EWM23833.1, cds6838 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23833.1 vs. NCBI_GenBank
Match: gi|585105098|gb|EWM23833.1| (protein required for ethanol metabolism [Nannochloropsis gaditana]) HSP 1 Score: 857.44 bits (2214), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query: 1 MASSIVRRKAGPRIKDGLLSCPLFLRTALLLGALLGLFPVNAAKNLTTDATPLSDDGCHFNYRLRRCEPVAHCHYKYRFLDATFSESCRLKVQRPHTTPLYRSKINGNPALIAAGATALFGVDIAAIIFTPLLQNFPITFNVVQGFILCLAGDTYFQIVEQGGLRGVKRVGVKAWRAVRSGLIGALNNGLVHYSYYKYIDRRFPYHLFTEERFGKPEGTYYKLCVAWAKYWIEWPTIGVYKIASMMVLTAALDGRNGWRKRFAKIPEKFRKRFRLTWLRSLQVWPIYDTILYAYVPASHRPLFNTFMSIAWGGYLSHISQVEGEDGGEGGAVGVGGGEEEEEEEQTREEEEEEDFEEEEDEEEEEEEEEEDEEEEEEEEEEDEAWAYDDLVEEVWHDAEEAERRKMVMEGGDEEGREEL 419
MASSIVRRKAGPRIKDGLLSCPLFLRTALLLGALLGLFPVNAAKNLTTDATPLSDDGCHFNYRLRRCEPVAHCHYKYRFLDATFSESCRLKVQRPHTTPLYRSKINGNPALIAAGATALFGVDIAAIIFTPLLQNFPITFNVVQGFILCLAGDTYFQIVEQGGLRGVKRVGVKAWRAVRSGLIGALNNGLVHYSYYKYIDRRFPYHLFTEERFGKPEGTYYKLCVAWAKYWIEWPTIGVYKIASMMVLTAALDGRNGWRKRFAKIPEKFRKRFRLTWLRSLQVWPIYDTILYAYVPASHRPLFNTFMSIAWGGYLSHISQVEGEDGGEGGAVGVGGGEEEEEEEQTREEEEEEDFEEEEDEEEEEEEEEEDEEEEEEEEEEDEAWAYDDLVEEVWHDAEEAERRKMVMEGGDEEGREEL
Sbjct: 1 MASSIVRRKAGPRIKDGLLSCPLFLRTALLLGALLGLFPVNAAKNLTTDATPLSDDGCHFNYRLRRCEPVAHCHYKYRFLDATFSESCRLKVQRPHTTPLYRSKINGNPALIAAGATALFGVDIAAIIFTPLLQNFPITFNVVQGFILCLAGDTYFQIVEQGGLRGVKRVGVKAWRAVRSGLIGALNNGLVHYSYYKYIDRRFPYHLFTEERFGKPEGTYYKLCVAWAKYWIEWPTIGVYKIASMMVLTAALDGRNGWRKRFAKIPEKFRKRFRLTWLRSLQVWPIYDTILYAYVPASHRPLFNTFMSIAWGGYLSHISQVEGEDGGEGGAVGVGGGEEEEEEEQTREEEEEEDFEEEEDEEEEEEEEEEDEEEEEEEEEEDEAWAYDDLVEEVWHDAEEAERRKMVMEGGDEEGREEL 419
BLAST of EWM23833.1 vs. NCBI_GenBank
Match: gi|298710326|emb|CBJ31946.1| (Protein required for ethanol metabolism [Ectocarpus siliculosus]) HSP 1 Score: 309.686 bits (792), Expect = 6.684e-99 Identity = 149/271 (54.98%), Postives = 188/271 (69.37%), Query Frame = 0
Query: 58 CHFNYRLRRCEPVAHCHYKYRFLDATFSESCRLKVQRPHTTPLYRSKINGNPALIAAGATALFGVDIAAIIFTPLLQNFPITFNVVQGFILCLAGDTYFQIVEQGGLRGVKRVGVKAWRAVRSGLIGALNNGLVHYSYYKYIDRRFPYHLFTEERFGKPEGTYYKLCVAWAKYWIEWPTIGVYKIASMMVLTAALDGRNGWRKRFAKIPEKFRKRFRLTWLRSLQVWPIYDTILYAYVPASHRPLFNTFMSIAWGGYLSHISQVEGEDGGE 328
C ++++ +RCEP + C YKY+FLDAT SESCR + ++ + PA+ GA LF D+AAI +T L+ +P+ FNVVQGF+L +GDT FQ++EQG K +G+K WR RSG+IGALNNGLVHYSYYK+ID RFPY FTE+R+G +G KL V + K+ +EWPTIG+YKIASM VLTA L G + E+ + LTW+RSLQVWPIYD ILYAYVP +HRPLFN+FMSIAWGGYLSH+SQ DG E
Sbjct: 127 CSWSWKEKRCEPASLCQYKYQFLDATVSESCRQADFKVTKAAFEQADVQVKPAVALVGAAGLFAADLAAIRYTDWLKRYPLLFNVVQGFVLLASGDTLFQVLEQGWQ---KVIGLKFWRMARSGIIGALNNGLVHYSYYKWIDGRFPYDKFTEKRWGPKDGAKSKLAVGFTKWALEWPTIGLYKIASMYVLTAVLSGST------KGLWERLQDSLFLTWIRSLQVWPIYDMILYAYVPTAHRPLFNSFMSIAWGGYLSHVSQPHKGDGEE 388 The following BLAST results are available for this feature:
BLAST of EWM23833.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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