EWM29981.1, cds693 (CDS) Nannochloropsis gaditana

Overview
NameEWM29981.1
Unique Namecds693
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:173952..174343 +
Alignment locationCM002456.1:174580..174943 +
Alignment locationCM002456.1:175335..175346 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29981.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101042g1.10361.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:173952..174343 +
CM002456.1supercontigCM002456.1:174580..174943 +
CM002456.1supercontigCM002456.1:175335..175346 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0065009regulation of molecular function
GO:0009987cellular process
GO:0006810transport
GO:0006629lipid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Homology
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|585112588|gb|EWM29981.1| (hypothetical protein Naga_101042g1 [Nannochloropsis gaditana])

HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
Query:    1 MTGIPSAITINTTGNSSSLPHVGVPHLSHAGSSNANLLTDEQLFRTDEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLSMPAYDEGGWQIGI 255
            MTGIPSAITINTTGNSSSLPHVGVPHLSHAGSSNANLLTDEQLFRTDEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLSMPAYDEGGWQIGI
Sbjct:    1 MTGIPSAITINTTGNSSSLPHVGVPHLSHAGSSNANLLTDEQLFRTDEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLSMPAYDEGGWQIGI 255          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|695379876|ref|XP_009516654.1| (hypothetical protein PHYSODRAFT_466824 [Phytophthora sojae] >gi|348689565|gb|EGZ29379.1| hypothetical protein PHYSODRAFT_466824 [Phytophthora sojae])

HSP 1 Score: 167.548 bits (423), Expect = 5.968e-44
Identity = 83/197 (42.13%), Postives = 122/197 (61.93%), Query Frame = 0
Query:   46 TDEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
             DE ++EYLLFRGFTKS  VF  +R+ DR + FDVD++++ +   V+ Y I+ +L  W+FL  R F+HLD  +A  L +++ SLLR YVV AI++  R+KA EF   + L +   ++S  +   S + S               W +WF+LP++  P  DP F VFFS SW +AF  SFRN L+++F +LP+PKLL+
Sbjct:   10 VDELVMEYLLFRGFTKSFQVFSAERKRDRARGFDVDQIISQLLVAVQMYQIESVLETWKFLTARFFNHLDASYASTLQQLETSLLRLYVVNAIKTGHREKAAEF---FQLHADKLNASVAAHGGSGADS---------------WSRWFILPYIEHPESDPYFQVFFSQSWLEAFVTSFRNFLSLVFRNLPLPKLLA 188          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|953503518|emb|CEG35528.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 166.777 bits (421), Expect = 1.415e-43
Identity = 78/196 (39.80%), Postives = 122/196 (62.24%), Query Frame = 0
Query:   47 DEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            DE ++EYLLFRGFTKS  VF  +R+ DR + FDVD++++H+   +++Y ++ +L  W+FL  R F+HLD  +A  L +++ SLLR YV+ A+++  R+KA+EF   Y  +  +S +  ++ A S                   W +WF+LP++  P  D  F VFF  SW +AF  SFRN L+++F +LP+PKLL+
Sbjct:   11 DELVMEYLLFRGFTKSFQVFNAERKRDRTRGFDVDQIISHLLQSIQNYQVETVLETWKFLTARFFNHLDASYALTLQQLETSLLRLYVINAVKNGHREKAVEFFQFYADELNTSVAVQSNGAHS-------------------WSRWFILPYIEHPESDAYFQVFFGQSWLEAFVSSFRNFLSLVFRNLPLPKLLA 187          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|1043405112|gb|OCA17846.1| (hypothetical protein XENTR_v900265571mg, partial [Xenopus tropicalis])

HSP 1 Score: 158.303 bits (399), Expect = 5.917e-43
Identity = 78/197 (39.59%), Postives = 111/197 (56.35%), Query Frame = 0
Query:   46 TDEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            TD+ + EYL FRGFT ++  FEVD + D+ K F VD+++  +   V+SYD+ GL+  W +L+RRLFS L+  +   ++K+K SL RYY+VY IQS+R DKA EF      +                            +  A W++WF LP LP P  +  F  +FS  WAD F VS  N L+V+F  +PVPK+L+
Sbjct:    8 TDDLVKEYLTFRGFTNTLKYFEVDIKADKDKGFCVDRIVEQLLQFVQSYDLNGLVEYWAYLERRLFSRLEDVYRPTIHKLKTSLFRYYLVYTIQSSRTDKAHEFFQKQATE---------------------------LQNQAEWKEWFALPFLPTPDSNRTFSTYFSRQWADTFTVSLHNFLSVLFQCMPVPKILT 177          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|301105154|ref|XP_002901661.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100665|gb|EEY58717.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 162.925 bits (411), Expect = 2.161e-42
Identity = 79/196 (40.31%), Postives = 122/196 (62.24%), Query Frame = 0
Query:   47 DEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            DE ++EYLLFRGFTKS  VF  +R+ DR + FDV+++++ +   V++Y I+ +L  W+F   R F+HLD  +A  L++++ SLLR YVV A++S  R+KA EF   + L +   ++S+ +  +   S                W +WF+LP++  P  D  F VFFS +W +AF  SFRN L+++F SLP+PKLL+
Sbjct:   11 DELVMEYLLFRGFTKSFQVFSAERKRDRSRGFDVEQIISQLLVAVQTYQIETVLETWKFFTARFFNHLDASYASTLHQLETSLLRLYVVNAVKSGHREKAAEF---FQLHADKLNASAAAQGAGTDS----------------WSRWFILPYIERPESDAYFQVFFSQAWLEAFVTSFRNFLSLVFRSLPLPKLLA 187          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|568026952|gb|ETM00922.1| (hypothetical protein L917_02418 [Phytophthora parasitica])

HSP 1 Score: 162.925 bits (411), Expect = 2.725e-42
Identity = 80/196 (40.82%), Postives = 121/196 (61.73%), Query Frame = 0
Query:   47 DEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            DE ++EYLLFRGFTKS  VF  +R+ DR + FDV+++++ +   V++Y I+ +L  W+FL  R F+HLD  +A  L +++ SLLR YVV A++S  R+KA EF   + L +   ++S T+  +   S                W +WF+LP++  P  DP F VFF   W +AF  SFRN L+++F +LP+PKLL+
Sbjct:   11 DELVMEYLLFRGFTKSFQVFSAERKRDRSRGFDVEQIISQLLVAVQTYQIETVLETWKFLTARFFNHLDASYASTLQQLETSLLRLYVVNAVKSGHREKAAEF---FQLHADKLNASVTAQGAGTDS----------------WSRWFILPYIEHPESDPYFQVFFGQLWLEAFVTSFRNFLSLVFRNLPLPKLLA 187          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|970635155|gb|KUF80135.1| (WD repeat-containing protein 91 [Phytophthora nicotianae])

HSP 1 Score: 162.925 bits (411), Expect = 2.892e-42
Identity = 80/196 (40.82%), Postives = 121/196 (61.73%), Query Frame = 0
Query:   47 DEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            DE ++EYLLFRGFTKS  VF  +R+ DR + FDV+++++ +   V++Y I+ +L  W+FL  R F+HLD  +A  L +++ SLLR YVV A++S  R+KA EF   + L +   ++S T+  +   S                W +WF+LP++  P  DP F VFF   W +AF  SFRN L+++F +LP+PKLL+
Sbjct:   11 DELVMEYLLFRGFTKSFQVFSAERKRDRSRGFDVEQIISQLLVAVQTYQIETVLETWKFLTARFFNHLDASYASTLQQLETSLLRLYVVNAVKSGHREKAAEF---FQLHADKLNASVTAQGAGTDS----------------WSRWFILPYIEHPESDPYFQVFFGQLWLEAFVTSFRNFLSLVFRNLPLPKLLA 187          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|675214069|ref|XP_008915919.1| (hypothetical protein PPTG_19327 [Phytophthora parasitica INRA-310] >gi|566031651|gb|ETI54562.1| hypothetical protein F443_02627 [Phytophthora parasitica P1569] >gi|567969338|gb|ETK94432.1| hypothetical protein L915_02512 [Phytophthora parasitica] >gi|567997729|gb|ETL47808.1| hypothetical protein L916_02483 [Phytophthora parasitica] >gi|568057431|gb|ETM54098.1| hypothetical protein L914_02507 [Phytophthora parasitica] >gi|568083823|gb|ETM98780.1| hypothetical protein PPTG_19327 [Phytophthora parasitica INRA-310] >gi|570335371|gb|ETO83319.1| hypothetical protein F444_02628 [Phytophthora parasitica P1976] >gi|570959415|gb|ETP24394.1| hypothetical protein F441_02590 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 162.925 bits (411), Expect = 2.921e-42
Identity = 80/196 (40.82%), Postives = 121/196 (61.73%), Query Frame = 0
Query:   47 DEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            DE ++EYLLFRGFTKS  VF  +R+ DR + FDV+++++ +   V++Y I+ +L  W+FL  R F+HLD  +A  L +++ SLLR YVV A++S  R+KA EF   + L +   ++S T+  +   S                W +WF+LP++  P  DP F VFF   W +AF  SFRN L+++F +LP+PKLL+
Sbjct:   11 DELVMEYLLFRGFTKSFQVFSAERKRDRSRGFDVEQIISQLLVAVQTYQIETVLETWKFLTARFFNHLDASYASTLQQLETSLLRLYVVNAVKSGHREKAAEF---FQLHADKLNASVTAQGAGTDS----------------WSRWFILPYIEHPESDPYFQVFFGQLWLEAFVTSFRNFLSLVFRNLPLPKLLA 187          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|570995538|gb|ETP52368.1| (hypothetical protein F442_02606 [Phytophthora parasitica P10297])

HSP 1 Score: 161.77 bits (408), Expect = 7.061e-42
Identity = 80/196 (40.82%), Postives = 120/196 (61.22%), Query Frame = 0
Query:   47 DEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            DE ++EYLLFRGFTKS  VF  +R+ DR + FDV+++++ +   V++Y I+ +L  W+FL  R F+HLD  +A  L +++ SLLR YVV A++S  R+KA EF   + L +   + S T+  +   S                W +WF+LP++  P  DP F VFF   W +AF  SFRN L+++F +LP+PKLL+
Sbjct:   11 DELVMEYLLFRGFTKSFQVFSAERKRDRSRGFDVEQIISQLLVAVQTYQIETVLETWKFLTARFFNHLDASYASTLQQLETSLLRLYVVNAVKSGHREKAAEF---FQLHADKLNVSVTAQGAGTDS----------------WSRWFILPYIEHPESDPYFQVFFGQLWLEAFVTSFRNFLSLVFRNLPLPKLLA 187          
BLAST of EWM29981.1 vs. NCBI_GenBank
Match: gi|1062798828|ref|XP_017945366.1| (PREDICTED: WD repeat-containing protein 91 isoform X1 [Xenopus tropicalis] >gi|1062798832|ref|XP_017945367.1| PREDICTED: WD repeat-containing protein 91 isoform X1 [Xenopus tropicalis] >gi|1062798840|ref|XP_017945368.1| PREDICTED: WD repeat-containing protein 91 isoform X1 [Xenopus tropicalis])

HSP 1 Score: 159.844 bits (403), Expect = 4.453e-41
Identity = 78/197 (39.59%), Postives = 111/197 (56.35%), Query Frame = 0
Query:   46 TDEDIIEYLLFRGFTKSMAVFEVDRREDRLKAFDVDKLLAHINGLVRSYDIQGLLRLWEFLDRRLFSHLDVHHARELYKMKVSLLRYYVVYAIQSNRRDKAIEFLANYTLQSASSSSSSTSPASSPSSSTTPFPPQILTETDAAWRQWFVLPHLPEPSRDPQFHVFFSSSWADAFRVSFRNVLTVIFYSLPVPKLLS 242
            TD+ + EYL FRGFT ++  FEVD + D+ K F VD+++  +   V+SYD+ GL+  W +L+RRLFS L+  +   ++K+K SL RYY+VY IQS+R DKA EF      +                            +  A W++WF LP LP P  +  F  +FS  WAD F VS  N L+V+F  +PVPK+L+
Sbjct:    8 TDDLVKEYLTFRGFTNTLKYFEVDIKADKDKGFCVDRIVEQLLQFVQSYDLNGLVEYWAYLERRLFSRLEDVYRPTIHKLKTSLFRYYLVYTIQSSRTDKAHEFFQKQATE---------------------------LQNQAEWKEWFALPFLPTPDSNRTFSTYFSRQWADTFTVSLHNFLSVLFQCMPVPKILT 177          
The following BLAST results are available for this feature:
BLAST of EWM29981.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112588|gb|EWM29981.1|0.000e+0100.00hypothetical protein Naga_101042g1 [Nannochloropsi... [more]
gi|695379876|ref|XP_009516654.1|5.968e-4442.13hypothetical protein PHYSODRAFT_466824 [Phytophtho... [more]
gi|953503518|emb|CEG35528.1|1.415e-4339.80Uncharacterized conserved protein [Plasmopara hals... [more]
gi|1043405112|gb|OCA17846.1|5.917e-4339.59hypothetical protein XENTR_v900265571mg, partial [... [more]
gi|301105154|ref|XP_002901661.1|2.161e-4240.31conserved hypothetical protein [Phytophthora infes... [more]
gi|568026952|gb|ETM00922.1|2.725e-4240.82hypothetical protein L917_02418 [Phytophthora para... [more]
gi|970635155|gb|KUF80135.1|2.892e-4240.82WD repeat-containing protein 91 [Phytophthora nico... [more]
gi|675214069|ref|XP_008915919.1|2.921e-4240.82hypothetical protein PPTG_19327 [Phytophthora para... [more]
gi|570995538|gb|ETP52368.1|7.061e-4240.82hypothetical protein F442_02606 [Phytophthora para... [more]
gi|1062798828|ref|XP_017945366.1|4.453e-4139.59PREDICTED: WD repeat-containing protein 91 isoform... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna693rna693Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications