EWM23923.1, cds6751 (CDS) Nannochloropsis gaditana

Overview
NameEWM23923.1
Unique Namecds6751
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:453023..453162 -
Alignment locationCM002469.1:452861..452945 -
Alignment locationCM002469.1:452643..452757 -
Alignment locationCM002469.1:452365..452438 -
Alignment locationCM002469.1:452150..452269 -
Alignment locationCM002469.1:451908..452018 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23923.1
Productphosphatidylinositol n-acetylglucosaminyltransferase subunit h
Orig transcript idgnl|cribi|Naga_100082g8.9355.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:453023..453162 -
CM002469.1supercontigCM002469.1:452861..452945 -
CM002469.1supercontigCM002469.1:452643..452757 -
CM002469.1supercontigCM002469.1:452365..452438 -
CM002469.1supercontigCM002469.1:452150..452269 -
CM002469.1supercontigCM002469.1:451908..452018 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0017176phosphatidylinositol N-acetylglucosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR019328GPI-GlcNAc_Trfase_PIG-H_dom
Homology
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|585105208|gb|EWM23923.1| (phosphatidylinositol n-acetylglucosaminyltransferase subunit h [Nannochloropsis gaditana])

HSP 1 Score: 439.113 bits (1128), Expect = 5.394e-156
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query:    1 MTRWRSPTPSSKRKKPELLYRGKKHAAICLHEFARRSSPGSTLFSKRAFVSRSLRPTAIVVLIAAFLGGNYADVKSFFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASRSLFCTKL 214
            MTRWRSPTPSSKRKKPELLYRGKKHAAICLHEFARRSSPGSTLFSKRAFVSRSLRPTAIVVLIAAFLGGNYADVKSFFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASRSLFCTKL
Sbjct:    1 MTRWRSPTPSSKRKKPELLYRGKKHAAICLHEFARRSSPGSTLFSKRAFVSRSLRPTAIVVLIAAFLGGNYADVKSFFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASRSLFCTKL 214          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|298709636|emb|CBJ31445.1| (glycosyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 94.7449 bits (234), Expect = 3.523e-20
Identity = 38/88 (43.18%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  111 IETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
            +  E +L++ +LG+Q+ T+Y +G+EK+ F+D   ++ ++INEGIT  R+V+YLAF+V GR+ +++AF++LQP L  L+ VY+  RA +
Sbjct:   62 VREEFLLVVRELGVQVTTKYVDGREKTTFLDKAKIKAILINEGITMHRVVFYLAFVVAGRDKMVVAFENLQPRLNVLIKVYRGTRAAI 149          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|551647747|ref|XP_005826657.1| (hypothetical protein GUITHDRAFT_114173 [Guillardia theta CCMP2712] >gi|428170755|gb|EKX39677.1| hypothetical protein GUITHDRAFT_114173 [Guillardia theta CCMP2712])

HSP 1 Score: 82.8037 bits (203), Expect = 3.419e-16
Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   77 FFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHEGASR 207
            + L  S  +++L   + V+F L R      ++  +E ES+L+++DLG+Q++ RY +G+E+  FV+   +  V+INEGI +  + YYLA I +  + +L+ F  L PCL+DLL    S     G + +G  +
Sbjct:   49 YILDCSVGLFLLQWLSLVLFILYR------RRQMMERESLLVVHDLGIQVRRRYYSGKEEFFFVERSRIEDVIINEGIGYATVTYYLAIITKSEKEMLLGFSTLIPCLDDLLTDSNSKSNRAGMLKQGTEK 173          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|1160559779|ref|XP_020432441.1| (putative glycosyltransferase [Polysphondylium pallidum PN500] >gi|281206132|gb|EFA80321.1| putative glycosyltransferase [Polysphondylium pallidum PN500])

HSP 1 Score: 81.2629 bits (199), Expect = 1.571e-15
Identity = 36/120 (30.00%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   77 FFLALSPWIYILGGFASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARA 196
            F+L ++ + ++L  F  ++ ++  +I   +K   +  ES+ +I +LG+QL+ +Y    E + F++   ++ ++INEGI+  R+ +Y+AF+VEG++ +++AF  L P +  LL +Y+  R+
Sbjct:   72 FYLVINDY-FVLNSFMFILLSIVIIIRLFLKLFIVREESLTVIRELGVQLRKKYYFIGESTRFIEKPKIQSIIINEGISRYRVTFYMAFLVEGKQKMVLAFDDLIPRINVLLKIYRGTRS 190          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|1032641738|gb|OAQ23121.1| (hypothetical protein K457DRAFT_25381 [Mortierella elongata AG-77])

HSP 1 Score: 80.4925 bits (197), Expect = 1.845e-15
Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 0
Query:   76 SFFLALSPW--IYILGGF--ASVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
             FFL L     +YILG    A  V AL  L+    K   +  E++L+I D+G+Q++T Y  G+  S F+D   +  ++INE IT   I  Y+A IVEG + +++ FQ+L P L  LL  Y  AR+ +
Sbjct:   28 DFFLVLFSLCLVYILGTTYTAYAVIALFLLLRIVFKSFMVMEETILVIRDVGVQVKTVYLGGRSVSRFIDRSKIADIIINEAITMFHIRVYMAIIVEGEDKMVVVFQNLLPRLNVLLQAYHGARSII 154          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|595498070|gb|EXX78290.1| (hypothetical protein RirG_016340 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 81.2629 bits (199), Expect = 1.867e-15
Identity = 35/88 (39.77%), Postives = 61/88 (69.32%), Query Frame = 0
Query:  111 IETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
            ++ ES+L I D+G+Q++T Y NG+  S+F+D   +  ++INEGIT  ++ +Y+A IV+G++ +++ F+HL P L  LL VY+  R  +
Sbjct:   93 VKEESILSIRDVGIQVKTIYMNGRSVSKFIDKSKISDIIINEGITMLQVKFYMAIIVDGQDRMVVVFEHLLPKLNILLQVYRGTRYVI 180          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|672817102|gb|KFH62009.1| (hypothetical protein MVEG_12163 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 79.337 bits (194), Expect = 4.146e-15
Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 0
Query:   84 WIYILGGFASVVFALTRLISSHI--KQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
            ++Y LG   +   A+T +  S I  K   +  E++L+I D+G+Q++T Y  G+  S F+D   ++ ++INE IT   I  Y+A IVEG++ +++ FQ+L P L  LL  Y  AR+ +
Sbjct:   38 FVYFLGPSYTCYTAITLIAISRIAIKFFMVTEETILVIRDVGIQVKTVYLGGRSVSRFIDRSKIQDIIINEAITMMHIRVYMAIIVEGQDKMVVVFQNLLPRLNVLLQAYHGARSII 154          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|831755805|ref|XP_012748528.1| (hypothetical protein SAMD00019534_116650, partial [Acytostelium subglobosum LB1] >gi|735849357|dbj|GAM28489.1| hypothetical protein SAMD00019534_116650, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 79.337 bits (194), Expect = 4.568e-15
Identity = 38/98 (38.78%), Postives = 64/98 (65.31%), Query Frame = 0
Query:  106 IKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFVGPVHE 203
            +K   I  ES+ +I +LG+QL+ +Y   +E  EF++   +  ++INEGI+  R+VYY+AFIVEG++ +++AF  L P +  LL +Y+  RA +   +E
Sbjct:   67 LKMFIIREESLTVIRELGIQLRKKYL-LKETVEFIEKSRISSIIINEGISRYRVVYYMAFIVEGKQKMILAFDDLIPRINVLLKIYRGTRALMYGENE 163          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|1183503027|gb|ORZ26647.1| (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein [Lobosporangium transversale])

HSP 1 Score: 78.9518 bits (193), Expect = 7.635e-15
Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 0
Query:  111 IETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV 198
            +  E++L+I D+G+Q++T Y  G+  S F+D   +  ++INE IT   I  Y+A IVEG + +++ FQHL P L  LL  Y  AR+ +
Sbjct:   68 VTEETILVIRDVGVQVKTVYLGGRSSSRFIDRSKITDIIINEAITMMHIRVYMAIIVEGEDRMVVVFQHLLPRLNVLLQAYHGARSII 155          
BLAST of EWM23923.1 vs. NCBI_GenBank
Match: gi|857978899|emb|CEO95137.1| (hypothetical protein PBRA_003903 [Plasmodiophora brassicae])

HSP 1 Score: 77.411 bits (189), Expect = 2.177e-14
Identity = 41/110 (37.27%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   93 SVVFALTRLISSHIKQCNIETESMLLINDLGLQLQTRYTNGQEKSEFVDLGSVRGVVINEGITHQRIVYYLAFIVEGRESLLIAFQHLQPCLEDLLPVYQSARAFV--GP 200
            +V  A+ R+ ++    C    ES+L++ +LG+Q+  +  +G+    F+D   +  +VINEGIT  R+++Y+AFIVEG+  +++AF  L P +  LLP+Y+  RA V  GP
Sbjct:   61 AVGMAVWRVTAAMSSVCE---ESLLVVQELGVQITRKTYSGKSSHIFIDKDKISSIVINEGITAWRVIFYMAFIVEGQSDMVLAFSLL-PRMAVLLPIYRGIRAAVYGGP 166          
The following BLAST results are available for this feature:
BLAST of EWM23923.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105208|gb|EWM23923.1|5.394e-156100.00phosphatidylinositol n-acetylglucosaminyltransfera... [more]
gi|298709636|emb|CBJ31445.1|3.523e-2043.18glycosyltransferase [Ectocarpus siliculosus][more]
gi|551647747|ref|XP_005826657.1|3.419e-1633.59hypothetical protein GUITHDRAFT_114173 [Guillardia... [more]
gi|1160559779|ref|XP_020432441.1|1.571e-1530.00putative glycosyltransferase [Polysphondylium pall... [more]
gi|1032641738|gb|OAQ23121.1|1.845e-1537.80hypothetical protein K457DRAFT_25381 [Mortierella ... [more]
gi|595498070|gb|EXX78290.1|1.867e-1539.77hypothetical protein RirG_016340 [Rhizophagus irre... [more]
gi|672817102|gb|KFH62009.1|4.146e-1535.90hypothetical protein MVEG_12163 [Mortierella verti... [more]
gi|831755805|ref|XP_012748528.1|4.568e-1538.78hypothetical protein SAMD00019534_116650, partial ... [more]
gi|1183503027|gb|ORZ26647.1|7.635e-1539.77GPI-GlcNAc transferase complex, PIG-H component-do... [more]
gi|857978899|emb|CEO95137.1|2.177e-1437.27hypothetical protein PBRA_003903 [Plasmodiophora b... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6767rna6767Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications