EWM23787.1, cds6887 (CDS) Nannochloropsis gaditana

Overview
NameEWM23787.1
Unique Namecds6887
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:760396..760490 +
Alignment locationCM002469.1:760755..760830 +
Alignment locationCM002469.1:761036..761102 +
Alignment locationCM002469.1:761253..761687 +

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Properties
Property NameValue
End range.
End range761687
Protein idEWM23787.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101057g2.3272.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:760396..760490 +
CM002469.1supercontigCM002469.1:760755..760830 +
CM002469.1supercontigCM002469.1:761036..761102 +
CM002469.1supercontigCM002469.1:761253..761687 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23787.1 vs. NCBI_GenBank
Match: gi|585105012|gb|EWM23787.1| (hypothetical protein Naga_101057g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 432.18 bits (1110), Expect = 7.537e-153
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 
Query:    1 MAPSIPMVVAATLLVSGASAFLAPVSTPSSSRLYASDGMALTTETRRPSSLDLSQMTVHAGRDALLQFQDKRKTKGEAFDAVHEPVESTMKRFNNLYGRPVIPFYRTTLYELVQVSLSSFPALSLSLSLSLSLSLFLSPSLSLVSLPPRLLTPRLDSTSASRSYLPPPFHPSFPPSTLFFRMPCNLPYRPRLFLYFDLRELHDERSTRHSPLITSHRLPSSLPP 224
            MAPSIPMVVAATLLVSGASAFLAPVSTPSSSRLYASDGMALTTETRRPSSLDLSQMTVHAGRDALLQFQDKRKTKGEAFDAVHEPVESTMKRFNNLYGRPVIPFYRTTLYELVQVSLSSFPALSLSLSLSLSLSLFLSPSLSLVSLPPRLLTPRLDSTSASRSYLPPPFHPSFPPSTLFFRMPCNLPYRPRLFLYFDLRELHDERSTRHSPLITSHRLPSSLPP
Sbjct:    1 MAPSIPMVVAATLLVSGASAFLAPVSTPSSSRLYASDGMALTTETRRPSSLDLSQMTVHAGRDALLQFQDKRKTKGEAFDAVHEPVESTMKRFNNLYGRPVIPFYRTTLYELVQVSLSSFPALSLSLSLSLSLSLFLSPSLSLVSLPPRLLTPRLDSTSASRSYLPPPFHPSFPPSTLFFRMPCNLPYRPRLFLYFDLRELHDERSTRHSPLITSHRLPSSLPP 224
The following BLAST results are available for this feature:
BLAST of EWM23787.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105012|gb|EWM23787.1|7.537e-153100.00hypothetical protein Naga_101057g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6903rna6903Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications