EWM23676.1, cds6980 (CDS) Nannochloropsis gaditana

Overview
NameEWM23676.1
Unique Namecds6980
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:205411..205698 +
Alignment locationCM002470.1:205764..205970 +
Alignment locationCM002470.1:206203..207057 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23676.1
Productprotein pelota
Orig transcript idgnl|cribi|Naga_100030g18.4173.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:205411..205698 +
CM002470.1supercontigCM002470.1:205764..205970 +
CM002470.1supercontigCM002470.1:206203..207057 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0070481nuclear-transcribed mRNA catabolic process, non-stop decay
GO:0070966nuclear-transcribed mRNA catabolic process, no-go decay
GO:0071025RNA surveillance
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR005141eRF1_2
IPR005140eRF1_1_Pelota
IPR005142eRF1_3
IPR029064L30e-like
IPR004405Transl-rel_pelota
Homology
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|585104830|gb|EWM23676.1| (protein pelota [Nannochloropsis gaditana])

HSP 1 Score: 924.08 bits (2387), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPLEIEMEEEDLPLEEAGGAGLGAGGVGGNGAATKVDHGAAAGQENLTGSEGGGKPEEGTEAEETAWAGGDVGVSDAEGMGL 449
            MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPLEIEMEEEDLPLEEAGGAGLGAGGVGGNGAATKVDHGAAAGQENLTGSEGGGKPEEGTEAEETAWAGGDVGVSDAEGMGL
Sbjct:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPLEIEMEEEDLPLEEAGGAGLGAGGVGGNGAATKVDHGAAAGQENLTGSEGGGKPEEGTEAEETAWAGGDVGVSDAEGMGL 449          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|813141290|ref|XP_012198909.1| (translation factor pelota [Saprolegnia parasitica CBS 223.65] >gi|641536383|gb|KDO30272.1| translation factor pelota [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 472.241 bits (1214), Expect = 4.258e-162
Identity = 210/370 (56.76%), Postives = 286/370 (77.30%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ R +S KDG G+V+LR E+PEDMW ++NL+  GD V+TTT RKVVKE ATGSTTS ++R+ L +Q++ + FDP  C+LR+ G N EE+ HV+MGAYHT+DLEL ++FT+ K CWD + L+R+D AC+  KQAE AA+VMQ+GLA++CL+ G MT++R +++  IP+KR GN +H K +++FY ++ +A+ RH++FSLVK VLLASPGFV  DFF F+   A   +DK LL+NKSKF+LCH+SSGHKHAL+EVLT P +Q +L DTKA G+V+ L  FF ML    D+A+YG+NHV  A +  A++TLL++D++FR +D   RR+Y+DLVE V+A GG    FSSLHV+G+KL QL GVAA+LRFPL
Sbjct:    1 MKLLKRSISEKDGNGSVILRAEDPEDMWHVFNLMHRGDTVKTTTVRKVVKEGATGSTTSQRMRMTLCLQMEHIDFDPIKCLLRIRGKNVEENPHVRMGAYHTIDLELNKDFTLAKQCWDVMTLERIDMACNVAKQAEAAAVVMQAGLAHLCLIKGHMTVIRAKLETSIPRKRTGNTSHAKGMERFYDSIVQAIKRHVDFSLVKCVLLASPGFVKDDFFKFMMEYAVRSDDKLLLENKSKFILCHASSGHKHALDEVLTDPKVQVQLEDTKAAGDVKCLETFFEMLHTDQDKAYYGYNHVVKANQQMAIDTLLITDALFRSQDLAVRRKYIDLVENVRANGGHARVFSSLHVSGDKLGQLSGVAALLRFPL 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|669141314|ref|XP_008606219.1| (translation factor pelota [Saprolegnia diclina VS20] >gi|530742278|gb|EQC40520.1| translation factor pelota [Saprolegnia diclina VS20])

HSP 1 Score: 471.47 bits (1212), Expect = 9.866e-162
Identity = 209/370 (56.49%), Postives = 285/370 (77.03%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ R +S KDG G+VVLR E+PEDMW ++NL+  GD V+TTT RKVVKE ATGSTTS ++R+ L +Q++ + FDP  C+LR+ G N EE+ HV+MGAYHT+DLEL ++FT+ K CWD + L+R+D AC+  KQAE AA+VMQ+GLA++CL+ G MT++R +++  IP+KR GN +H K +++FY ++ +A+ RH++FSLVK VLLASPGFV  DF+ F+   A   +DK LL+NK+KF+LCH+SSGHKHAL+EVLT P +Q +L DTKA G+V+ L  FF ML    D+A+YG+NHV  A    A++TLL++D++FR +D   RR+Y+DLVE V+A GG    FSSLHV+G+KL QL GVAA+LRFPL
Sbjct:    1 MKLLKRSISEKDGNGSVVLRAEDPEDMWHVFNLMHRGDTVKTTTVRKVVKEGATGSTTSQRMRMTLCLQMEHIDFDPIKCLLRIRGKNVEENPHVRMGAYHTIDLELNKDFTLAKQCWDVMTLERIDTACNVAKQAEAAAVVMQAGLAHLCLIKGHMTVIRAKLETSIPRKRTGNTSHAKGMERFYDSIVQAIKRHVDFSLVKCVLLASPGFVKDDFYKFMMEYAVRSDDKVLLENKAKFILCHASSGHKHALDEVLTDPKVQVQLEDTKAAGDVKCLETFFEMLHTDQDKAYYGYNHVVKANTQMAIDTLLITDALFRSQDLAVRRKYIDLVENVRANGGHVRVFSSLHVSGDKLGQLSGVAALLRFPL 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|1173955789|gb|OQS02706.1| (pelota [Thraustotheca clavata])

HSP 1 Score: 469.159 bits (1206), Expect = 7.254e-161
Identity = 207/370 (55.95%), Postives = 287/370 (77.57%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ R+++ KDG G+VVLR E+PEDMW ++NL+ +GD V+TTT RKV+KE ATGSTTS ++R+ L++Q++ + FDP  C+LR+ G N EE+ HV+MGAYHT+DLE+ ++FT+ K CWD + L+R+D AC+  KQAE AA+VMQ+GLA++CL+ G MT++R +++  IP+KR GN AH K ++KFY ++ +A+ RH++F+LVK VLLASPGFV  DF  F+   A   +DK LL+NKSKF+LCH+SSGHKHAL+EVLT P +  +L DTKA G+V+ L  FF ML    D+A+YG+NHV  A +  A+ETLL++D++FR +D   RR+YVDLVE V+  GG+   FSSLHV+G+KL QL G+AA+LRFPL
Sbjct:    1 MKLLKRNINEKDGNGSVVLRAEDPEDMWHVFNLMHKGDTVKTTTVRKVIKEGATGSTTSQRVRMTLSLQMEHIDFDPAKCLLRIRGKNVEENPHVRMGAYHTIDLEMNKDFTLSKQCWDLMTLERIDTACNVAKQAEAAAVVMQAGLAHLCLIKGHMTVIRAKLEASIPRKRTGNTAHAKGMEKFYDSIVQAIKRHVDFTLVKCVLLASPGFVKDDFHKFMMEYAIRTDDKVLLENKSKFILCHASSGHKHALDEVLTDPKVLVQLEDTKAAGDVKCLESFFEMLHTDQDKAYYGYNHVVKANQQMAIETLLITDALFRSQDIATRRKYVDLVESVRGNGGQVRVFSSLHVSGDKLGQLSGIAALLRFPL 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|953487014|emb|CEG49076.1| (mrna surveillance protein pelota [Plasmopara halstedii])

HSP 1 Score: 468.003 bits (1203), Expect = 4.360e-160
Identity = 213/378 (56.35%), Postives = 288/378 (76.19%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPLEIEMEEED 378
            +KL+ + +S KD AG V+LR EEPEDMW IYNLI   DLV+TTT RKVVKE  TGST+S ++R+ L I+V+++ FDP  CVLR+ G N  ES+HV++GAYHTLDLE+ R+FT+ K CWD + L+R++ ACD  KQAE+AA+VMQSGLA++CL+ G MT++R RI++ +PKKR GN AH K I++FY  +  ++ +HI+F LVK V+LASPGFV  +F+ F+   A   +DK +L+NK KFVLCHSSSGHKHAL+EVL+ P IQ+ +ADTKAV +V+ L  FF ML    DRA+YG+ HV  A  + A+ETL++SD++FR +D   RR+YV++VE V+  GG    FSS+HV+GEKL Q+ G+AAILRFP+  E++EED
Sbjct:    9 IKLLKKQISEKDSAGFVILRAEEPEDMWHIYNLIHVSDLVKTTTIRKVVKEGVTGSTSSQRVRMTLQIEVEQVNFDPALCVLRIKGKNIMESQHVRLGAYHTLDLEMNRDFTLTKNCWDVMSLERINIACDVTKQAELAAVVMQSGLAHLCLIKGDMTVIRARIEISVPKKRPGNSAHAKGIERFYENIVRSIRQHIDFKLVKCVILASPGFVKDNFYKFMLEHAVRHDDKIILENKQKFVLCHSSSGHKHALDEVLSDPSIQSHVADTKAVEDVKCLEQFFNMLHIDQDRAYYGYKHVIRANSNMAIETLMISDALFRSQDIATRRKYVEIVESVRDNGGTVRLFSSMHVSGEKLGQVSGIAAILRFPMP-EIDEED 385          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|570319410|gb|ETO67358.1| (mRNA surveillance protein pelota [Phytophthora parasitica P1976])

