EWM23846.1, cds6827 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|585105115|gb|EWM23846.1| (serine threonine-protein phosphatase 2a 65 kda regulatory subunit a alpha isoform-like protein [Nannochloropsis gaditana]) HSP 1 Score: 366.311 bits (939), Expect = 3.628e-128 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 Query: 1 MDQVMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSLLHWSWRRRGTRSQMCGLLRLR 184 MDQVMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSLLHWSWRRRGTRSQMCGLLRLR Sbjct: 1 MDQVMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSLLHWSWRRRGTRSQMCGLLRLR 184
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|298710230|emb|CBJ26305.1| (protein phosphatase 2A regulatory subunit [Ectocarpus siliculosus]) HSP 1 Score: 86.6557 bits (213), Expect = 1.516e-16 Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = 0 Query: 1 MDQVMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 M ++P+L FL D + RLHIL +L + W+P + + LP ++L L +D WR+R+ + + P+L M + FE LL L A+ D V +VR A+ L R+ + G +++ K+ PR+ Y +S FYL+R+A+L+AL+ L Sbjct: 359 MTHILPMLLAFLRDESA---EVRLHILLQLDGLAEWMP---------AMAEQVLP-LVLELGQDIIWRVRRAVMVSVPLLTERMGVNY----FEENLLELYLQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKVLPRIHGFYDESTFYLIRIAILNALKKL 504
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|669172407|ref|XP_008621552.1| (hypothetical protein SDRG_17095 [Saprolegnia diclina VS20] >gi|530726776|gb|EQC25018.1| hypothetical protein SDRG_17095 [Saprolegnia diclina VS20]) HSP 1 Score: 78.1814 bits (191), Expect = 1.374e-13 Identity = 49/160 (30.63%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 4 VMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 ++P++ +FL D V+ RL++L R++A+ PW+ S + LP I L +D WR+R+ I A P L + + + +F+ LL L+AF D V++VR + T L + H+ G ++ I P++ Y S Y R+ + HAL L Sbjct: 354 LVPIMLQFLRDDV---VDVRLNVLKRMSAVSPWMH---------SFEGTLLPAIT-DLSKDLQWRVREAVILALPSLVSSLGA----TYFQEHLLEMFLNAFQDMVSEVRLSTTKILQEILHVVGSDYILESILPKLAQIYDSSIIYQERVNVFHALTQL 496
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|813143206|ref|XP_012199548.1| (hypothetical protein SPRG_19729 [Saprolegnia parasitica CBS 223.65] >gi|641535947|gb|KDO29847.1| hypothetical protein SPRG_19729 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-13 Identity = 49/160 (30.63%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 4 VMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 ++P++ +FL D V+ RL++L R++A+ PW+ S + LP I L +D WR+R+ I A P L + + + +F+ LL L+AF D V++VR + T L + H+ G ++ I P++ Y S Y R+ + HAL L Sbjct: 355 LVPIMLQFLRDDV---VDVRLNVLKRMSAVSPWMH---------SFEGTLLPAIT-DLSKDLQWRVREAVILALPSLVSSLGA----TYFQEHLLEMFLNAFQDMVSEVRLSTTKILQEILHVVGSEYILESILPKLAQIYDSSIIYQERVNVFHALTQL 497
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|673018786|ref|XP_008863354.1| (hypothetical protein H310_01825 [Aphanomyces invadans] >gi|574480268|gb|ETW07261.1| hypothetical protein H310_01825 [Aphanomyces invadans]) HSP 1 Score: 77.411 bits (189), Expect = 2.590e-13 Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = 0 Query: 2 DQVMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 + ++P+L +FL D V+ARL++L R+ I PW+ S ++ LP I L +D WR+R+ I A P L + S +F+ LL L+AF D V++VR + T L + + G ++ + P++ Y S Y R+ + HAL L Sbjct: 352 NSLIPILLQFLRDDV---VDARLNVLKRMDNISPWMS---------SYESTLLPAIT-DLSKDLQWRVREAVILALPSLVTTLGS----AYFQQHLLDMFLNAFQDMVSEVRLSTTKILRNILDVVGSEYILESVLPKLTKIYESSVTYQERVNVFHALGQL 496
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|1173942961|gb|OQR91884.1| (serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A [Achlya hypogyna]) HSP 1 Score: 76.6406 bits (187), Expect = 5.019e-13 Identity = 49/160 (30.63%), Postives = 81/160 (50.62%), Query Frame = 0 Query: 4 VMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 ++P++ +FL D V+ RL++L R++A+ PW+ S + LP I L +D WR+R+ I A P L + + + +F+ LL L+AF D V++VR + T L + + G +V I P++ Y S Y R+ + HAL L Sbjct: 354 LVPIMLQFLRDDV---VDVRLNVLKRMSAVSPWMHAFES---------TLLPAIT-DLSKDLQWRVREAVILALPSLVSSLGA----TYFQEHLLEMFLNAFQDMVSEVRLSTTKILKEILQVVGSEYVLESILPKLAQIYDSSIIYQERVNVFHALTQL 496
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|698817672|ref|XP_009841865.1| (hypothetical protein H257_15444 [Aphanomyces astaci] >gi|574103096|gb|ETV68640.1| hypothetical protein H257_15444 [Aphanomyces astaci]) HSP 1 Score: 75.485 bits (184), Expect = 1.249e-12 Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 0 Query: 4 VMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 ++P+L +FL D V+ARL++L R+ I PW+ S ++ LP I L +D WR+R+ I A P L + + +F+ LL L+AF D V++VR + T L + + G +V + P++ Y S Y R+ + HAL L Sbjct: 354 LIPILLQFLRDDV---VDARLNVLKRMDNISPWMS---------SYESTLLPAIT-DLSKDLQWRVREAVILALPSLVTTLGA----AYFQQHLLDMFLNAFQDMVSEVRLSTTKILRDILDVVGSDYVLESVLPKLSKIYENSVTYQERVNVFHALGQL 496
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|1173957549|gb|OQS04051.1| (serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A [Thraustotheca clavata]) HSP 1 Score: 71.2478 bits (173), Expect = 3.749e-11 Identity = 46/160 (28.75%), Postives = 80/160 (50.00%), Query Frame = 0 Query: 4 VMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 ++P++ +FL D V+ RL++L R++++ W+ S + LP I L +D WR+R+ I A P L + + + +F+ LL L+AF D V++VR + T L + + G ++ I P++ Y S Y R+ + HAL L Sbjct: 358 LVPIMLQFLRDDV---VDVRLNVLKRMSSVSVWMH---------SFEGTLLPAIT-DLSKDLQWRVREAVILALPSLVSSLGA----AYFQEHLLEMFLNAFQDMVSEVRLSTTKILKDILQVVGSDYILESILPKLAQIYDSSIIYQERVNVFHALSQL 500
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|952521293|gb|KRT81468.1| (HEAT domain-containing protein [Oryctes borbonicus]) HSP 1 Score: 68.1662 bits (165), Expect = 2.480e-10 Identity = 56/174 (32.18%), Postives = 77/174 (44.25%), Query Frame = 0 Query: 1 MDQVMPLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSLLHWSWRRRGTR 174 ++ ++PL L D CPEV RL+I+S L + + S S LP I+ L ED WR+R IE P+LA + E F+ L ++ D V +R AATL L ++ G + E I P+VLA R YL RM L + L TR Sbjct: 101 IEHLLPLFLAQLKD-ECPEV--RLNIISNLDCVNEVI-------GIQQLSQSLLPAIV-ELAEDSKWRVRSAIIEYMPLLAGQLGQE----FFDEKLNALCMTWLMDHVFAIREAATLNLRKLVDQFGAEWAENTIIPKVLAMSRDQN-YLYRMTCLFCINVLAEACGSDISTR 258
BLAST of EWM23846.1 vs. NCBI_GenBank
Match: gi|635369993|emb|CCI41814.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 67.781 bits (164), Expect = 5.657e-10 Identity = 49/158 (31.01%), Postives = 78/158 (49.37%), Query Frame = 0 Query: 6 PLLERFLMDATCPEVNARLHILSRLAAIGPWLPPPPSAPSSPSPSTSSLPTILLHLREDENWRLRKGAIEAFPVLAAHMSSEHRLVHFEPTLLPPLLSAFHDRVAQVRAAATLALGRVAHITGPAFVEGKIWPRVLAQYRQSRFYLMRMALLHALQSL 163 P+L FL D V+ RL+IL R+ + PW+ S LP I L D WR+R+ + + P L + +++ F+ LL L+A+ D V +VR +AT L ++ + G F+ + PR+ A +S Y R+ +LHAL+ L Sbjct: 2053 PMLLLFLRDEV---VDVRLNILKRMENLAPWMS---------SFEDVFLPAIA-DLARDLQWRVREAVVLSIPSLVGSLGTQY----FQEHLLDIYLNAYSDMVGEVRLSATKILPQLVNTAGNEFMLQHVLPRLTAILEKSIIYQERVNVLHALEQL 2193 The following BLAST results are available for this feature:
BLAST of EWM23846.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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