EWM23923.1, cds6751 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|585105208|gb|EWM23923.1| (phosphatidylinositol n-acetylglucosaminyltransferase subunit h [Nannochloropsis gaditana]) HSP 1 Score: 439.113 bits (1128), Expect = 5.394e-156 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MTRWRSPTPSSKRKKPELLYRGKKHAAICLHEFARRSSPGSTLFSKRAFVSRSLRPTAIVVLIAAFLGGNYADVKSFFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASRSLFCTKL 214
MTRWRSPTPSSKRKKPELLYRGKKHAAICLHEFARRSSPGSTLFSKRAFVSRSLRPTAIVVLIAAFLGGNYADVKSFFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASRSLFCTKL
Sbjct: 1 MTRWRSPTPSSKRKKPELLYRGKKHAAICLHEFARRSSPGSTLFSKRAFVSRSLRPTAIVVLIAAFLGGNYADVKSFFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASRSLFCTKL 214
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|298709636|emb|CBJ31445.1| (glycosyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 94.7449 bits (234), Expect = 3.523e-20 Identity = 38/88 (43.18%), Postives = 66/88 (75.00%), Query Frame = 0
Query: 111 IETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
+ E +L++ +LG+Q+ T+Y +G+EK+ F+D ++ ++INEGIT R+V+YLAF+V GR+ +++AF++LQP L L+ VY+ RA +
Sbjct: 62 VREEFLLVVRELGVQVTTKYVDGREKTTFLDKAKIKAILINEGITMHRVVFYLAFVVAGRDKMVVAFENLQPRLNVLIKVYRGTRAAI 149
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|551647747|ref|XP_005826657.1| (hypothetical protein GUITHDRAFT_114173 [Guillardia theta CCMP2712] >gi|428170755|gb|EKX39677.1| hypothetical protein GUITHDRAFT_114173 [Guillardia theta CCMP2712]) HSP 1 Score: 82.8037 bits (203), Expect = 3.419e-16 Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = 0
Query: 77 FFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASR 207
+ L S +++L + V+F L R ++ +E ES+L+++DLG+Q++ RY +G+E+ FV+ + V+INEGI + + YYLA I + + +L+ F L PCL+DLL S G + +G +
Sbjct: 49 YILDCSVGLFLLQWLSLVLFILYR------RRQMMERESLLVVHDLGIQVRRRYYSGKEEFFFVERSRIEDVIINEGIGYATVTYYLAIITKSEKEMLLGFSTLIPCLDDLLTDSNSKSNRAGMLKQGTEK 173
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|1160559779|ref|XP_020432441.1| (putative glycosyltransferase [Polysphondylium pallidum PN500] >gi|281206132|gb|EFA80321.1| putative glycosyltransferase [Polysphondylium pallidum PN500]) HSP 1 Score: 81.2629 bits (199), Expect = 1.571e-15 Identity = 36/120 (30.00%), Postives = 76/120 (63.33%), Query Frame = 0
Query: 77 FFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARA 196
F+L ++ + ++L F ++ ++ +I +K + ES+ +I +LG+QL+ +Y E + F++ ++ ++INEGI+ R+ +Y+AF+VEG++ +++AF L P + LL +Y+ R+
Sbjct: 72 FYLVINDY-FVLNSFMFILLSIVIIIRLFLKLFIVREESLTVIRELGVQLRKKYYFIGESTRFIEKPKIQSIIINEGISRYRVTFYMAFLVEGKQKMVLAFDDLIPRINVLLKIYRGTRS 190
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|1032641738|gb|OAQ23121.1| (hypothetical protein K457DRAFT_25381 [Mortierella elongata AG-77]) HSP 1 Score: 80.4925 bits (197), Expect = 1.845e-15 Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 0
Query: 76 SFFLALSPW--IYILGGF--ASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
FFL L +YILG A V AL L+ K + E++L+I D+G+Q++T Y G+ S F+D + ++INE IT I Y+A IVEG + +++ FQ+L P L LL Y AR+ +
Sbjct: 28 DFFLVLFSLCLVYILGTTYTAYAVIALFLLLRIVFKSFMVMEETILVIRDVGVQVKTVYLGGRSVSRFIDRSKIADIIINEAITMFHIRVYMAIIVEGEDKMVVVFQNLLPRLNVLLQAYHGARSII 154
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|595498070|gb|EXX78290.1| (hypothetical protein RirG_016340 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 81.2629 bits (199), Expect = 1.867e-15 Identity = 35/88 (39.77%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 111 IETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
++ ES+L I D+G+Q++T Y NG+ S+F+D + ++INEGIT ++ +Y+A IV+G++ +++ F+HL P L LL VY+ R +
Sbjct: 93 VKEESILSIRDVGIQVKTIYMNGRSVSKFIDKSKISDIIINEGITMLQVKFYMAIIVDGQDRMVVVFEHLLPKLNILLQVYRGTRYVI 180
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|672817102|gb|KFH62009.1| (hypothetical protein MVEG_12163 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 79.337 bits (194), Expect = 4.146e-15 Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 0
Query: 84 WIYILGGFASVVFALTRLISSHI--KQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
++Y LG + A+T + S I K + E++L+I D+G+Q++T Y G+ S F+D ++ ++INE IT I Y+A IVEG++ +++ FQ+L P L LL Y AR+ +
Sbjct: 38 FVYFLGPSYTCYTAITLIAISRIAIKFFMVTEETILVIRDVGIQVKTVYLGGRSVSRFIDRSKIQDIIINEAITMMHIRVYMAIIVEGQDKMVVVFQNLLPRLNVLLQAYHGARSII 154
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|831755805|ref|XP_012748528.1| (hypothetical protein SAMD00019534_116650, partial [Acytostelium subglobosum LB1] >gi|735849357|dbj|GAM28489.1| hypothetical protein SAMD00019534_116650, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 79.337 bits (194), Expect = 4.568e-15 Identity = 38/98 (38.78%), Postives = 64/98 (65.31%), Query Frame = 0
Query: 106 IKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHE 203
+K I ES+ +I +LG+QL+ +Y +E EF++ + ++INEGI+ R+VYY+AFIVEG++ +++AF L P + LL +Y+ RA + +E
Sbjct: 67 LKMFIIREESLTVIRELGIQLRKKYL-LKETVEFIEKSRISSIIINEGISRYRVVYYMAFIVEGKQKMILAFDDLIPRINVLLKIYRGTRALMYGENE 163
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|1183503027|gb|ORZ26647.1| (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 78.9518 bits (193), Expect = 7.635e-15 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 0
Query: 111 IETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
+ E++L+I D+G+Q++T Y G+ S F+D + ++INE IT I Y+A IVEG + +++ FQHL P L LL Y AR+ +
Sbjct: 68 VTEETILVIRDVGVQVKTVYLGGRSSSRFIDRSKITDIIINEAITMMHIRVYMAIIVEGEDRMVVVFQHLLPRLNVLLQAYHGARSII 155
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|857978899|emb|CEO95137.1| (hypothetical protein PBRA_003903 [Plasmodiophora brassicae]) HSP 1 Score: 77.411 bits (189), Expect = 2.177e-14 Identity = 41/110 (37.27%), Postives = 69/110 (62.73%), Query Frame = 0
Query: 93 SVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV--GP 200
+V A+ R+ ++ C ES+L++ +LG+Q+ + +G+ F+D + +VINEGIT R+++Y+AFIVEG+ +++AF L P + LLP+Y+ RA V GP
Sbjct: 61 AVGMAVWRVTAAMSSVCE---ESLLVVQELGVQITRKTYSGKSSHIFIDKDKISSIVINEGITAWRVIFYMAFIVEGQSDMVLAFSLL-PRMAVLLPIYRGIRAAVYGGP 166 The following BLAST results are available for this feature:
BLAST of EWM23923.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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