EWM23778.1, cds6892 (CDS) Nannochloropsis gaditana

Overview
NameEWM23778.1
Unique Namecds6892
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:774396..775190 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23778.1
Product3mercaptopyruvate sulfurtransferase
Orig transcript idgnl|cribi|Naga_100330g5.4043.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:774396..775190 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
Homology
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|585105000|gb|EWM23777.1| (3mercaptopyruvate sulfurtransferase [Nannochloropsis gaditana])

HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLRGRGSEGGKEHTRVGQSSMRKAVKR 264
            MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLRGRGSEGGKEHTRVGQSSMRKAVKR
Sbjct:  158 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLRGRGSEGGKEHTRVGQSSMRKAVKR 421          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|585105001|gb|EWM23778.1| (3mercaptopyruvate sulfurtransferase [Nannochloropsis gaditana])

HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLRGRGSEGGKEHTRVGQSSMRKAVKR 264
            MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLRGRGSEGGKEHTRVGQSSMRKAVKR
Sbjct:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLRGRGSEGGKEHTRVGQSSMRKAVKR 264          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|298715071|emb|CBJ27778.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 231.876 bits (590), Expect = 8.114e-72
Identity = 118/236 (50.00%), Postives = 151/236 (63.98%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVE-GEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWA 235
            M+PS   FS   S LGL + D IVVY  +  FSA RCWWTFRAFGHE+V++L GG PAW++AGG  E G  +   +RP  GLV+  GNAW+L+ +GFQ +L A ++ +W+QVL   E G+EA GQ    + DAR   RF A+  EPR G+A GH+PGS  VPF +V  +GD   FR P E+ + F   GVDV S      + TTCGSGVTAA L+ A+ LAG      PV+D SW+
Sbjct:   68 MIPSEDVFSAKASELGLSSNDTIVVYAKKGSFSAPRCWWTFRAFGHERVHVLNGGFPAWESAGGSVERGEVKPVSTRPSSGLVQTSGNAWMLRSKGFQGRLNAPMLRTWRQVLSQSEKGKEAAGQ----VVDARSLARFKAEAPEPRAGVAGGHVPGSACVPFAKVLVDGDVNSFRSPKEIRKAFEDAGVDVDS---PLPITTTCGSGVTAAVLTLALELAGRKAELSPVYDGSWS 296          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|953491971|emb|CEG45548.1| (3-mercaptopyruvate sulfurtransferase [Plasmopara halstedii])

HSP 1 Score: 181.03 bits (458), Expect = 2.721e-52
Identity = 95/235 (40.43%), Postives = 128/235 (54.47%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWA 235
            MLP    F +A+  LG+EN D ++VY  + CFS ARCWWTF+ FGH  V+IL GG+  W+    K ET   Q                  +L    ++A+L  DLV +W++VLK ++ +         I DARG  RF A   EPRPG+  GHIPGSVNVPF  +    D++ FR   ++   FA   V     S    +IT+CGSGVTA+ LSF + L G  +   PV+D SW+
Sbjct:   77 MLPDPETFEDAMMDLGVENDDTVIVYGGKHCFSPARCWWTFKFFGHSSVHILNGGITKWKCEKRKIETDEPQT-----------------VLAGSRYKAQLDKDLVVTWEEVLKKIDTDTQ-------IVDARGAARFYAKEPEPRPGMRGGHIPGSVNVPFSTLLNPTDFSLFRDLDDIKRAFAEANVKTDESS---PIITSCGSGVTASVLSFGLHLIGKPLDKAPVYDGSWS 284          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|568010588|gb|ETL84773.1| (hypothetical protein L917_15508 [Phytophthora parasitica])

HSP 1 Score: 180.644 bits (457), Expect = 5.976e-52
Identity = 95/241 (39.42%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETG-PAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLR 240
            MLP    F  A+  LG+EN D ++VY  + CFS ARCWWTF+ FGH+ V+IL GG+  W+    + ETG P Q                  ++    ++A+    L  SW+ VL  ++ +         I DARG PRF A   EPRPG+  GHIPGSVNVPF ++    D++ FR  AE+   FA   V +   S    +ITTCGSGVTA+ L+  + L+G  +   PV+D SW+   +R
Sbjct:   83 MLPKTETFEHAMMYLGVENDDTVIVYGGKHCFSPARCWWTFKYFGHDNVHILNGGITKWKKEKREIETGEPEQ------------------VVAGASYKAQPNEKLAVSWEDVLAKIDTDTQ-------IVDARGAPRFYAKEPEPRPGMRGGHIPGSVNVPFGKIVSPDDYSLFRDLAEIKNAFAEANVKMDETS---PIITTCGSGVTASVLTLGLHLSGKPLEKAPVYDGSWSEWGMR 295          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|568040497|gb|ETM37953.1| (hypothetical protein L914_15648 [Phytophthora parasitica])

HSP 1 Score: 180.644 bits (457), Expect = 7.034e-52
Identity = 95/241 (39.42%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETG-PAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLR 240
            MLP    F  A+  LG+EN D ++VY  + CFS ARCWWTF+ FGH+ V+IL GG+  W+    + ETG P Q                  ++    ++A+    L  SW+ VL  ++ +         I DARG PRF A   EPRPG+  GHIPGSVNVPF ++    D++ FR  AE+   FA   V +   S    +ITTCGSGVTA+ L+  + L+G  +   PV+D SW+   +R
Sbjct:   87 MLPKTETFEHAMMYLGVENDDTVIVYGGKHCFSPARCWWTFKYFGHDNVHILNGGITKWKKEKREIETGEPEQ------------------VVAGASYKAQPNEKLAVSWEDVLANIDTDTQ-------IVDARGAPRFYAKEPEPRPGMRGGHIPGSVNVPFGKIVSPDDYSLFRDLAEIKNAFAEANVKMDETS---PIITTCGSGVTASVLTLGLHLSGKPLEKAPVYDGSWSEWGMR 299          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|675204959|ref|XP_008911364.1| (hypothetical protein PPTG_16291 [Phytophthora parasitica INRA-310] >gi|566014969|gb|ETI37880.1| hypothetical protein F443_16254 [Phytophthora parasitica P1569] >gi|567952387|gb|ETK78064.1| hypothetical protein L915_15806 [Phytophthora parasitica] >gi|567981049|gb|ETL31495.1| hypothetical protein L916_15703 [Phytophthora parasitica] >gi|568088388|gb|ETN03248.1| hypothetical protein PPTG_16291 [Phytophthora parasitica INRA-310] >gi|570318702|gb|ETO66650.1| hypothetical protein F444_16252 [Phytophthora parasitica P1976] >gi|570942487|gb|ETP07744.1| hypothetical protein F441_16081 [Phytophthora parasitica CJ01A1] >gi|570973031|gb|ETP35775.1| hypothetical protein F442_16111 [Phytophthora parasitica P10297])

HSP 1 Score: 180.644 bits (457), Expect = 7.265e-52
Identity = 95/241 (39.42%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETG-PAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLR 240
            MLP    F  A+  LG+EN D ++VY  + CFS ARCWWTF+ FGH+ V+IL GG+  W+    + ETG P Q                  ++    ++A+    L  SW+ VL  ++ +         I DARG PRF A   EPRPG+  GHIPGSVNVPF ++    D++ FR  AE+   FA   V +   S    +ITTCGSGVTA+ L+  + L+G  +   PV+D SW+   +R
Sbjct:   87 MLPKTETFEHAMMYLGVENDDTVIVYGGKHCFSPARCWWTFKYFGHDNVHILNGGITKWKKEKREIETGEPEQ------------------VVAGASYKAQPNEKLAVSWEDVLAKIDTDTQ-------IVDARGAPRFYAKEPEPRPGMRGGHIPGSVNVPFGKIVSPDDYSLFRDLAEIKNAFAEANVKMDETS---PIITTCGSGVTASVLTLGLHLSGKPLEKAPVYDGSWSEWGMR 299          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|301091252|ref|XP_002895815.1| (3-mercaptopyruvate sulfurtransferase, putative [Phytophthora infestans T30-4] >gi|262096592|gb|EEY54644.1| 3-mercaptopyruvate sulfurtransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 175.637 bits (444), Expect = 3.294e-50
Identity = 93/240 (38.75%), Postives = 129/240 (53.75%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLR 240
            MLP    F +A+  LG+EN D ++VY  + CFS ARCWWTF+ FGH+ V+IL GG+  W+    + E G  Q                  ++    ++A+    L  SW+ VL  ++ E         I DARG  RF A   EPRPG+  GHIPGSVNVPF ++    D++ FR   E+   FA   V +   S   ++ITTCGSGVTA+ L+F + L G  +  V V+D SW+   +R
Sbjct:   69 MLPKPETFEDAMMYLGVENDDTVIVYGGKHCFSPARCWWTFKYFGHDNVHILNGGITKWKNEKRELEKGEPQQ-----------------VVAGASYKAEPNEVLAVSWEDVLAKIDTETQ-------IVDARGAARFYAKEPEPRPGMRGGHIPGSVNVPFGKIVSPDDYSLFRDLGEIKSAFAEANVKMDETS---QIITTCGSGVTASVLTFGLHLTGKPLEKVSVYDGSWSEWGMR 281          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|970664615|gb|KUG01490.1| (Zinc-binding alcohol dehydrogenase domain-containing protein 2 [Phytophthora nicotianae])

HSP 1 Score: 180.644 bits (457), Expect = 5.111e-49
Identity = 95/241 (39.42%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETG-PAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWAACTLR 240
            MLP    F  A+  LG+EN D ++VY  + CFS ARCWWTF+ FGH+ V+IL GG+  W+    + ETG P Q                  ++    ++A+    L  SW+ VL  ++ +         I DARG PRF A   EPRPG+  GHIPGSVNVPF ++    D++ FR  AE+   FA   V +   S    +ITTCGSGVTA+ L+  + L+G  +   PV+D SW+   +R
Sbjct:   87 MLPKTETFEHAMMYLGVENDDTVIVYGGKHCFSPARCWWTFKYFGHDNVHILNGGITKWKKEKREIETGEPEQ------------------VVAGASYKAQPNEKLAVSWEDVLAKIDTDTQ-------IVDARGAPRFYAKEPEPRPGMRGGHIPGSVNVPFGKIVSPDDYSLFRDLAEIKNAFAEANVKMDETS---PIITTCGSGVTASVLTLGLHLSGKPLEKAPVYDGSWSEWGMR 299          
BLAST of EWM23778.1 vs. NCBI_GenBank
Match: gi|1173949588|gb|OQR97607.1| (3-mercaptopyruvate sulfurtransferase [Achlya hypogyna])

HSP 1 Score: 171.014 bits (432), Expect = 2.226e-48
Identity = 92/235 (39.15%), Postives = 123/235 (52.34%), Query Frame = 0
Query:    1 MLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWA 235
            MLP+ + FS A+  LG+ N   I+VY    CFS ARCWWTF+ FGH  V++L GG+  W+  G   E GP    P+ P                 G+ A   + LV + +QVL ++  E         I DARGP RF     EPRPG+  GH+PG++N PF  V    D++ FR P E+ + F A GV    L     + TTCGSGVTAA L+  + L    +   PV+D SW+
Sbjct:   69 MLPTESVFSSAMKNLGITNDTSIIVYGGPNCFSPARCWWTFKYFGHRDVHVLNGGMTQWKKEGRPLEQGP----PAAP-------------TPSSGYVATADSRLVLNAEQVLALLSTENQ-------IIDARGPGRFLGKEAEPRPGVRSGHMPGALNTPFSHVLRSDDYSAFREPLEIQKNFEASGV---RLGDTTLIATTCGSGVTAAVLTLGLHLLDVPLHRAPVYDGSWS 276          
The following BLAST results are available for this feature:
BLAST of EWM23778.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105000|gb|EWM23777.1|0.000e+0100.003mercaptopyruvate sulfurtransferase [Nannochlorops... [more]
gi|585105001|gb|EWM23778.1|0.000e+0100.003mercaptopyruvate sulfurtransferase [Nannochlorops... [more]
gi|298715071|emb|CBJ27778.1|8.114e-7250.00conserved unknown protein [Ectocarpus siliculosus][more]
gi|953491971|emb|CEG45548.1|2.721e-5240.433-mercaptopyruvate sulfurtransferase [Plasmopara h... [more]
gi|568010588|gb|ETL84773.1|5.976e-5239.42hypothetical protein L917_15508 [Phytophthora para... [more]
gi|568040497|gb|ETM37953.1|7.034e-5239.42hypothetical protein L914_15648 [Phytophthora para... [more]
gi|675204959|ref|XP_008911364.1|7.265e-5239.42hypothetical protein PPTG_16291 [Phytophthora para... [more]
gi|301091252|ref|XP_002895815.1|3.294e-5038.753-mercaptopyruvate sulfurtransferase, putative [Ph... [more]
gi|970664615|gb|KUG01490.1|5.111e-4939.42Zinc-binding alcohol dehydrogenase domain-containi... [more]
gi|1173949588|gb|OQR97607.1|2.226e-4839.153-mercaptopyruvate sulfurtransferase [Achlya hypog... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6908rna6908Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications