EWM23736.1, cds6937 (CDS) Nannochloropsis gaditana

Overview
NameEWM23736.1
Unique Namecds6937
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:94799..95002 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23736.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_104402g1.6629.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:94799..95002 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23736.1 vs. NCBI_GenBank
Match: gi|585104913|gb|EWM23736.1| (hypothetical protein Naga_104402g1 [Nannochloropsis gaditana])

HSP 1 Score: 135.191 bits (339), Expect = 2.309e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MLRNSSSPPTLSLVYPPSLPPARPSSFSQVRVDSCRFLAIFLGYSHWIFPRNPCLRLQRVGREGGRE 67
            MLRNSSSPPTLSLVYPPSLPPARPSSFSQVRVDSCRFLAIFLGYSHWIFPRNPCLRLQRVGREGGRE
Sbjct:    1 MLRNSSSPPTLSLVYPPSLPPARPSSFSQVRVDSCRFLAIFLGYSHWIFPRNPCLRLQRVGREGGRE 67
The following BLAST results are available for this feature:
BLAST of EWM23736.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104913|gb|EWM23736.1|2.309e-40100.00hypothetical protein Naga_104402g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6953rna6953Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications