EWM23793.1, cds6880 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23793.1 vs. NCBI_GenBank
Match: gi|585105025|gb|EWM23793.1| (hypothetical protein Naga_100537g1 [Nannochloropsis gaditana]) HSP 1 Score: 435.647 bits (1119), Expect = 9.341e-155 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
Query: 1 MYMILKPLIALVAWTAFSVVAAEQCATPPKLRRVQVNTEVKHIDLGVSGGSGPSIAANGTDFFLMQFAIDLPEPVYDGWNITLRFDKTIFMIQNLEADLIEHNADNTTLIFGPKEWNQDLKPGFQWQAWQGSCAGSPLHVLESYLSYDPTALPPSRPPPRPLHMEPPGVTVHLPVEGEKFNLAKSLQFSMLFYEAQRSGRMPSNKRVSR 209
MYMILKPLIALVAWTAFSVVAAEQCATPPKLRRVQVNTEVKHIDLGVSGGSGPSIAANGTDFFLMQFAIDLPEPVYDGWNITLRFDKTIFMIQNLEADLIEHNADNTTLIFGPKEWNQDLKPGFQWQAWQGSCAGSPLHVLESYLSYDPTALPPSRPPPRPLHMEPPGVTVHLPVEGEKFNLAKSLQFSMLFYEAQRSGRMPSNKRVSR
Sbjct: 1 MYMILKPLIALVAWTAFSVVAAEQCATPPKLRRVQVNTEVKHIDLGVSGGSGPSIAANGTDFFLMQFAIDLPEPVYDGWNITLRFDKTIFMIQNLEADLIEHNADNTTLIFGPKEWNQDLKPGFQWQAWQGSCAGSPLHVLESYLSYDPTALPPSRPPPRPLHMEPPGVTVHLPVEGEKFNLAKSLQFSMLFYEAQRSGRMPSNKRVSR 209
BLAST of EWM23793.1 vs. NCBI_GenBank
Match: gi|1207947248|ref|XP_021363498.1| (uncharacterized protein LOC110456830 isoform X2 [Mizuhopecten yessoensis] >gi|1205895750|gb|OWF45591.1| Endoglucanase E-4 [Mizuhopecten yessoensis]) HSP 1 Score: 59.6918 bits (143), Expect = 5.071e-7 Identity = 45/152 (29.61%), Postives = 71/152 (46.71%), Query Frame = 0
Query: 63 FLMQFAIDLPEPVYDGWNITLRFDKTIFMIQNLEADLIEHNADNTTLIF------GPKEWNQDLKPGFQWQAWQGSCAGSPLHVLESYLSYDPTALPPSRPPPRPLHMEPPGVTVHLPVEGEKFNLAKSLQFSMLFYEAQRSGRMPSNKRVS 208
F +F ++PE V GW + L FD+ + + D+I+ DNT + G + Q L Q A+ GS + L + +++D +PP+ P G K+N + L+ S+LFYEAQRSG++P N R+S
Sbjct: 34 FEGKFVFNIPEEV-AGWEVILHFDEPVTGLTEWMGDIIKTANDNTEYVLVSKPHTGIQHVGQTLSITVQ-AAYSGSAPPTAKGTLVN-MAHDGQTVPPAPTVP-----------------GAKYNYDEVLEKSILFYEAQRSGKLPPNNRIS 165
BLAST of EWM23793.1 vs. NCBI_GenBank
Match: gi|1207947246|ref|XP_021363497.1| (uncharacterized protein LOC110456830 isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 59.6918 bits (143), Expect = 5.337e-7 Identity = 45/152 (29.61%), Postives = 71/152 (46.71%), Query Frame = 0
Query: 63 FLMQFAIDLPEPVYDGWNITLRFDKTIFMIQNLEADLIEHNADNTTLIF------GPKEWNQDLKPGFQWQAWQGSCAGSPLHVLESYLSYDPTALPPSRPPPRPLHMEPPGVTVHLPVEGEKFNLAKSLQFSMLFYEAQRSGRMPSNKRVS 208
F +F ++PE V GW + L FD+ + + D+I+ DNT + G + Q L Q A+ GS + L + +++D +PP+ P G K+N + L+ S+LFYEAQRSG++P N R+S
Sbjct: 42 FEGKFVFNIPEEV-AGWEVILHFDEPVTGLTEWMGDIIKTANDNTEYVLVSKPHTGIQHVGQTLSITVQ-AAYSGSAPPTAKGTLVN-MAHDGQTVPPAPTVP-----------------GAKYNYDEVLEKSILFYEAQRSGKLPPNNRIS 173 The following BLAST results are available for this feature:
BLAST of EWM23793.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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