EWM29994.1, cds679 (CDS) Nannochloropsis gaditana

Overview
NameEWM29994.1
Unique Namecds679
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:149896..151776 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29994.1
Productexportin 4
Partialtrue
Orig transcript idgnl|cribi|Naga_101604g1.8320.mrna
GbkeyCDS
End range.
End range151776
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:149896..151776 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|585112603|gb|EWM29994.1| (exportin 4, partial [Nannochloropsis gaditana])

HSP 1 Score: 1265.75 bits (3274), Expect = 0.000e+0
Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0
Query:    1 PPSLLPATSLPPSTAAALLVDACTHLQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFSAEQEGKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPPSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            PPSLLPATSLPPSTAAALLVDACTHLQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFSAEQEGKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPPSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR
Sbjct:    1 PPSLLPATSLPPSTAAALLVDACTHLQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFSAEQEGKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPPSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|695395990|ref|XP_009521321.1| (hypothetical protein PHYSODRAFT_486369 [Phytophthora sojae] >gi|348686218|gb|EGZ26033.1| hypothetical protein PHYSODRAFT_486369 [Phytophthora sojae])

HSP 1 Score: 226.483 bits (576), Expect = 1.285e-59
Identity = 180/617 (29.17%), Postives = 294/617 (47.65%), Query Frame = 0
Query:   26 LQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFG----GEAGE--GQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQP---PSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            + H+  F   R  + P    +SP+++E +L  + R   TYL PD  L  +G +AP L+Q FG    G AGE    + Q   +   +L  W +Q  V +  I  +  +VL+  + +    + S+ W+ +++                  N   G   + +            R+ ++LRG+L E +    +A  +    +     V+ PVE RL  L + +     K       +  E+ ++  +Y+G+AR+ ++T  A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+ + ++AY  HN+G+       +EE   D+L +L LLSH+ SKDF+DFS     EQE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV+ MV  Y E++  LP  LF  LL S++ G++    ++ R+S +AL  LAS+H +             G   GLEAH   HP +F    R +  + ++E      LDA +  L  LIL ++  +  L   I  EQ    PS ++RL   F +L+S + P              G A  R+ ++ F+ +L AF  +VR F+Q++
Sbjct:  624 MSHVLEFEASRLAQNPTSDCVSPFVSEGLLKTITRLCATYLAPD-VLVDSGEVAPALLQVFGFQNGGRAGELLNFLVQKTTV---YLLHWSTQPVVMENLIEFL--LVLSNTKAIN-PVLSSQMWQSLVQ-----------------ANASAGSFMSAATGGSDALHTAVARIPANLRGQLTEALCRAGMASSDQNMRAAHFQAVSHPVEQRLQQL-IAMPNFEAKQTANDVRVQEELTLLVEMYSGIARSAESTSHAPITTFCLPALPVIVKIFQIFQGDSQMVNLILNFFCLMVEAQLCYLSPRDALLVYTASDELIRAYCRHNLGKKSMLGGVEEENYADLLALLTLLSHLVSKDFIDFSEDATTEQEQAEATRASSVVADVVFSGLRQVIPLMTEQLLAYPSLSKQYFTLVSYMVEVYAEKLVTLPSELFQMLLHSLLVGMRHVSVDVVRNSFQALGELASYHWKA----------QQGQKPGLEAHRQQHPDMFMAFLRVIFRMALFEDFNPVILDACAGTLYPLILIEQARYSALAEEISHEQASLDPSAQQRLSAAFTELISFLTP---------ADIATGTATTRKMRMQFKTNLYAFVAEVRGFLQVK 1196          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|675174911|ref|XP_008896340.1| (hypothetical protein PPTG_04224 [Phytophthora parasitica INRA-310] >gi|566013020|gb|ETI35931.1| hypothetical protein F443_17827 [Phytophthora parasitica P1569] >gi|568104049|gb|ETN18706.1| hypothetical protein PPTG_04224 [Phytophthora parasitica INRA-310] >gi|570316706|gb|ETO64654.1| hypothetical protein F444_17864 [Phytophthora parasitica P1976] >gi|570940497|gb|ETP05754.1| hypothetical protein F441_17701 [Phytophthora parasitica CJ01A1] >gi|570970747|gb|ETP33866.1| hypothetical protein F442_17682 [Phytophthora parasitica P10297])

HSP 1 Score: 226.098 bits (575), Expect = 1.803e-59
Identity = 177/615 (28.78%), Postives = 293/615 (47.64%), Query Frame = 0
Query:   26 LQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFG----GEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPP---SVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            + H+  F   R  + P    +SP+++E ++    R   TYL PD  L   G +AP L+Q FG    G AGE  +   ++ A  +L  WP+Q  V +  I  +  +VL+    +  + + SE W+ +++                  N   G    P+     P      R+ ++LRG+L E V    +A  +    +     V+ P+  RL  L +       K       +  E+ ++  +Y+G+AR+ ++T  A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+   + AY  HN+G+     +++EE   D+L +L LLSH+ +KDF+DFS     +QE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV+ MV  Y E++  LP  LF  LL S++ G+++   ++ R+S +AL  LAS+H + + S+            GLEAH   HP +F    R +  + ++E      LD  +  L  LIL ++  +  L   I  EQ       ++RL   F +L+S + P         G    G A  R+ ++ F+ +L AF  + R F+Q++
Sbjct:  623 MSHILEFETTRLAQNPSSDCVSPFVSEGLIKMTTRLCATYLSPD-VLVDAGEVAPALLQVFGFQNGGRAGE-LLNFLVQKATVYLLHWPTQPVVMENLIEFL--LVLSNTRAIN-SVLNSEMWQSLVQ-----------------ANASAGSFITPTGGNATPLNTAVARVPANLRGQLTEAVCRAGMASTDQNMRAAHFQAVSQPLAQRLQQL-IATPNFESKQTANDVRVKEELKLLVEMYSGVARSTESTSHAPITTFCLPALPVIVKIFQIFQGDSQIVNLILNFFCVMVEAQLCYLSPRDALQVYTASDDLIHAYCRHNLGKKSMLGDAEEENYTDLLALLTLLSHLVAKDFIDFSEDATTQQEQADATRASSVVADVVFSGLRQVIPLMTEQLLAYPSLSKQYFTLVSYMVEVYAEKLVSLPSELFQMLLHSLLIGMRQVSVDVVRNSFQALGELASYHWKALQSQ----------RPGLEAHRQQHPDMFMAFLRVIFRMALFEDFNPVILDGCAGTLFPLILIEQARYSALAEEISREQASMDAGSQQRLAAAFAELISFLTP---------GDIATGTATTRKMRMQFKTNLYAFVAEARGFLQVK 1195          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|568008615|gb|ETL82832.1| (hypothetical protein L917_17080, partial [Phytophthora parasitica])

HSP 1 Score: 225.713 bits (574), Expect = 2.322e-59
Identity = 177/615 (28.78%), Postives = 293/615 (47.64%), Query Frame = 0
Query:   26 LQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFG----GEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPP---SVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            + H+  F   R  + P    +SP+++E ++    R   TYL PD  L   G +AP L+Q FG    G AGE  +   ++ A  +L  WP+Q  V +  I  +  +VL+    +  + + SE W+ +++                  N   G    P+     P      R+ ++LRG+L E V    +A  +    +     V+ P+  RL  L +       K       +  E+ ++  +Y+G+AR+ ++T  A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+   + AY  HN+G+     +++EE   D+L +L LLSH+ +KDF+DFS     +QE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV+ MV  Y E++  LP  LF  LL S++ G+++   ++ R+S +AL  LAS+H + + S+            GLEAH   HP +F    R +  + ++E      LD  +  L  LIL ++  +  L   I  EQ       ++RL   F +L+S + P         G    G A  R+ ++ F+ +L AF  + R F+Q++
Sbjct:  635 MSHILEFETTRLAQNPSSDCVSPFVSEGLIKMTTRLCATYLSPD-VLVDAGEVAPALLQVFGFQNGGRAGE-LLNFLVQKATVYLLHWPTQPVVMENLIEFL--LVLSNTRAIN-SVLNSEMWQSLVQ-----------------ANASAGSFITPTGGNATPLNTAVARVPANLRGQLTEAVCRAGMASTDQNMRAAHFQAVSQPLAQRLQQL-IATPNFESKQTANDVRVKEELKLLVEMYSGVARSTESTSHAPITTFCLPALPVIVKIFQIFQGDSQIVNLILNFFCVMVEAQLCYLSPRDALQVYTASDDLIHAYCRHNLGKKSMLGDAEEENYTDLLALLTLLSHLVAKDFIDFSEDATTQQEQADATRASSVVADVVFSGLRQVIPLMTEQLLAYPSLSKQYFTLVSYMVEVYAEKLVSLPSELFQMLLHSLLIGMRQVSVDVVRNSFQALGELASYHWKALQSQ----------RPGLEAHRQQHPDMFMAFLRVIFRMALFEDFNPVILDGCAGTLFPLILIEQARYSALAEEISREQASMDAGSQQRLAAAFAELISFLTP---------GDIATGTATTRKMRMQFKTNLYAFVAEARGFLQVK 1207          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|567950460|gb|ETK76171.1| (hypothetical protein L915_17353, partial [Phytophthora parasitica] >gi|567979128|gb|ETL29610.1| hypothetical protein L916_17246, partial [Phytophthora parasitica] >gi|568038541|gb|ETM36068.1| hypothetical protein L914_17151, partial [Phytophthora parasitica])

HSP 1 Score: 225.713 bits (574), Expect = 2.367e-59
Identity = 177/615 (28.78%), Postives = 293/615 (47.64%), Query Frame = 0
Query:   26 LQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFG----GEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPP---SVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            + H+  F   R  + P    +SP+++E ++    R   TYL PD  L   G +AP L+Q FG    G AGE  +   ++ A  +L  WP+Q  V +  I  +  +VL+    +  + + SE W+ +++                  N   G    P+     P      R+ ++LRG+L E V    +A  +    +     V+ P+  RL  L +       K       +  E+ ++  +Y+G+AR+ ++T  A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+   + AY  HN+G+     +++EE   D+L +L LLSH+ +KDF+DFS     +QE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV+ MV  Y E++  LP  LF  LL S++ G+++   ++ R+S +AL  LAS+H + + S+            GLEAH   HP +F    R +  + ++E      LD  +  L  LIL ++  +  L   I  EQ       ++RL   F +L+S + P         G    G A  R+ ++ F+ +L AF  + R F+Q++
Sbjct:  635 MSHILEFETTRLAQNPSSDCVSPFVSEGLIKMTTRLCATYLSPD-VLVDAGEVAPALLQVFGFQNGGRAGE-LLNFLVQKATVYLLHWPTQPVVMENLIEFL--LVLSNTRAIN-SVLNSEMWQSLVQ-----------------ANASAGSFITPTGGNATPLNTAVARVPANLRGQLTEAVCRAGMASTDQNMRAAHFQAVSQPLAQRLQQL-IATPNFESKQTANDVRVKEELKLLVEMYSGVARSTESTSHAPITTFCLPALPVIVKIFQIFQGDSQIVNLILNFFCVMVEAQLCYLSPRDALQVYTASDDLIHAYCRHNLGKKSMLGDAEEENYTDLLALLTLLSHLVAKDFIDFSEDATTQQEQADATRASSVVADVVFSGLRQVIPLMTEQLLAYPSLSKQYFTLVSYMVEVYAEKLVSLPSELFQMLLHSLLIGMRQVSVDVVRNSFQALGELASYHWKALQSQ----------RPGLEAHRQQHPDMFMAFLRVIFRMALFEDFNPVILDGCAGTLFPLILIEQARYSALAEEISREQASMDAGSQQRLAAAFAELISFLTP---------GDIATGTATTRKMRMQFKTNLYAFVAEARGFLQVK 1207          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|298710877|emb|CBJ26386.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 207.608 bits (527), Expect = 9.167e-58
Identity = 121/310 (39.03%), Postives = 190/310 (61.29%), Query Frame = 0
Query:  307 VLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRK-DANSKEEAVGDILCVLELLSHVASKDFVDFSAEQEGKLAADT-VADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPPSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRA 614
            VL +LRD AE  +  + +  +M+L  A G+ALK Y   + G  R+ D  S+E+A  D++CVL+LLS++ +KD VD S E   +   D  V DVVFFGL++++PLM+E LL++P L  QYF+LV  MV T++++++ L   LF Q++ S++FG Q  +S +AR+SL+A++ +A  H   V  +V+       GG GL AH+   P LF    R LL +++++ S+WDRLDA S A+L L++C++E F  L   ++  QP +V+ RL + F KL ++      GG     GRRR P   ++  ++ R  L+ 
Sbjct:   47 VLQYLRDIAEHLLIFMSSSRSMALYEACGKALKIYTDQHAGSVRRVDPTSEEDAYEDVVCVLQLLSNLITKDLVDQSDEPASEKDRDVKVTDVVFFGLKKVMPLMTEGLLQFPELATQYFSLVGFMVQTFSDKLSGLEPELFQQVVSSLVFGSQSTNSPVARNSLQAISVMAGHH---VSEKVK-------GGEGLSAHLAVKPDLFLGILRTLLDMLMFQRSLWDRLDACSLAVLPLLVCEQEGFQRLAEELVASQPETVRPRLVKAFHKLHASHAAC--GGGLDRAGRRRFPEAMKEFTMSCRGFLQT 344          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|1214692330|gb|OWZ06978.1| (LOW QUALITY PROTEIN: Exportin [Phytophthora megakarya])

HSP 1 Score: 217.238 bits (552), Expect = 1.866e-57
Identity = 177/610 (29.02%), Postives = 296/610 (48.52%), Query Frame = 0
Query:   32 FLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRI----AWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVV-GGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPP---SVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            F + R  + P    +SP+++E +L  + R   TYL  D  +   G +AP L+Q FG + G G+  + L         +L  W +Q  V +  I  +  +VL+    +    + S  W+ +++   +   F+       VG        A +            R+ ++LRG+L E +   G+ + E + +A+   A V  PVE RL  L + L     K       +  E+ ++   Y+G+AR+ ++T  A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+   ++AY  HN+G+     +++EE   D+L +L LLSH+ SKDF+DFS     EQE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV  MV  Y E++  LP  LF  LLQS++ G++    ++ R+S +AL+ LAS+H +++ ++            GLEAH   HP +F    R +  + ++E      L   +  L  LIL ++  +  L   I+ EQ     + ++RL   F +L+S + P         G    G A  R+ ++ F+ +L  F  +VR F+Q++
Sbjct:  244 FEVSRLAQNPTSNCVSPFVSEGLLKMITRLCATYLALD-VIANAGEVAPALLQVFGFQNG-GRASELLNFLVEKGTVYLLHWSTQPVVMENLIEFL--LVLSNTRAIN-PVLSSHMWQSLVQANASAGSFMTA-----VGGNDSALNSAVA------------RIPANLRGQLTEALCRAGMASTEQNMQAAHFQA-VTHPVEQRLQQLIL-LPNFESKQTANDVRVQEELKLLIETYSGIARSAESTSHAPITAFCLPALPVIVKIFQIFQGDSQIVNLILNFFCLMVEAQLCYLSPRDALQVYTASDDLIRAYCRHNLGKKSMLGDAEEENYVDLLALLTLLSHLVSKDFIDFSEDATTEQEQADATRASSVVADVVFSGLRQVIPLMTEQLLAYPNLSKQYFTLVTYMVEVYAEKLVSLPTELFQMLLQSLLVGIRHVSVDVVRNSFQALSELASYHWKSLQNQT----------AGLEAHRQQHPDMFMAFLRVIFRMALFEDFNPTILGECAGTLYPLILIEQARYSSLAEEIIREQANLDVATQQRLSAAFTELISFLSP---------GDIATGTANTRKLRVQFKKNLYGFVAEVRGFLQVK 810          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|301112166|ref|XP_002905162.1| (exportin-4, putative [Phytophthora infestans T30-4] >gi|262095492|gb|EEY53544.1| exportin-4, putative [Phytophthora infestans T30-4])

HSP 1 Score: 219.55 bits (558), Expect = 3.078e-57
Identity = 177/615 (28.78%), Postives = 297/615 (48.29%), Query Frame = 0
Query:   26 LQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFG----GEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPP---SVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            + H+  F   R  + P    +SP+++E ++  + R   TYL P+  L   G +AP L+Q FG    G AGE  +   ++ A  +L  WP+Q  V +  I  +  +VL+    +  A + SE W+ +++   +   F+   G    GN               P      R+ ++LRG+L E +    +A  +    +     V+ P+  RL  L + +     K       +  E+ ++   Y+G+AR+ ++   A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+   ++AY  HN+G+     +++EE   D+L +L LLSH+ SKDF+DFS     +QE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV  MV  Y E++  LP  LF  LL S++ G++    ++ R+S +AL+ LAS+H + + S+            GLEAH   +P +F    R + H+ ++E      LDA +  L  LIL ++  +  L   I  EQ     + ++RL   F +L++ + P              G A  R+ +  F+ +L AF  +VR F+Q++
Sbjct:  624 MSHVLEFETTRLAQSPGSDCVSPFVSEGLIKTITRLCATYLAPN-ILVDAGEVAPALLQVFGFQNGGRAGE-LLNFLVQKATVYLLHWPTQPVVMENLIEFL--LVLSNTRAIN-AVLSSEMWQSLVQANASAGSFITGAG----GNTS-------------PLNTAVARVPANLRGQLTEALCRAGMASTDQNMRAAHFQAVSQPLAQRLQQL-IAMPNFESKQTANDVRVQEELKLLVETYSGIARSAESASHAPITAFCLPALPVIVKIFQIFQGDSQIVNLILNFFCVLVEAQLCYLSPRDALQVYTASDDLIRAYCRHNLGKKSMLGDAEEENYVDLLALLTLLSHLVSKDFIDFSEDATTQQEQADATRASSVVADVVFSGLRQVIPLMTEQLLAYPSLSKQYFTLVTYMVEVYAEKLVSLPSELFQMLLHSLLIGMRHVSVDVVRNSFQALSELASYHWKALQSQ----------RPGLEAHRQQNPDMFMAFLRVIFHMALFEDFNPAILDACAGTLYPLILIEQARYSALAEEISREQTSMDTASQQRLAAAFAELITFLSP---------ADIATGTATTRRMRTQFKTNLYAFVAEVRGFLQVK 1196          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|953495277|emb|CEG43184.1| (xpo4_danre ame: full=exportin-4 [Plasmopara halstedii])

HSP 1 Score: 212.616 bits (540), Expect = 7.145e-55
Identity = 174/614 (28.34%), Postives = 288/614 (46.91%), Query Frame = 0
Query:   28 HLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRI----AWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVV-GGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFSAEQ-------EGKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGI---LEEQPPSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            H+  F   R    P +  +SP+L+E ++  + R   TYL+PD +L   G  AP L+Q FG E  EG+  + L      A  +L  WP+Q  V +  I     +VL+    +  + VRS+ W+ + +                  NG  G           P      R+ + LRG+L E V   G+ + +++   +   A V+ P+  RL  L + +     K       +  E+ ++  +Y+G+AR+ ++T    +      AL   + +  +  +    ++ +  F     E Q+  L     M + +A+ + ++AY  HN+G+     +++EE+  D+L +L LLSH+A+KD +DFS E        E   A   VADVVF GL ++IPLM+E+LL YP L KQYFTLV+ MV  Y E +  LP  LF  LL S++ G++    ++ R+S +AL  LA  H + + S+            GL +H+  HP +F    R +  + +++      LDA +  L  LIL ++  +  L   I    E      ++RL   F +L   + P              G A  R+ ++ F+ +L AF  +VR F+Q+R
Sbjct:  623 HVLEFETSRLARNPTNECVSPFLSEGLIESITRLCATYLIPD-NLEHKGTRAPALIQTFGFE-NEGRGGKLLYFVVEKAVIYLLHWPTQPVVMEYIIEFF--LVLSNTRAIN-SIVRSDLWQSLAQ-----------------ANGTAGTFLVGLSDNNSPLRAAVARIPTSLRGQLTEAVCRAGMTSTDSELRMTHFQA-VSQPIAIRLQQL-IKVPNVVPKQISNDVYVQEELKLLVEMYSGIARSAESTSHNLITSFCLPALPIFVQIFQVFQSDSQLVNCIFQFFCSMVETQLCFLPPCDAMQVYSASDKLIRAYRFHNLGKKSMQGDAEEESYVDLLALLTLLSHLAAKDVIDFSEESSTGVEQAEANCALSVVADVVFSGLCQVIPLMTEQLLAYPSLSKQYFTLVSYMVEVYAENLVLLPSDLFQMLLHSLLIGIRHVSLDVVRNSFQALGELACHHWRAIQSK----------KPGLNSHLQQHPDMFMIFLRVIFRMALFDNFNPVILDACAGTLYPLILIEQARYHTLAEEIGCQQENLDAGRRQRLTAAFAELTCFLTP---------ADIALGAATTRKMRMQFKTNLYAFVAEVRGFLQVR 1193          
BLAST of EWM29994.1 vs. NCBI_GenBank
Match: gi|970629605|gb|KUF76819.1| (Exportin-4 [Phytophthora nicotianae])

HSP 1 Score: 201.445 bits (511), Expect = 4.168e-51
Identity = 165/583 (28.30%), Postives = 273/583 (46.83%), Query Frame = 0
Query:   54 ILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSPSPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGVGRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFS----AEQE---GKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPP---SVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626
            I+S +  F  T L  +PS   NG           G AGE  +   ++ A  +L  WP+Q  V +  I  +  +VL+    +  + + SE W+ +++                  N   G    P+     P      R+ ++LRG+L E V    +A  +    +     V+ P+  RL  L +       K       +  E+ ++  +Y+G+AR+ ++T  A +      AL  ++ +  +       ++ +L F     E Q+  L     + + TA+   + AY  HN+G+     +++EE   D+L +L LLSH+ +KDF+DFS     +QE      A+  VADVVF GL ++IPLM+E+LL YP L KQYFTLV+ MV  Y E++  LP  LF  LL S++ G+++   ++ R+S +AL  LAS+H + + S+            GLEAH   HP +F    R +  + ++E      LD  +  L  LIL ++  +  L   I  EQ       ++RL   F +L+S + P         G    G A  R+ ++ F+ +L AF  + R F+Q++
Sbjct:  622 IMSHILEFETTRLAQNPSSDCNG-----------GRAGE-LLNFLVQKATVYLLHWPTQPVVMENLIEFL--LVLSNTRAIN-SVLNSEMWQSLVQ-----------------ANASAGSFITPTGGNATPLNTAVARVPANLRGQLTEAVCRAGMASTDQNMRAAHFQAVSQPLAQRLQQL-IATPNFESKQTANDVRVKEELKLLVEMYSGVARSTESTSHAPITTFCLPALPVIVKIFQIFQGDSQIVNLILNFFCVMVEAQLCYLSPRDALQVYTASDDLIHAYCRHNLGKKSMLGDAEEENYTDLLALLTLLSHLVAKDFIDFSEDATTQQEQADATRASSVVADVVFSGLRQVIPLMTEQLLAYPSLSKQYFTLVSYMVEVYAEKLVSLPSELFQMLLHSLLIGMRQVSVDVVRNSFQALGELASYHWKALQSQ----------RPGLEAHRQQHPDMFMAFLRVIFRMALFEDFNPVILDGCAGTLFPLILIEQARYSALAEEISREQASMDAGSQQRLAAAFAELISFLTP---------GDIATGTATTRKMRMQFKTNLYAFVAEARGFLQVK 1152          
The following BLAST results are available for this feature:
BLAST of EWM29994.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112603|gb|EWM29994.1|0.000e+0100.00exportin 4, partial [Nannochloropsis gaditana][more]
gi|695395990|ref|XP_009521321.1|1.285e-5929.17hypothetical protein PHYSODRAFT_486369 [Phytophtho... [more]
gi|675174911|ref|XP_008896340.1|1.803e-5928.78hypothetical protein PPTG_04224 [Phytophthora para... [more]
gi|568008615|gb|ETL82832.1|2.322e-5928.78hypothetical protein L917_17080, partial [Phytopht... [more]
gi|567950460|gb|ETK76171.1|2.367e-5928.78hypothetical protein L915_17353, partial [Phytopht... [more]
gi|298710877|emb|CBJ26386.1|9.167e-5839.03conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214692330|gb|OWZ06978.1|1.866e-5729.02LOW QUALITY PROTEIN: Exportin [Phytophthora megaka... [more]
gi|301112166|ref|XP_002905162.1|3.078e-5728.78exportin-4, putative [Phytophthora infestans T30-4... [more]
gi|953495277|emb|CEG43184.1|7.145e-5528.34xpo4_danre ame: full=exportin-4 [Plasmopara halste... [more]
gi|970629605|gb|KUF76819.1|4.168e-5128.30Exportin-4 [Phytophthora nicotianae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna679rna679Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications