LP A WQ + + +F FY HR+ HH S+YKY HKQHHEF +P GI++EYAH +E ++ L T L P++L H L L++WLA+R+ ET+D HSG LPW+ +P +AGP+ HDFHH V + D +F TD F+E
Sbjct: 54 VLHEALYFSIWIPYLLLDFIPYFR-KYKIQQSKPNTWENTWRCLKHLLFNHVFIQFPMILGSDWGLRQLGFTTALPLPHATTIAWQCFMSFILEDFYFYWVHRIMHHKSLYKYVHKQHHEFAAPFGIAAEYAHPVETAVLGL-GTFLGPLLLTRHLLTLWVWLAVRLVETIDDHSGYDLPWAWSNFVPFWAGPVHHDFHHEKFDGNYASVFTIWDNVFWTDTAFRE 277
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|145347275|ref|XP_001418099.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144578327|gb|ABO96392.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 157.532 bits (397), Expect = 6.828e-43 Identity = 94/246 (38.21%), Postives = 137/246 (55.69%), Query Frame = 0
Query: 30 FLAAGTLV---HESIFV---TGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMH-ASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYG-VLGLMDYIFGTDKEFKEHLLRRK 267
F+ AG L HE+++ T L Y +RWKIQ PS E+ K + + +FIQLP + ++ + + G S+ +LP + WQ+ V +F FY HR HH +YKY HK HHE K P GI++EYAH +E + + TLL P+ H + L++WL R+ ETV+ HSG +PW+P L+P + G + HDFHH T +G Y V D++FGTDKEF++H L+ +
Sbjct: 16 FVIAGPLTFAYHEAVYFGAWTPWLAMDQFEYF----KRWKIQPDKTPSKEMVMKCLTKLLKSHVFIQLPMQMMFYFVAPYFGFSLAMEALPKSRDLLWQIPVFFAIEDFYFYWVHRGLHHKRVYKYVHKIHHEHKFPFGIAAEYAHPVETFFLGI-GTLLGPLFFAKHMVTLWVWLFFRLVETVEDHSGYDVPWNPTNLIPFWGGAVHHDFHH-KTFEGPYSSVFTWCDWMFGTDKEFRKHQLKLR 255
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|1199292695|gb|OUS47781.1| (fatty acid hydroxylase superfamily-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 160.229 bits (404), Expect = 2.224e-42 Identity = 84/205 (40.98%), Postives = 123/205 (60.00%), Query Frame = 0
Query: 60 QRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMH-ASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYG-VLGLMDYIFGTDKEFKEH 262
Q+WKIQ+ PS E+ K V+ + +F+QLP + ++ + + G S+ +LP + WQ+ V + +F FY HR HH +YKY HK HHE K P GI++EYAH +E + + TLL P+ H + L++WL R+ ETV+ HSG +PW+P L+P + G + HDFHH T +G Y V D++FGTDKEF+ H
Sbjct: 196 QKWKIQREKRPSAEMVMKCVVKLLKSHVFVQLPMQMMFYFVAPYFGFSLALEALPKSRDFLWQIPVFFVIEDFYFYWIHRFLHHKRVYKYVHKVHHEHKYPFGIAAEYAHPVETFFLGI-GTLLGPLFFAKHMVTLWVWLFFRLLETVEDHSGYDVPWNPTNLIPFWGGAVHHDFHH-KTFEGPYSSVFTWCDWMFGTDKEFRAH 398
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|1111089598|ref|XP_019233626.1| (PREDICTED: methylsterol monooxygenase 2-2-like isoform X2 [Nicotiana attenuata] >gi|1102150526|gb|OIT06802.1| methylsterol monooxygenase 2-2 [Nicotiana attenuata]) HSP 1 Score: 154.836 bits (390), Expect = 4.746e-42 Identity = 89/248 (35.89%), Postives = 138/248 (55.65%), Query Frame = 0
Query: 33 AGTLVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHH--MATTKGAY-GVLGLMDYIFGTDKEFKEHLLRRKHVEMDVNGKK 277
G ++HES+F L + L ++KIQK N S E K + + + L + LP ++G + ++K G LPS + Q++ + +F+FY HR+ H +YK+ H HHE+ +P G++SEYAH E L + +T++ P I G H + LYLW++LR+ ETV+AHSG PWSP LP + G FHD+HH + T G Y MD+IFGTDK +++ +++ + GK+
Sbjct: 25 GGFVLHESVFFLSGLPFILFERAG-WFGKYKIQKK-NNSPEAQEKCITRLLMYHLCVNLPILLGSYPVFKFMGTRSSLPLPSWKVISTQIIFYFILEDFVFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGF-ATIIGPAITGPHLITLYLWVSLRVLETVEAHSGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTDKGYRKLKSLKENERFEAEGKE 269
BLAST of EWM23673.1 vs. NCBI_GenBank
Match: gi|698783367|ref|XP_009824727.1| (hypothetical protein H257_02681 [Aphanomyces astaci] >gi|574120777|gb|ETV86255.1| hypothetical protein H257_02681 [Aphanomyces astaci]) HSP 1 Score: 155.992 bits (393), Expect = 1.069e-41 Identity = 90/251 (35.86%), Postives = 137/251 (54.58%), Query Frame = 0
Query: 11 RYLADLLSRSAVDHGELVTFLAAGTLVHESIFVTGNLCYTLISYVPICRQRWKIQKGVNPSTELTHKAVLHIYLGRLFIQLPAIVGYFCLWKHCGGSMHASLPSAMQCTWQLLVCALGTEFMFYSAHRMFHHPSIYKYFHKQHHEFKSPIGISSEYAHVLEDLIVNLPSTLLPPVILGVHPLVLYLWLALRIWETVDAHSGLALPWSPYYLLPCFAGPLFHDFHHMATTKGAYGVLGLMDYIFGTDKEFKE 261
+Y+ D S ++ G +TF +H+ + + Y L+ + PI ++KIQ + + T+K + + +F+QLP +V K G M A LPS WQ+LV A+ +F Y AHR+ H IYKY HK HHE+ +P GI++EYAH E LI+ + T L P +L H L L++W+ +R+ ++VD+H G LPWSP LP + G + HD+HH + DY+FGTD F++
Sbjct: 55 QYMLDNYSSFTINTG--LTFA-----LHQICYFGTWVPYLLLDFFPIF-HKYKIQPKQDNTWPGTYKCLKLLAFNHVFVQLPMMVSSDNSLKMLGFGMEAPLPSLTTIVWQVLVSAVLEDFYNYWAHRLLHWKRIYKYIHKVHHEYAAPFGITAEYAHPAETLILGI-GTFLGPFLLTRHLLTLWVWMCVRVIQSVDSHCGYELPWSPTRFLPFWGGAVHHDYHHEKFDVNYASFFTVWDYVFGTDGAFRD 296 The following BLAST results are available for this feature:
BLAST of EWM23673.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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