EWM23750.1, cds6923 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|585104943|gb|EWM23750.1| (hypothetical protein Naga_101493g1 [Nannochloropsis gaditana]) HSP 1 Score: 905.975 bits (2340), Expect = 0.000e+0 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0 Query: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSVAPFCRDCAITNTTCADTGGNYLGFFPNTTTPEACSTQCQTFFPGFVSWFGLLTASELFNTAPCEWLGHLSCAAPL 451 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSVAPFCRDCAITNTTCADTGGNYLGFFPNTTTPEACSTQCQTFFPGFVSWFGLLTASELFNTAPCEWLGHLSCAAPL Sbjct: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSVAPFCRDCAITNTTCADTGGNYLGFFPNTTTPEACSTQCQTFFPGFVSWFGLLTASELFNTAPCEWLGHLSCAAPL 451
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|585099547|gb|EWM20154.1| (hypothetical protein Naga_101486g1 [Nannochloropsis gaditana]) HSP 1 Score: 876.315 bits (2263), Expect = 0.000e+0 Identity = 439/454 (96.70%), Postives = 444/454 (97.80%), Query Frame = 0 Query: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLAT---SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSVAPFCRDCAITNTTCADTGGNYLGFFPNTTTPEACSTQCQTFFPGFVSWFGLLTASELFNTAPCEWLGHLSCAAPL 451 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEI+QYDPVNK+TRL+QDTGLTKFQGSNAFAFD VRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITE GSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIA+QTSTKQLYLAT SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQ+YVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTASPTRAPTGQPTSTPTATPTFSPSASPS VGPTVTPTPAPTS PTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSVAPFCRDCAITNTTCADTGGNYLGFFPNTTTPEACSTQCQTFFPGFVSWFGLL ASELFN APCEWLGHLSCAAPL Sbjct: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIVQYDPVNKVTRLIQDTGLTKFQGSNAFAFDGVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITERGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAIQTSTKQLYLATNEFSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQQYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTASPTRAPTGQPTSTPTATPTFSPSASPSIVGPTVTPTPAPTSSGPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSVAPFCRDCAITNTTCADTGGNYLGFFPNTTTPEACSTQCQTFFPGFVSWFGLLIASELFNPAPCEWLGHLSCAAPL 454
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|553193193|ref|XP_005855729.1| (hypothetical protein NGA_0661400 [Nannochloropsis gaditana CCMP526] >gi|422293331|gb|EKU20631.1| hypothetical protein NGA_0661400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTA 291 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTA Sbjct: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDATNPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTA 291
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|585103581|gb|EWM22905.1| (hypothetical protein Naga_100764g3 [Nannochloropsis gaditana]) HSP 1 Score: 430.254 bits (1105), Expect = 8.222e-144 Identity = 213/297 (71.72%), Postives = 246/297 (82.83%), Query Frame = 0 Query: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLAT-SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTAS 292 MLC KMRT+P L FLVG+LALS SAAPAFMYGID NEI++YDPVNK+TR+V++T L + +GSNAFAFDE RNQMFWLY+GD + N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+GGSTVNFLPITYD SGNP GV +IQR I+GP FSP FM FGDIA++TST LYLAT + G+F+KIDL +AF Q LPYTEIKTGN LQ+AFDCEE ILYGQ+ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T S Sbjct: 1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQTTS 295
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|553177379|ref|XP_005852464.1| (hypothetical protein NGA_0695300 [Nannochloropsis gaditana CCMP526] >gi|422296069|gb|EKU23368.1| hypothetical protein NGA_0695300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 381.333 bits (978), Expect = 2.625e-127 Identity = 193/276 (69.93%), Postives = 219/276 (79.35%), Query Frame = 0 Query: 18 MLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLATS-NGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTG-SDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSP 288 MLA+S SAAPAFMYGID NEII+YDPVNK+TR+V++T L K GSNAF FDE RNQMFW Y+GD T N AGLYYWDQVTG IDRIASQ Q+W NQRFP NA +Y DPSTG SYFVW+T GGSTVNFLPITYD S NP GVG+ IQRTI+GP FSP M FGDIA++TST LYLAT+ G F+KIDL +AF Q LPYTEI GNP LQ+AFDCEE ILYGQ+ + + SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP Sbjct: 1 MLAVSITSAAPAFMYGIDSFNEIIEYDPVNKVTRVVKETDLNKRSGSNAFGFDEARNQMFWFYKGDKTGGPNLAGLYYWDQVTGAIDRIASQEQSWTNQRFPLNADFYPDPSTGNSYFVWVTGGGSTVNFLPITYDVSDNPIGVGSRIQRTITGPDFSPDSMNFGDIAIKTSTDTLYLATALEGGFAKIDLDDAFEQPTLPYTEITRGNPPLQVAFDCEEEILYGQQLIRPNNNFSDNWYTIDLETGVATSIPDYSTTG-RLSAFDLGGSACSASP 275
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|553191383|ref|XP_005855371.1| (hypothetical protein NGA_0118200 [Nannochloropsis gaditana CCMP526] >gi|422293689|gb|EKU20989.1| hypothetical protein NGA_0118200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 116.701 bits (291), Expect = 4.060e-28 Identity = 56/80 (70.00%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 176 MRFGDIAVQTSTKQLYLATSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYVATDTGSDNWYTIN 255 MRFGDIA++TST LYLAT G+F+KIDL +AF Q LPYTEIKTGNPSLQLAFDCEE ILYGQ + + D DNW TI+ Sbjct: 1 MRFGDIAIKTSTDMLYLATVFGQFAKIDLDDAFEQPTLPYTEIKTGNPSLQLAFDCEEEILYGQAFDSADVTVDNWPTIS 80
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|909705838|ref|WP_049949039.1| (hypothetical protein [Lachnospiraceae bacterium V9D3004]) HSP 1 Score: 87.4261 bits (215), Expect = 1.249e-14 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0 Query: 280 GGSSCTDSPL---TASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPT--PSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSV 376 GG + T SP TASPT APT PT+ PTA+PT +P+ASP++V PT +PT PT+ PT P+ +PT +PT SPT+ PTA+PT+ P ASPT PT SPT+V Sbjct: 990 GGQTPTASPTAVPTASPTVAPTASPTAVPTASPTVAPTASPTAV-PTASPTAVPTAS-PTVAPTASPTVAPTESPTAVPTASPTVVPMASPTVAPTESPTAV 1089 HSP 2 Score: 83.1889 bits (204), Expect = 3.535e-13 Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0 Query: 290 TASPTRAPTGQPTSTPTATPTFSPSASPSSV---GPTVTPTPAPTSLLPTPSP------NPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPT 374 TASPT APT PT PT +PT P+ASP+ V PTV PT +PT++ PT SP +PTA PT SPT+ PTA+PT+ P ASPT TP PSP+ Sbjct: 1043 TASPTVAPTASPTVAPTESPTAVPTASPTVVPMASPTVAPTESPTAV-PTASPTAVPMASPTAVPTASPTAVPTASPTVVPMASPTLTPNPSPS 1135 HSP 3 Score: 82.4185 bits (202), Expect = 5.604e-13 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0 Query: 290 TASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTS---LLPTPSP------NPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSV 376 TASPT PT PT+ PTA+PT +P+ASP+ V PT +PT PT+ ++P SP +PTA PT SPT+ P A+PT PTASPT PT SPT V Sbjct: 1027 TASPTAVPTASPTAVPTASPTVAPTASPT-VAPTESPTAVPTASPTVVPMASPTVAPTESPTAVPTASPTAVPMASPTAVPTASPTAVPTASPTVV 1121 HSP 4 Score: 68.9366 bits (167), Expect = 1.094e-8 Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 290 TASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTS-----------LLPTPSPN--PTASPTLSPTSSPTAAPTLTP----TASPTTTPTPSPTS 375 TASPT APT PT+ PTA+PT P ASP+ V PT +PT PT+ +PT SP PTASPT+ P +SPT P +P TA+P TP+ SPT+ Sbjct: 1051 TASPTVAPTESPTAVPTASPTVVPMASPT-VAPTESPTAVPTASPTAVPMASPTAVPTASPTAVPTASPTVVPMASPTLTPNPSPSQDSTATPMVTPSSSPTA 1152 HSP 5 Score: 68.5514 bits (166), Expect = 1.292e-8 Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 0 Query: 291 ASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSP----TAAPTLTPTASPTTTP 369 ASPT APT PT+ PTA+PT P ASP++V PT +PT PT+ +P+ P ASPTL+P SP TA P +TP++SPT TP Sbjct: 1076 ASPTVAPTESPTAVPTASPTAVPMASPTAV-PTASPTAVPTA---SPTVVPMASPTLTPNPSPSQDSTATPMVTPSSSPTATP 1154
BLAST of EWM23750.1 vs. NCBI_GenBank
Match: gi|585107419|gb|EWM25605.1| (hypothetical protein Naga_100543g1 [Nannochloropsis gaditana]) HSP 1 Score: 78.5666 bits (192), Expect = 6.313e-12 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 0 Query: 290 TASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTS 375 TA+PT +PT PT+ PTA+PT SP+A+P+ + PT +PT APT+ +P+P+PTA+PTLSPT+SPT APT +PT SPT PT SPT+ Sbjct: 373 TAAPTLSPTASPTAVPTASPTPSPTAAPT-LSPTASPTTAPTA---SPTPSPTAAPTLSPTASPTTAPTASPTPSPTAAPTLSPTA 454 HSP 2 Score: 78.1814 bits (191), Expect = 9.580e-12 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0 Query: 292 SPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTS---LLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPT 374 +PT PT PT +PTA PT SP+ASP++V PT +PTP+PT+ L PT S PT +PT SPT SPTAAPTL+PTASPTT PT SPT Sbjct: 359 APTDNPTASPTLSPTAAPTLSPTASPTAV-PTASPTPSPTAAPTLSPTAS--PTTAPTASPTPSPTAAPTLSPTASPTTAPTASPT 441 HSP 3 Score: 73.9442 bits (180), Expect = 1.910e-10 Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 0 Query: 288 PLTASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSP--NPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSV 376 P TA+PT AP+ P PT++PT +PS PS +GPT P+ PT +LPT SP NPTA+P+ +PT +PTA+PTL+PTA+PT +PT SPT+V Sbjct: 299 PATAAPTVAPSLGPAPVPTSSPTATPSQGPS-IGPTTLPSALPT-VLPTISPTFNPTAAPSEAPTDNPTASPTLSPTAAPTLSPTASPTAV 387 HSP 4 Score: 73.9442 bits (180), Expect = 2.200e-10 Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 0 Query: 290 TASPTRAPTGQPTSTPTATPTFSPSASPSSVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPTSV 376 TA+PT +PT PT+ PTA+PT SP+A+P+ + PT +PT APT+ PTPS PTA+PTLSPT+SPTAAP+ +PT SPT P+ +PT + Sbjct: 397 TAAPTLSPTASPTTAPTASPTPSPTAAPT-LSPTASPTTAPTAS-PTPS--PTAAPTLSPTASPTAAPSASPTPSPTAAPSMAPTII 479 HSP 5 Score: 71.633 bits (174), Expect = 1.208e-9 Identity = 50/89 (56.18%), Postives = 62/89 (69.66%), Query Frame = 0 Query: 293 PTRAPTGQPTSTPTATPTFSPSASPS-------SVGPTVTPTPAPTSLLPTPSPNPTASPTLSPTSSPTAAPTLTPTASPTTTPTPSPT 374 PT P+ PT PT +PTF+P+A+PS + PT++PT APT +P+ +PTA PT SPT SPTAAPTL+PTASPTT PT SPT Sbjct: 332 PTTLPSALPTVLPTISPTFNPTAAPSEAPTDNPTASPTLSPTAAPTL---SPTASPTAVPTASPTPSPTAAPTLSPTASPTTAPTASPT 417 The following BLAST results are available for this feature:
BLAST of EWM23750.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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