HSP 1 Score: 466.463 bits (1199), Expect = 7.239e-160
Identity = 213/370 (57.57%), Postives = 283/370 (76.49%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ + +S KDGAG+VVLR EEPEDMW IYNLI   D V+TTT RKVVKE  TGST+S ++R+ L I+V+++ FDP  CVLR+ G N  ES+HV++GAYHTLDLE+ R+FT+ K CWD + L+R++ ACD  KQAE+AA+VMQ GLA++CL+ G MT++R +I+  +PKKR G+ AH K  +KFY  +  ++ +HI+F LVK VLLASPGFV  DFF F+  +A  ++DK +L+NK KFVLCHSSSGHKHAL+EVL  P IQ+++ADTKAV +V+ L  FF ML    DRA+YG+ HV+ A  + A+ETL+++D++FR +D   RR+YVDLVE V+  GG    FSSLHV+GEKL Q+ G+AAILRFP+
Sbjct:    1 MKLLKKQISEKDGAGSVVLRAEEPEDMWHIYNLIHVSDSVKTTTIRKVVKEGVTGSTSSQRVRMTLQIEVEQVNFDPALCVLRIKGKNIMESQHVRLGAYHTLDLEMNRDFTLTKNCWDVMSLERIEMACDITKQAELAAVVMQVGLAHLCLIKGDMTVIRAKIETSVPKKRPGSSAHAKGTEKFYENIVRSIRQHIDFKLVKCVLLASPGFVKDDFFKFMIEQAVRQDDKLILENKPKFVLCHSSSGHKHALDEVLNDPAIQSQVADTKAVEDVKCLERFFNMLHIDQDRAYYGYKHVERANSNMAIETLMITDALFRSQDIATRRKYVDLVESVRDNGGTVRLFSSLHVSGEKLGQVSGIAAILRFPM 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|675172821|ref|XP_008895295.1| (mRNA surveillance protein pelota [Phytophthora parasitica INRA-310] >gi|566015676|gb|ETI38587.1| mRNA surveillance protein pelota [Phytophthora parasitica P1569] >gi|567953131|gb|ETK78790.1| mRNA surveillance protein pelota [Phytophthora parasitica] >gi|567981784|gb|ETL32220.1| mRNA surveillance protein pelota [Phytophthora parasitica] >gi|568011299|gb|ETL85477.1| mRNA surveillance protein pelota [Phytophthora parasitica] >gi|568041202|gb|ETM38621.1| mRNA surveillance protein pelota [Phytophthora parasitica] >gi|568104799|gb|ETN19444.1| mRNA surveillance protein pelota [Phytophthora parasitica INRA-310] >gi|570943237|gb|ETP08494.1| mRNA surveillance protein pelota [Phytophthora parasitica CJ01A1] >gi|570974059|gb|ETP36534.1| mRNA surveillance protein pelota [Phytophthora parasitica P10297] >gi|570974060|gb|ETP36535.1| mRNA surveillance protein pelota, variant [Phytophthora parasitica P10297] >gi|970635366|gb|KUF80268.1| pelota protein [Phytophthora nicotianae])

HSP 1 Score: 466.463 bits (1199), Expect = 9.104e-160
Identity = 213/370 (57.57%), Postives = 283/370 (76.49%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ + +S KDGAG+VVLR EEPEDMW IYNLI   D V+TTT RKVVKE  TGST+S ++R+ L I+V+++ FDP  CVLR+ G N  ES+HV++GAYHTLDLE+ R+FT+ K CWD + L+R++ ACD  KQAE+AA+VMQ GLA++CL+ G MT++R +I+  +PKKR G+ AH K  +KFY  +  ++ +HI+F LVK VLLASPGFV  DFF F+  +A  ++DK +L+NK KFVLCHSSSGHKHAL+EVL  P IQ+++ADTKAV +V+ L  FF ML    DRA+YG+ HV+ A  + A+ETL+++D++FR +D   RR+YVDLVE V+  GG    FSSLHV+GEKL Q+ G+AAILRFP+
Sbjct:    1 MKLLKKQISEKDGAGSVVLRAEEPEDMWHIYNLIHVSDSVKTTTIRKVVKEGVTGSTSSQRVRMTLQIEVEQVNFDPALCVLRIKGKNIMESQHVRLGAYHTLDLEMNRDFTLTKNCWDVMSLERIEMACDITKQAELAAVVMQVGLAHLCLIKGDMTVIRAKIETSVPKKRPGSSAHAKGTEKFYENIVRSIRQHIDFKLVKCVLLASPGFVKDDFFKFMIEQAVRQDDKLILENKPKFVLCHSSSGHKHALDEVLNDPAIQSQVADTKAVEDVKCLERFFNMLHIDQDRAYYGYKHVERANANMAIETLMITDALFRSQDIATRRKYVDLVESVRDNGGTVRLFSSLHVSGEKLGQVSGIAAILRFPM 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|1173946699|gb|OQR95204.1| (protein pelota [Achlya hypogyna])

HSP 1 Score: 466.077 bits (1198), Expect = 1.113e-159
Identity = 207/370 (55.95%), Postives = 287/370 (77.57%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ R +S KDG G+VVLR E+PEDMW ++NL+ +GD V+TTT RKV+KE  TGSTTS ++R+ L ++++ + FDP  C+LR+ G N EE+ HV+MGAYHT+DLEL ++FT+ K CWD + L+R+D AC+  KQAE AA+VMQ+GLA++CL+ G MT++R +++  IP+KRAGN +H K +++FY ++ +A+ RH++F+LVK VLLASPGFV  DF  F+   A   +DK LL+NKSKF+LCH+SSGHKHAL+EVLT P +Q++L DTKA G+V+ L  FF ML    D+A+YG+NHV  A    A++TLL++D++FR ++   RR+YVDLVE V+A GG+   FSSLHV+G+KL QL GVAA+LRFPL
Sbjct:    1 MKLLKRSISEKDGTGSVVLRAEDPEDMWHVFNLMHKGDTVKTTTVRKVIKEGTTGSTTSQRVRMTLCLEMEHIDFDPAKCLLRIRGKNVEENPHVRMGAYHTIDLELSKDFTLAKQCWDLMSLERIDTACNVAKQAEAAAVVMQAGLAHVCLIKGHMTVIRAKLETSIPRKRAGNTSHAKGMERFYDSIVQAIKRHVDFALVKCVLLASPGFVKDDFHKFMMEYALRADDKVLLENKSKFILCHASSGHKHALDEVLTDPKVQSQLEDTKAAGDVKCLEAFFEMLHTDQDKAYYGYNHVVKANGQMAIDTLLITDALFRSQEIAVRRKYVDLVEAVRANGGQVRVFSSLHVSGDKLGQLSGVAALLRFPL 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|301115440|ref|XP_002905449.1| (protein pelota [Phytophthora infestans T30-4] >gi|262110238|gb|EEY68290.1| protein pelota [Phytophthora infestans T30-4])

HSP 1 Score: 465.692 bits (1197), Expect = 1.854e-159
Identity = 213/370 (57.57%), Postives = 282/370 (76.22%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MKL+ + ++ KDGAG+VVLR EEPEDMW IYNLI   D V+TTT RKVVKE  TGST+S ++R+ L I+V+++ FDP  CVLR+ G N  ES+HV++GAYHTLDLE+ R+FT+ K CWD + L+R++ ACD  KQAE+AA+VMQ GLA++CL+ G MT++R +I+  +PKKR GN AH K  +KFY  +  ++ +HI+F LVK VLLASPGFV  DFF F+  +A  ++DK +L+NK KFVLCHSSSGHKHAL+EVL+ P IQ ++ADTKAV +V+ L  FF ML    DRA+YG+ HV  A  + A+ETL+++D++FR +D   RR+YVDLVE V+  GG    FSSLHV+GEKL Q+ G+AAILRFP+
Sbjct:    1 MKLLKKQINEKDGAGSVVLRAEEPEDMWHIYNLIHVSDSVKTTTIRKVVKEGVTGSTSSQRVRMTLHIEVEQVNFDPALCVLRIKGKNIMESQHVRLGAYHTLDLEMNRDFTLTKNCWDVMSLERIEMACDITKQAELAAVVMQVGLAHLCLIKGDMTVIRAKIETSVPKKRPGNSAHAKGTEKFYENIVRSIRQHIDFKLVKCVLLASPGFVKDDFFKFMIEQAVRQDDKLILENKPKFVLCHSSSGHKHALDEVLSDPAIQMQVADTKAVEDVKCLERFFNMLHIDQDRAYYGYKHVVQANANMAIETLMITDALFRSQDIATRRKYVDLVESVRENGGTVRLFSSLHVSGEKLGQVSGIAAILRFPM 370          
BLAST of EWM23676.1 vs. NCBI_GenBank
Match: gi|298714761|emb|CBJ25660.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 456.447 bits (1173), Expect = 5.940e-156
Identity = 211/370 (57.03%), Postives = 279/370 (75.41%), Query Frame = 0
Query:    1 MKLVSRDVSGKDGAGTVVLRPEEPEDMWAIYNLISEGDLVRTTTFRKVVKESATGSTTSNKIRLNLTIQVQRMQFDPDTCVLRLSGPNREESEHVKMGAYHTLDLELQRNFTIQKTCWDTVVLDRLDDACDPVKQAEVAAIVMQSGLANICLLTGSMTLVRQRIDMPIPKKRAGNVAHDKAIQKFYRAVYEAVTRHINFSLVKAVLLASPGFVNSDFFAFLNSEAQLKEDKSLLQNKSKFVLCHSSSGHKHALEEVLTQPGIQARLADTKAVGEVQALGDFFAMLSAQPDRAHYGFNHVQVAAEHDAVETLLMSDSIFRGRDFLARRRYVDLVEGVKAKGGRFLCFSSLHVTGEKLHQLGGVAAILRFPL 370
            MK++ R +S KDG G V ++ EE EDMW  YNLI++GD        +VV ES+TGSTTS ++RL+LTI V+R+ FD D+C+LRLSG N EE+ HVK+GAYHTLDLEL + F+I+K  WD + L+R++ + DP K+AEVAA+VM  GLA++CL+T  MT+ R RI+M IP+KRAG+  H KAI +FY AVY+A+ RH+NF  +K +LL SPGFV  DFF FLN EA  +E++ L++NKSKFVL H+SSGHKHA+EE+L+QP +Q RLADTKA  E++AL  FF ML   PDRA+YG+NHV  A E  AV++LL++D +FR  D   R++YV LVE  K +G +   FSS+HVTGE+L QL G+AA+LRFPL
Sbjct:    1 MKVLRRQISSKDGDGFVQMKTEEAEDMWHAYNLIADGD--------RVVNESSTGSTTSKRVRLSLTIAVERVDFDSDSCLLRLSGRNSEENPHVKIGAYHTLDLELNQVFSIEKDVWDLIHLERIETSSDPTKKAEVAAVVMTGGLAHVCLVTSHMTVTRARIEMNIPRKRAGSSDHQKAISRFYEAVYQAIVRHVNFQQIKCLLLGSPGFVKDDFFEFLNLEAVRREERVLIENKSKFVLVHASSGHKHAVEEILSQPAVQTRLADTKASEEIRALATFFDMLKKDPDRAYYGYNHVSRANEELAVDSLLVTDGLFRSSDLQTRKKYVGLVEAAKDRGAKVFVFSSMHVTGEQLGQLTGIAAVLRFPL 362          
The following BLAST results are available for this feature:
BLAST of EWM23676.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104830|gb|EWM23676.1|0.000e+0100.00protein pelota [Nannochloropsis gaditana][more]
gi|813141290|ref|XP_012198909.1|4.258e-16256.76translation factor pelota [Saprolegnia parasitica ... [more]
gi|669141314|ref|XP_008606219.1|9.866e-16256.49translation factor pelota [Saprolegnia diclina VS2... [more]
gi|1173955789|gb|OQS02706.1|7.254e-16155.95pelota [Thraustotheca clavata][more]
gi|953487014|emb|CEG49076.1|4.360e-16056.35mrna surveillance protein pelota [Plasmopara halst... [more]
gi|570319410|gb|ETO67358.1|7.239e-16057.57mRNA surveillance protein pelota [Phytophthora par... [more]
gi|675172821|ref|XP_008895295.1|9.104e-16057.57mRNA surveillance protein pelota [Phytophthora par... [more]
gi|1173946699|gb|OQR95204.1|1.113e-15955.95protein pelota [Achlya hypogyna][more]
gi|301115440|ref|XP_002905449.1|1.854e-15957.57protein pelota [Phytophthora infestans T30-4] >gi|... [more]
gi|298714761|emb|CBJ25660.1|5.940e-15657.03conserved unknown protein [Ectocarpus siliculosus][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6996rna6996Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications