EWM23929.1, cds6742 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|585105214|gb|EWM23929.1| (uridine kinase [Nannochloropsis gaditana]) HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0 Query: 1 MSPGSSAKPLELLFVFLLGAAVAWSLLAGRSSSRGVTHKRKAHDPTCRQEDEEDDVQEVKSGFLAYLPSPVGPLLPLRHGVSATPLEEPQGLGKETMGPLLESLEQPVKAPRQSTSGPLTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQAEVGEHLGHLGSSTSPDKDSQSPKRKAYIALGKQGSLSLGNNMGPARTRGESEAKNANLSHLKVFGSK 382 MSPGSSAKPLELLFVFLLGAAVAWSLLAGRSSSRGVTHKRKAHDPTCRQEDEEDDVQEVKSGFLAYLPSPVGPLLPLRHGVSATPLEEPQGLGKETMGPLLESLEQPVKAPRQSTSGPLTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQAEVGEHLGHLGSSTSPDKDSQSPKRKAYIALGKQGSLSLGNNMGPARTRGESEAKNANLSHLKVFGSK Sbjct: 1 MSPGSSAKPLELLFVFLLGAAVAWSLLAGRSSSRGVTHKRKAHDPTCRQEDEEDDVQEVKSGFLAYLPSPVGPLLPLRHGVSATPLEEPQGLGKETMGPLLESLEQPVKAPRQSTSGPLTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQAEVGEHLGHLGSSTSPDKDSQSPKRKAYIALGKQGSLSLGNNMGPARTRGESEAKNANLSHLKVFGSK 382
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|647304615|ref|WP_025745951.1| (uridine kinase [bacterium JKG1]) HSP 1 Score: 269.24 bits (687), Expect = 5.464e-86 Identity = 123/206 (59.71%), Postives = 160/206 (77.67%), Query Frame = 0 Query: 116 SGPLTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPL-GMNQVALDMFLSRLQAEVGEH 320 S P+ +GVAGG+GSGKTT +RA+ + +G + Y+ HDSYY+DLSHL +ER + NFDHP+ALD ALL+EHL AL G V VP YDF HNR T P+PV+LLEGILIF DR+L + + IK++VDT++DLR IRRI RD+KERGRSLES++DQY++TVRPMHLEFVEPSKR AD+IIP G+N +A+DM ++R++ + H Sbjct: 2 SKPIIIGVAGGTGSGKTTVSRAILQRVGPSRIAYLQHDSYYRDLSHLTLEERAQVNFDHPDALDNALLIEHLDALAAGRAVAVPIYDFTRHNRKGETRTVHPQPVVLLEGILIFVDRALRERMDIKIYVDTDADLRFIRRIQRDIKERGRSLESVIDQYLRTVRPMHLEFVEPSKRYADIIIPRGGLNSIAIDMVVARIEGMLAAH 207
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|1173935822|gb|OQR86877.1| (uridine kinase [Achlya hypogyna]) HSP 1 Score: 263.462 bits (672), Expect = 5.729e-83 Identity = 122/215 (56.74%), Postives = 168/215 (78.14%), Query Frame = 0 Query: 108 VKAPRQSTSGP---LTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQAEVGE 319 ++ PR+ + G L +GV GG+GSGKTT +RA+ EA+GE++V+Y++HD YY+D+S+ ++R + NFDHP++L+T+LLV HL AL+ G TVEVP YDFATH+R T PR VIL+EGIL+F D +LV + IKVFV+T SD+R IRR+ RD+ ERGR+ ES++DQY+KTVRPMHL FVEPSKR AD+I+P+G+N VALD+ +SRL++ E Sbjct: 66 IQIPRRGSVGDEDILVIGVCGGTGSGKTTLSRAIIEAIGEDNVSYLSHDYYYRDISNRTLEQRAQHNFDHPDSLETSLLVRHLEALREGITVEVPMYDFATHSRCTTTQTMVPRRVILVEGILLFTDPALVALMDIKVFVETPSDIRFIRRLRRDIAERGRTAESVIDQYLKTVRPMHLTFVEPSKRVADIIVPVGVNAVALDLIISRLRSYCPE 280
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|669145996|ref|XP_008608560.1| (hypothetical protein SDRG_04660 [Saprolegnia diclina VS20] >gi|530739991|gb|EQC38233.1| hypothetical protein SDRG_04660 [Saprolegnia diclina VS20]) HSP 1 Score: 263.462 bits (672), Expect = 6.049e-83 Identity = 123/215 (57.21%), Postives = 166/215 (77.21%), Query Frame = 0 Query: 108 VKAPRQSTSGP---LTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQAEVGE 319 +K PR+ + GP L +GV GG+GSGKTT +RA+ E +GE +V+Y++HD YY+D+S+ ++R + NFDHP++L+T+LLV HL AL+ G TVEVP YDFATH+R T PR VIL+EGIL+F D LV + IKVFV+T SD+R IRR+ RD+ ERGR+ ES++DQY+KTVRPMHL FVEPSKR AD+I+P+G+N VALD+ +SRL++ E Sbjct: 64 IKIPRRGSVGPNDILVIGVCGGTGSGKTTLSRAIMEEIGEANVSYLSHDYYYRDISNRTLEQRAQHNFDHPDSLETSLLVRHLEALRDGVTVEVPMYDFATHSRCADTQTMVPRRVILVEGILLFTDPDLVALMDIKVFVETPSDIRFIRRLRRDIAERGRTAESVIDQYLKTVRPMHLTFVEPSKRVADIIVPVGVNAVALDLIISRLRSYCPE 278
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|813177445|ref|XP_012205192.1| (hypothetical protein SPRG_10843 [Saprolegnia parasitica CBS 223.65] >gi|641529908|gb|KDO24056.1| hypothetical protein SPRG_10843 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 261.151 bits (666), Expect = 5.465e-82 Identity = 122/215 (56.74%), Postives = 165/215 (76.74%), Query Frame = 0 Query: 108 VKAPRQSTSGP---LTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQAEVGE 319 +K PR+ + GP L +GV GG+GSGKTT +RA+ E +GE +V+Y++HD YY+D+S+ ++R + NFDHP++L+T+LLV HL AL+ G TVEVP YD ATH+R T PR VIL+EGIL+F D LV + IKVFV+T SD+R IRR+ RD+ ERGR+ ES++DQY+KTVRPMHL FVEPSKR AD+I+P+G+N VALD+ +SRL++ E Sbjct: 64 IKIPRRGSVGPNDILVIGVCGGTGSGKTTLSRAIIEEIGEANVSYLSHDYYYRDISNRTLEQRAQHNFDHPDSLETSLLVRHLEALRDGVTVEVPMYDLATHSRCADTQTMVPRRVILVEGILLFTDPDLVALMDIKVFVETPSDIRFIRRLRRDIAERGRTAESVIDQYLKTVRPMHLTFVEPSKRVADIIVPVGVNAVALDLIISRLRSYCPE 278
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|922070841|ref|WP_053335176.1| (uridine kinase [Thermoanaerobaculum aquaticum]) HSP 1 Score: 256.914 bits (655), Expect = 2.875e-81 Identity = 125/213 (58.69%), Postives = 159/213 (74.65%), Query Frame = 0 Query: 110 APRQSTSGP------LTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPL-GMNQVALDMFLSRLQA 315 A RQ P + +GVAGG+GSGKTT A A+ +G + YI HDSYY+DLSHLP +ER + NFDHP+AL++ LLV HL ALKRG VE+P YDF TH R T + EPR VIL+EGILIFA+++L ++ I++FVDT++DLR IRR+ RD+ ERGR++ES++ QY+ TVRPMHLEFVEPSKR ADVIIP G N VALDM +R++A Sbjct: 2 ARRQDRGAPGGLGKVVCIGVAGGTGSGKTTVAEAIVSRIGPHRIAYIQHDSYYRDLSHLPPEERIRRNFDHPDALESELLVTHLLALKRGEAVEIPVYDFTTHVRTATTRRVEPRKVILVEGILIFAEKALREQFDIRIFVDTDADLRFIRRLRRDIAERGRTVESVISQYLDTVRPMHLEFVEPSKRWADVIIPEGGFNTVALDMVCARVEA 214
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|632136430|gb|KDA53254.1| (uridine kinase [Thermoanaerobaculum aquaticum]) HSP 1 Score: 256.144 bits (653), Expect = 4.638e-81 Identity = 121/198 (61.11%), Postives = 155/198 (78.28%), Query Frame = 0 Query: 119 LTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPL-GMNQVALDMFLSRLQA 315 + +GVAGG+GSGKTT A A+ +G + YI HDSYY+DLSHLP +ER + NFDHP+AL++ LLV HL ALKRG VE+P YDF TH R T + EPR VIL+EGILIFA+++L ++ I++FVDT++DLR IRR+ RD+ ERGR++ES++ QY+ TVRPMHLEFVEPSKR ADVIIP G N VALDM +R++A Sbjct: 5 VCIGVAGGTGSGKTTVAEAIVSRIGPHRIAYIQHDSYYRDLSHLPPEERIRRNFDHPDALESELLVTHLLALKRGEAVEIPVYDFTTHVRTATTRRVEPRKVILVEGILIFAEKALREQFDIRIFVDTDADLRFIRRLRRDIAERGRTVESVISQYLDTVRPMHLEFVEPSKRWADVIIPEGGFNTVALDMVCARVEA 202
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|673039903|ref|XP_008873912.1| (uridine kinase [Aphanomyces invadans] >gi|574470693|gb|ETV97703.1| uridine kinase [Aphanomyces invadans]) HSP 1 Score: 254.988 bits (650), Expect = 1.482e-79 Identity = 116/202 (57.43%), Postives = 158/202 (78.22%), Query Frame = 0 Query: 114 STSGPLTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPLGMNQVALDMFLSRLQA 315 ST L +GV GGSGSGKTT ++A+ + +G+ V+Y++HD YYKDLSHL ++R + NFDHP+ALDTALLV HL LK G ++P YDF+TH+RL T P+ VIL+EGIL+F D LV+ + IKVFV+T SD+R IRR+ RD++ERGR+ ES+++QY+ TVRPMHL FVEPSKR AD+++P+G+N VAL++ LSRL++ Sbjct: 73 STDDILVIGVCGGSGSGKTTLSKAIIDDIGDNAVSYLSHDFYYKDLSHLSMEQRAEHNFDHPDALDTALLVSHLAKLKHGIACDIPMYDFSTHSRLATTQHMTPKSVILIEGILLFTDPELVKLMDIKVFVETPSDVRFIRRLKRDIRERGRTAESVIEQYMTTVRPMHLLFVEPSKRVADILVPVGVNAVALELILSRLRS 274
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|504245797|ref|WP_014432899.1| (uridine kinase [Caldilinea aerophila] >gi|381382844|dbj|BAL99660.1| uridine kinase [Caldilinea aerophila DSM 14535 = NBRC 104270]) HSP 1 Score: 250.751 bits (639), Expect = 6.376e-79 Identity = 113/202 (55.94%), Postives = 161/202 (79.70%), Query Frame = 0 Query: 119 LTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPL-GMNQVALDMFLSRLQAEVGE 319 +GVAGG+GSGKTT +R ++EA+G E + YI HD+YYKD SHL ++R +N+DHP++L+T+LLVEHL+ L+ G V++P YDF+ HNR K+T + EP VIL+EGILIF + +L + + +++FVDT++D+R IRR+ RD+ ERGR+L+S+V QY+ TVRPMHLEFVEPSKR AD+I+P G N+VA++M +SR+QA + E Sbjct: 13 FVIGVAGGTGSGKTTVSRRIWEAVGRERIAYIQHDNYYKDQSHLTLEQRALTNYDHPDSLETSLLVEHLKTLRAGRPVDIPVYDFSIHNRSKQTLRIEPAKVILVEGILIFVEPALREMMDMRIFVDTDADIRFIRRLRRDMVERGRTLDSVVKQYLATVRPMHLEFVEPSKRYADIIVPQGGDNRVAMEMIVSRVQAVLNE 214
BLAST of EWM23929.1 vs. NCBI_GenBank
Match: gi|308225515|gb|EFO79278.1| (uridine kinase [Oscillochloris trichoides DG-6]) HSP 1 Score: 251.521 bits (641), Expect = 1.012e-78 Identity = 119/202 (58.91%), Postives = 154/202 (76.24%), Query Frame = 0 Query: 117 GPLTLGVAGGSGSGKTTFARALYEALGEEHVTYITHDSYYKDLSHLPFDERKKSNFDHPNALDTALLVEHLRALKRGHTVEVPEYDFATHNRLKRTCKAEPRPVILLEGILIFADRSLVQELAIKVFVDTESDLRLIRRIHRDVKERGRSLESIVDQYVKTVRPMHLEFVEPSKREADVIIPL-GMNQVALDMFLSRLQAEV 317 P+ +GVAGGS SGKTT ++A+ E +G + + YI HD YY DLSHLP +R + NFDHP+ALD ALL++HL AL G V VP YDFAT+ RL +T +P PVIL+EGILIF D L + + +K+FVD + DLR IRR+ RDV+ERGRSL+S+V QY+ TVRPMHLEFVEPSKR AD+IIP G N +A+DM ++R++AE+ Sbjct: 41 SPIIIGVAGGSASGKTTVSQAILERVGADRIAYIPHDLYYHDLSHLPLAQRAEFNFDHPDALDNALLIQHLDALSAGQPVAVPTYDFATYARLPQTQTIQPHPVILIEGILIFVDPLLRRRMQVKLFVDADPDLRFIRRLSRDVQERGRSLDSVVHQYLTTVRPMHLEFVEPSKRYADLIIPEGGYNPIAIDMLVARIEAEL 242 The following BLAST results are available for this feature:
BLAST of EWM23929.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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