EWM23904.1, cds6763 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|585105186|gb|EWM23904.1| (beta-hydroxyacyl-acp dehydratase precursor [Nannochloropsis gaditana]) HSP 1 Score: 407.527 bits (1046), Expect = 7.320e-144 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
Query: 1 MHLLAALVALPAMCTAFVVPLPSAPKHAVRMMADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
MHLLAALVALPAMCTAFVVPLPSAPKHAVRMMADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK
Sbjct: 1 MHLLAALVALPAMCTAFVVPLPSAPKHAVRMMADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|553184944|ref|XP_005854174.1| (3-hydroxyacyl-CoA dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422294885|gb|EKU22185.1| 3-hydroxyacyl-CoA dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 346.28 bits (887), Expect = 4.657e-120 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
Query: 32 MADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
MADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK
Sbjct: 1 MADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 171
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|1149076526|gb|AQS99235.1| (3-hydroxyacyl acyl carrier protein dehydratase [Gambierdiscus excentricus]) HSP 1 Score: 242.662 bits (618), Expect = 8.485e-78 Identity = 116/174 (66.67%), Postives = 142/174 (81.61%), Query Frame = 0
Query: 29 VRMMADGDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
R ADG+ +++G Q S +++ + ++ N VA +LPHRYPFLLVDKV+ EPGKK VG+K +TANEPQFTGHFP+RPIMPGVLMVEAMAQL G++CLQ P+SDGKG FFFAGIDG+KFR+PVVPGDTLVME+EL+KF E GIAK+KG+A+VDG AVE+KE TFAL K
Sbjct: 83 TRCKADGED---KFKGAQHYSGLTEGVPLVMDNVAVAKVLPHRYPFLLVDKVVAFEPGKKIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQDPISDGKGEFFFAGIDGIKFRRPVVPGDTLVMEMELLKFREKRGIAKMKGRAFVDGQRAVEVKEFTFALVK 253
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|1149076650|gb|AQS99297.1| (3-hydroxyacyl acyl carrier protein dehydratase [Gambierdiscus belizeanus]) HSP 1 Score: 241.506 bits (615), Expect = 2.550e-77 Identity = 112/162 (69.14%), Postives = 135/162 (83.33%), Query Frame = 0
Query: 41 EWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
EW+G S +++ + ++ N VA +LPHRYPFLLVDKV+ EPGKK VG+K +TANEPQFTGHFP+RPIMPGVLMVEAMAQL G++CLQ P+SDG+G FFFAGIDG+KFRKPVVPGDTLVME+EL+KF E GIAK+ G+A+VDG AVE+KE TFAL K
Sbjct: 96 EWKGADYFSGLTESVPLVMDNVAVAKVLPHRYPFLLVDKVVAFEPGKKIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQAPISDGQGEFFFAGIDGIKFRKPVVPGDTLVMEMELLKFREKRGIAKMTGRAFVDGKRAVEVKEFTFALVK 257
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|873219238|emb|CEM37968.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 230.335 bits (586), Expect = 1.814e-73 Identity = 104/161 (64.60%), Postives = 130/161 (80.75%), Query Frame = 0
Query: 42 WRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
WR + S ++ D+ ++ E + +LPHRYPFLLVDKVIE EPGK+AVG+K I+ANEPQFTGHFPER IMPGVL +EAMAQL G++CLQ P+SDGKG FFFAG+DGV++++PVVPGD LVME+EL+ + FGIAK+ G YVDG AVE+KE TFAL+K
Sbjct: 65 WRSAASVSELTSDVPVVMDIEAIRKVLPHRYPFLLVDKVIEFEPGKRAVGVKTISANEPQFTGHFPERAIMPGVLQIEAMAQLGGLVCLQEPLSDGKGDFFFAGVDGVRWKRPVVPGDVLVMEMELLSWRAKFGIAKMTGAGYVDGQKAVEVKEFTFALAK 225
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|397641691|gb|EJK74799.1| (hypothetical protein THAOC_03501 [Thalassiosira oceanica]) HSP 1 Score: 232.261 bits (591), Expect = 2.589e-73 Identity = 115/204 (56.37%), Postives = 153/204 (75.00%), Query Frame = 0
Query: 1 MHLLAALVALPAMCTAFVVPLPSAPKHAVRMMAD--GDAAGAEWRGGQAASAVSKDLKTLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
M LA + L A AF+ P SA + ++ ++ D AE+RG Q SA++ D+KT + E++A +LPHRYPFLLVDKV+E E GK+AVGIK +T NEP FTGHFP+RPIMPGVL VEA+AQL+G++CLQ ++ +FFFAG+DGVK++KPVVPGDTLVMEVE+ K+ + FGIA G+A+VDG++AVE+ EM FAL+K
Sbjct: 87 MKSLALVGTLLASTGAFMAP--SARRAPTQLFSEEAADETTAEYRGAQVISALTADVKTQFSLEDIAKVLPHRYPFLLVDKVVEYEMGKRAVGIKSVTLNEPHFTGHFPDRPIMPGVLQVEALAQLAGIICLQMEGAEPGAVFFFAGVDGVKWKKPVVPGDTLVMEVEIKKWNKRFGIATATGRAFVDGEMAVELDEMKFALAK 288
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|237844801|ref|XP_002371698.1| (beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii ME49] >gi|3850997|gb|AAC72191.1| beta-hydroxyacyl-ACP dehydratase precursor [Toxoplasma gondii] >gi|95007480|emb|CAJ20702.1| beta-hydroxyacyl-acp dehydratase precursor [Toxoplasma gondii RH] >gi|523570903|gb|EPR57817.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii GT1] >gi|527315633|gb|EPT32247.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii ME49] >gi|557733441|gb|ESS29593.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii VEG] >gi|672250842|gb|KFG28066.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii p89] >gi|672253794|gb|KFG29871.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii GAB2-2007-GAL-DOM2] >gi|672259677|gb|KFG34420.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii FOU] >gi|672295803|gb|KFG60430.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii RUB] >gi|672563076|gb|KFH03881.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii MAS] >gi|672565007|gb|KFH05410.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii VAND] >gi|820696076|tpe|CEL71813.1| TPA: (3R)-hydroxymyristoyl ACP dehydrase, putative [Toxoplasma gondii VEG] >gi|1005152176|gb|KYF41172.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii ARI] >gi|1008951554|gb|KYK68686.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Toxoplasma gondii TgCatPRC2]) HSP 1 Score: 220.705 bits (561), Expect = 1.702e-69 Identity = 107/190 (56.32%), Postives = 138/190 (72.63%), Query Frame = 0
Query: 21 LPSAPKHAVRMMADG-------DAAGAEWRGGQAASAVSKDLKT-LLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
LP HA R ++ + + WRG + S +++ + E + ILPHR+PFLLVDKV+E EPGK+AVG+KQI+ANE QF GHFP R I+PGVL VEA+AQL+G++ LQPP+S+G+G FFFAG+DGVK++KPVVPGDTLVMEVEL + E FGIAK GKA+VDG A+E+ EMTFAL +
Sbjct: 42 LPGCSAHAGRGISTSRLDPPSVTSLSSAWRGAKEISGLTESTANPVFDVEKIREILPHRFPFLLVDKVLEFEPGKRAVGVKQISANEDQFNGHFPHRAILPGVLQVEALAQLAGIVALQPPISNGQGNFFFAGVDGVKWKKPVVPGDTLVMEVELTAWKEKFGIAKATGKAFVDGKPAIEVGEMTFALVR 231
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|401397120|ref|XP_003879985.1| (hypothetical protein NCLIV_004340 [Neospora caninum Liverpool] >gi|325114393|emb|CBZ49950.1| hypothetical protein NCLIV_004340 [Neospora caninum Liverpool] >gi|820688787|tpe|CEL64538.1| TPA: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase,related [Neospora caninum Liverpool]) HSP 1 Score: 218.394 bits (555), Expect = 1.309e-68 Identity = 101/164 (61.59%), Postives = 129/164 (78.66%), Query Frame = 0
Query: 40 AEWRGGQAASAVSKDLKT-LLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
+ WRG + S +++ + E + ILPHR+PFLLVDKV+E EPGK+AVG+KQI+ANE QF GHFP R IMPGVL VEA+AQL+G++ LQPP+S+G+G FFFAG+DGVK++KPVVPGDT+VMEVEL + E FGIAK GKA+VDG +E+ EMTFAL +
Sbjct: 69 STWRGAKEISGLTESTAAPVFDVEKIRQILPHRFPFLLVDKVLEFEPGKRAVGVKQISANEDQFNGHFPNRAIMPGVLQVEALAQLAGIVALQPPISNGQGNFFFAGVDGVKWKKPVVPGDTVVMEVELTAWKEKFGIAKATGKAFVDGKPVIEVGEMTFALVR 232
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|675133210|ref|XP_008888492.1| (beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Hammondia hammondi] >gi|661332742|gb|KEP60911.1| beta-hydroxyacyl-acyl carrier protein dehydratase (FABZ) [Hammondia hammondi]) HSP 1 Score: 218.009 bits (554), Expect = 1.919e-68 Identity = 102/162 (62.96%), Postives = 128/162 (79.01%), Query Frame = 0
Query: 42 WRGGQAASAVSKDLKT-LLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
WRG + S +++ + E + ILPHR+PFLLVDKV+E EPGK+AVG+KQI+ANE QF GHFP R IMPGVL VEA+AQL+G++ LQPP+S+G+G FFFAG+DGVK++KPVVPGDTLVMEVEL + E FGIAK GKA+VDG +E+ EMTFAL +
Sbjct: 70 WRGAKEISGLTESTAGPVFDVEKIREILPHRFPFLLVDKVLEFEPGKRAVGVKQISANEDQFNGHFPHRAIMPGVLQVEALAQLAGIVALQPPISNGQGNFFFAGVDGVKWKKPVVPGDTLVMEVELTAWKEKFGIAKATGKAFVDGKPVIEVGEMTFALVR 231
BLAST of EWM23904.1 vs. NCBI_GenBank
Match: gi|916427034|ref|XP_013234748.1| ((3R)-hydroxymyristoyl ACP dehydrase, putative [Eimeria tenella] >gi|557149642|emb|CDJ43999.1| (3R)-hydroxymyristoyl ACP dehydrase, putative [Eimeria tenella]) HSP 1 Score: 216.083 bits (549), Expect = 3.161e-67 Identity = 99/162 (61.11%), Postives = 128/162 (79.01%), Query Frame = 0
Query: 42 WRGGQAASAVSKDLKT-LLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGVKFRKPVVPGDTLVMEVELVKFMESFGIAKLKGKAYVDGDVAVEIKEMTFALSK 202
+R S+++ ++T T E + ILPHRYPFLLVDKV+ E GK+AVG+K I+ NE QF GHFPER +MPGVL VEA+AQL+GV+ LQPP+SDGKG+FFFAG +GVK++KPV+PGD+LVME ELV + E FGIAK KG+ +VDG +AVE++EMTFA +
Sbjct: 104 YRDASWVSSLTSSVRTPAFTAEQIKQILPHRYPFLLVDKVVFFEAGKRAVGVKNISNNENQFNGHFPERAVMPGVLQVEALAQLAGVVALQPPLSDGKGIFFFAGANGVKWKKPVLPGDSLVMEAELVTWKEKFGIAKFKGRGFVDGQLAVEVEEMTFAFGR 265 The following BLAST results are available for this feature:
BLAST of EWM23904.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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