EWM23978.1, cds6729 (CDS) Nannochloropsis gaditana

Overview
NameEWM23978.1
Unique Namecds6729
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:400946..401266 -
Alignment locationCM002469.1:400464..400753 -
Alignment locationCM002469.1:398798..400247 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23978.1
Productamino acid-polyamine-organocation family
Orig transcript idgnl|cribi|Naga_100027g54.156.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:400946..401266 -
CM002469.1supercontigCM002469.1:400464..400753 -
CM002469.1supercontigCM002469.1:398798..400247 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0003333amino acid transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
IPR029485CAT_C
Homology
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|585105264|gb|EWM23978.1| (amino acid-polyamine-organocation family [Nannochloropsis gaditana])

HSP 1 Score: 1404.04 bits (3633), Expect = 0.000e+0
Identity = 686/686 (100.00%), Postives = 686/686 (100.00%), Query Frame = 0
Query:    1 MPLQITPVSPQGAAPSPAMGNDQEEAPSLLFPSIVPQSSTSRHRLRSSCDRGSGDVVFRQEIAGIFEEVCPCEGESKRTSEQDRGGSHSRCTWHSPFLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPSGFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVSILSTCVALLSIVLLEIVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGKNGWRGSNAVSLRRHSRHSTETDPQLIAGLLNVDEDEDEDHATQKQQSLSKDTATFLNCVLNKGEK 686
            MPLQITPVSPQGAAPSPAMGNDQEEAPSLLFPSIVPQSSTSRHRLRSSCDRGSGDVVFRQEIAGIFEEVCPCEGESKRTSEQDRGGSHSRCTWHSPFLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPSGFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVSILSTCVALLSIVLLEIVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGKNGWRGSNAVSLRRHSRHSTETDPQLIAGLLNVDEDEDEDHATQKQQSLSKDTATFLNCVLNKGEK
Sbjct:    1 MPLQITPVSPQGAAPSPAMGNDQEEAPSLLFPSIVPQSSTSRHRLRSSCDRGSGDVVFRQEIAGIFEEVCPCEGESKRTSEQDRGGSHSRCTWHSPFLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPSGFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVSILSTCVALLSIVLLEIVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGKNGWRGSNAVSLRRHSRHSTETDPQLIAGLLNVDEDEDEDHATQKQQSLSKDTATFLNCVLNKGEK 686          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|223993957|ref|XP_002286662.1| (amino acid transporter, partial [Thalassiosira pseudonana CCMP1335] >gi|220977977|gb|EED96303.1| amino acid transporter, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 374.4 bits (960), Expect = 2.267e-119
Identity = 214/503 (42.54%), Postives = 313/503 (62.23%), Query Frame = 0
Query:  118 LSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPSGF--QGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRR-SRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVSILSTCVALLSIVLLEIVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNS 617
            L+L+DL+++G+GGT+GSG+FVL G IA++    AGP+  +S+  +GFA  +SG  +AEL+  I + GSSY YAYV LGE+ AF     LTLE+ +S +AVAR+WGDK+  W+    +  +   ++ QPG G         N  A  +  +   ++L G+  S+L  DV T  K+ LVIF+T+ G+ +F  +N+ P  P  F   G+ RG +  FFGYLGFD VCC+AGEA    +N+P ++M T+GIVT LY  AA+ALVGMQ+++EIST SGF EAF+A  + W A + A GE+LTLP+VV +S++ QPRLQ+A A+DGLLP + G++D+ GN   G L AG+     A F+PF  L+D +SAG+LIAF+ TN +L++ RR S  + P +    +  +N+S+F+ C    H            L   +  L  VL  I+C   +   S   F TP VP IP +G  +NY L+ QLS+ G+ L++ Y  + ++FY +Y   +S
Sbjct:    1 LTLFDLVSIGVGGTIGSGIFVLNGLIAHSY---AGPATFISWIISGFAALLSGCCYAELSGRIPSAGSSYAYAYVALGELPAFVVAGMLTLEFLLSGSAVARSWGDKVVEWLRIELSASDTVINLLQPGFG--------INPMACLVSIVTTMLVLGGVKESKLVTDVFTWIKVGLVIFMTVGGYVLFDSSNMVPVVPPEFGASGVFRGAISSFFGYLGFDAVCCVAGEAINAERNLPLSIMITLGIVTSLYVTAAIALVGMQHYNEISTESGFPEAFKANGVEWAAQLTAAGEVLTLPVVVLISVVIQPRLQYACAKDGLLPPMFGEIDETGNPRKGALFAGVLMTIFATFIPFEYLDDFVSAGILIAFSTTNCSLVIMRRESPQSDPSLLAKLLAGYNLSSFLTCITISHG-----------LHLVIGWLFAVLFGILCIVLVVKISRQYFSTPWVPAIPCLGIFVNYMLISQLSMFGICLLLTYCVLLVVFYFIYGARHS 481          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|1210523463|dbj|GAX17787.1| (hypothetical protein FisN_24Hh144 [Fistulifera solaris])

HSP 1 Score: 372.859 bits (956), Expect = 2.914e-117
Identity = 236/609 (38.75%), Postives = 353/609 (57.96%), Query Frame = 0
Query:   94 HSPFLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPSGF--QGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGM-QNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRR-SRSTLPHINRIFVLVFNISTFIACCLWQH-TGFVMPWLPVSILSTCVALLSIVLLEIVCP-------------------DQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMY-------SFHNSQGGKNGWRGSNAVSLRRHSRHSTETDPQLIAGLLNVDEDEDEDHATQKQQSLSK 671
            +SP++RKP+  + + E+++ L R LSL+DLL +G+GGTVGSG+FVL G+IA      AG     SFA +G A   SG+ FAEL+  I A GSSY YAYV  G+  A  A  CLTLEYG++ AAVAR+WGDK+   +  +   +    S W              N+ A  I  +   ++++G+  S+ A + +T+ KM+LV F+   GF +           S     GILRG    FFGYLG+DEVCC+AGEAK P +++PRAV+GT+G+VT  Y  A++AL GM +N  +IS +SGF  AFR+R++ W A + A GE++TLP+VV +SLLAQPRL + MAQDGLLPA+  + D +GNL  GTL+ G     +A F+PF  L D+ISAG+L+AF+ T+S+L+V RR S    P +    ++ +N+  F+   L  H + + +  L +++ +   A L++V + I CP                      P    + F+TP VP IP +G  +N++L+ QL + GL L+ +YLG+ +LFY ++       S+ +    K+     +A+SL     H+ + + Q +  L   DE  +   A  + Q L++
Sbjct:    6 NSPWIRKPLHAVYQYEQQQ-LHRHLSLWDLLGIGVGGTVGSGIFVLTGQIAAQY---AGTWTWCSFAVSGVAATCSGVCFAELSGRIPAAGSSYAYAYVCFGQWAAILAASCLTLEYGIAGAAVARSWGDKV---LLVIAGENAPNESSW-------------VNVPALLISALSTLLLVKGVKESKTATNFVTMMKMLLVFFMIAGGFWLSPTRTYNNSHKSSIPTAGILRGATSSFFGYLGYDEVCCVAGEAKHPVRDMPRAVLGTLGLVTITYVTASIALTGMVENPQDISPTSGFPSAFRSRHVEWAAEIAAWGEIVTLPVVVLISLLAQPRLTYGMAQDGLLPAVFAQTDVHGNLVMGTLIQGTAMTLLAAFVPFTYLNDLISAGILVAFSLTDSSLVVLRRESPPNDPGLLERCLMGYNVLCFLTAILISHESSWGIVQLALAVFTALSAALTLVYMTIQCPASPQFGGTLLQCTQSGNVSSSAPFPDSHYFQTPWVPLIPCLGMAVNWYLIAQLEVFGLLLLGLYLGVVVLFYLLFCLNGTAPSWAHPTASKSS-SSEDAISLISLGHHNFDNEKQSM--LSEQDEILNYSSAATRNQRLAR 591          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|1210518247|dbj|GAX22859.1| (hypothetical protein FisN_24Lh144 [Fistulifera solaris])

HSP 1 Score: 365.54 bits (937), Expect = 3.085e-114
Identity = 207/524 (39.50%), Postives = 314/524 (59.92%), Query Frame = 0
Query:   94 HSPFLRKPMGVITEEE--EKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQ--ANLAPFAPSGFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGM-QNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRR-SRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVSILSTCVALLSIVLLEIVCP-------------------DQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSI 592
            +SP++RKP+  + + +  E+++L R L+++DLL +G+GGTVGSG+FVL G+IA      AG     SFA +G A   SG+ FAEL+  I A GSSY YAYV  G++ A  A  CLTLEYG++ AAVAR+WGDK    V  +  + +         +      W   N+ A  I  +   ++++G+  S+ A + +T+ KM+LV F+ + GF +      N +  +     GILRG    FFGYLG+DEVCC+AGEAK P +++PRAV+GT+G+VT  Y  A++AL  M ++  +IS +SGF  AFR+R++ W A + A GE++TLP+VV +SLLAQPRL + MAQDGLLPAI  + D +GNL  GT + G     +A F+PF  L D+ISAG+L+AF+ T+++L+V RR S  + P +   +++ +N+  F+   L  H  + +    +++ +   A L++V +   CP                      P    + F+TP VP IP +G  +N++L+ QL +
Sbjct:    6 NSPWIRKPLHAVYQHDQNEQQQLHRHLTVWDLLGIGVGGTVGSGIFVLTGQIAAQY---AGTWTWCSFAVSGLAATCSGVCFAELSGRIPAAGSSYAYAYVCFGQLAAIVAAACLTLEYGIAGAAVARSWGDK----VLLVIFSGDAPNESSSSSSSSLSSSW--MNVPALLISALSTLLLVKGVKESKTATNFITMMKMLLVFFMIVGGFWLSTTRTHNNSHQSSMPTAGILRGATSSFFGYLGYDEVCCVAGEAKNPVRDMPRAVLGTLGLVTITYVTASIALTSMVEDPQDISPTSGFPSAFRSRHVEWAAEIAAWGEIVTLPVVVLISLLAQPRLTYGMAQDGLLPAIFAQTDVHGNLVMGTFIQGTAMTLLAAFVPFTYLNDLISAGILVAFSLTDASLVVLRRESPPSDPGLLERYLIGYNVLCFLTAILVSHETWWVVQTALAVFTALSAALTLVYMTFQCPASTQFGGTLLHCNQSGNVSSSAPFPDSHYFQTPWVPLIPCLGMAVNWYLIAQLEV 520          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|1173947816|gb|OQR95996.1| (Amino Acid-Polyamine-Organocation (APC) Family [Thraustotheca clavata])

HSP 1 Score: 357.836 bits (917), Expect = 5.015e-112
Identity = 219/563 (38.90%), Postives = 321/563 (57.02%), Query Frame = 0
Query:   89 SRCTWHSPFLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPS-----------GFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLP----HINRIFVL-VFNISTFIACCLWQHTGFVMP--------------WLPVSILSTCVALLSIVLLEIVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGK 621
            +R TW     RK +  + EEE  EK  R L L+DL+ +GIGGTVGSGVF  AG IA      AGP+ +LS+  AG  C +S  +F EL+  I ADGS+Y YAY  LGE+ A  AG  LTLEYG+SSA  AR W  K  AW+  +   D      W    G  +      ++YAG +  IC+ I+L GL++ +  I+V+TL+K+ +V+FI IAG   F  ANL PF P            G+ G++ G    F+GY+G+DEVCCLAGEA  P KNIPRAV+GT+     L  +A L++VGMQ +S+I+    +  AF +    W + +V  GE++T+P+ + +  LAQPR+Q AMA+DGL+PAI  K+DKNGN   G ++ GL  +A+A  + F  L + IS G+L+AFN TN +L++ R   + +      +   FVL VF IS+++A   WQ +  + P               + V+ + T VA+  ++LL +  P Q   A+ + FR P VP +P +    N+ L VQ+ I  + ++ V++ +++  Y  +      G +
Sbjct:    5 ARATW-----RKSIAQLKEEESHEKYERTLGLFDLIMIGIGGTVGSGVFATAGLIARDY---AGPAAILSWIFAGIGCILSSGAFMELSCLIPADGSTYAYAYHALGELPATIAGFLLTLEYGISSAGNARAWSSKFVAWLKLMFDIDGPA---WMRPKGTSI------DLYAGLLLTICVLIVLCGLSIGKRLINVITLTKISVVLFIIIAGITKFQPANLDPFVPPAQINDNGQSVFGWSGVMLGASASFYGYIGYDEVCCLAGEAINPRKNIPRAVLGTVLGAAALSIMATLSIVGMQKYSQINAEESYGVAFESVGYHWASPIVQTGEVVTMPVGILIGFLAQPRVQSAMAKDGLMPAIFAKLDKNGNPKHGAVLIGLFLIALATCIEFQILWNFISLGILLAFNMTNLSLLIVRFEATAIKCRQHELKLPFVLTVFTISSWLAALHWQES-MIAPSSTETSYYNYMKRAGIYVACIFTAVAVAMVILLAMNSPKQA--AANDLFRCPGVPLVPCLATFFNWLLAVQMPISTVVMMTVWILMAVCVYLGFGLRYGGGSR 547          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|1173940654|gb|OQR90013.1| (Amino Acid-Polyamine-Organocation (APC) Family [Thraustotheca clavata])

HSP 1 Score: 355.91 bits (912), Expect = 7.127e-111
Identity = 215/576 (37.33%), Postives = 333/576 (57.81%), Query Frame = 0
Query:   97 FLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNH-LHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPS--------GFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSS-GFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPV-SILSTCVALLSIVLLE-----IVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGKNGW--------RGSNAVSLRRHSRHSTETDPQLIA 648
            F  KPM VI  EE KE+L R L L DL+ +GIGGTVGSGVF   G+I ++    AGP+  LS+  AG +C +SG ++ E++S I + GS+Y Y+Y  LGE+ A  A   LTLEYG+S + VAR+W  K+ +W+   L TN             D +   + ++  A  +  + + I+L G+   ++ I+ +T +K+ +VIFI IAGF     +N  PF P         GFQG++ G  + FFGY+GFDEVCCLA EAK P + +PRAV+G +    FL   A+LAL  +  ++ +      F+  F+   + W + +V +GE+ T+P+VV +S LAQPRL +AM+ DGLLP I  +V+KNGNLF+ TL++G     +ALF+PF  L +++S G+L++FN TNSAL+++R   S+   + ++   +  IS  ++  L++  G+V    P  + L   +ALL++V +      I CP     A    +R P VP++P +  T+N++L+ QL    +G    ++G++++ Y +Y +  S  GK+GW         G N+V     S  + +  P L A
Sbjct:    8 FRTKPMEVIHAEERKEELPRELGLIDLILIGIGGTVGSGVFATTGDIISSA---AGPAAFLSWVIAGVSCIISGFAYMEMSSIIPSSGSTYAYSYHILGELPAVVAAWLLTLEYGMSGSGVARSWASKVQSWIQEDLPTNSTKV---------DWLNNEESYSFLACMVMVMSVVILLMGIKFGKIFINTVTTTKICVVIFIIIAGFSATKSSNFTPFIPPRDDENNRFGFQGVMLGASQAFFGYVGFDEVCCLAAEAKDPRRVMPRAVIGVVLGTAFLSSFASLALSAIIPYNALKAGELYFSSGFQYAGMQWASTIVHIGEVCTMPVVVLISFLAQPRLMYAMSVDGLLPKIFSRVEKNGNLFWCTLISGAFFTLVALFVPFSYLWNMVSFGILVSFNMTNSALILARTRDSSAHIVYKLTGAMVAISC-LSMFLFEK-GYVEAVGPADTYLGVSMALLAVVFMISTFIFIKCPQN--AAPMGCYRAPFVPFVPTLAITVNWYLIAQLPSRDIGFGFAWIGVAIVSYFVYGYRFS-AGKDGWATMLAEGFHGLNSVRPSMSSMLNEKNGPILSA 566          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|669167666|ref|XP_008619395.1| (hypothetical protein SDRG_15010 [Saprolegnia diclina VS20] >gi|530728966|gb|EQC27208.1| hypothetical protein SDRG_15010 [Saprolegnia diclina VS20])

HSP 1 Score: 348.977 bits (894), Expect = 2.886e-108
Identity = 212/581 (36.49%), Postives = 325/581 (55.94%), Query Frame = 0
Query:   97 FLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPS------------GFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGF--AEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVS--ILSTCVALLSIVLLEI----VCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGKNGWRGSNAVSLRRHSRHSTETDPQLIAGLLNVDEDE 657
            F  KP+ VI  EE KE+L R L L DL+ +GIGGTVGSGVF   G+I +     AG +  +S+  AGF+C +S  ++ E++S I + GS+Y Y+Y  LGE+ A  A   LTLEYG+S A VAR+W  K+  W        N T   W           ++++  A  +  + + I+L G+   ++ I+ +T +K+ +V+F+ +AGF      NL+PF P             G QG++ G  + FFGY+GFDEVCC+A EAK P K +PRAV+G I     L   A+LAL GM  + + + S+GF  +  F+ +   W   +V +GE+ T+P+VV V  LAQPR+ +AMA DGL P I GKVDK GNLF+ TL+ G+    IAL +PF  L +++S G+L+ FN TNSAL++  R+R   P I           +  +  L+Q  G+V+   P +  ++++ V L ++V +      +CP  +   S + +R+P VP++PA+  T N++L+ Q+    +GL   ++G+++L Y +Y  H    G+NGW    A  L           P L + ++   +D 
Sbjct:    8 FRTKPIEVIHAEERKEELPRELGLIDLILIGIGGTVGSGVFATTGDIISQT---AGAAAFISWMIAGFSCILSCFAYMEMSSIIPSSGSTYAYSYHILGELPAVIAAWLLTLEYGMSGAGVARSWATKVQDWAKE-DLPINSTKVDWLND--------ENYSFLACLVMILSVAILLGGIKFGKIFINTITTTKIAVVLFVIVAGFSFINTDNLSPFVPELIPATEKDPAQFGVQGVMLGASQAFFGYVGFDEVCCMAAEAKNPRKTVPRAVIGVILGTMVLSSFASLALAGMMPY-DANPSNGFYFSAGFQYQGYNWAGTIVHIGEVCTMPIVVLVGFLAQPRVLYAMAVDGLCPPIFGKVDKKGNLFWNTLITGIFFTIIALLVPFDYLWNLVSLGILVGFNMTNSALILV-RTREAAPKIAYKLTGALVAVSLASMFLFQK-GYVVATEPANGYLVASLVLLAAVVAITFAIYYLCPQNV--GSPDMYRSPLVPFVPALAITCNWYLIAQMGARDIGLCCGWVGLAVLSYFVYG-HRYSEGQNGW----AAMLHHEYTGLNSVRPSLTSQIVGEKKDS 566          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|813219188|ref|XP_012210971.1| (hypothetical protein SPRG_16285 [Saprolegnia parasitica CBS 223.65] >gi|641523487|gb|KDO18322.1| hypothetical protein SPRG_16285 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 348.591 bits (893), Expect = 4.918e-108
Identity = 209/549 (38.07%), Postives = 317/549 (57.74%), Query Frame = 0
Query:   97 FLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAI-QFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPS------------GFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGF--AEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVS--ILSTCVALLSIVLLE----IVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNSQGGKNGW 624
            F  KP+ VI  EE KE+L R L L DL+ +G+G TVGSGVF   G+I +     AG +  LS+  AGF+C ++G ++ E++S + + GS+Y Y+Y  LGE+ A  AG  LTLEYG+ SA VAR+W DK+  WV      +  T++ W   +            + GA+   +C+ I+L G+   +  I+V+T  K+ +V+FI I GF      N  PF P             G QG++ G  + FFGY GFDEVCC+A EAK P K +PRAV+G I    FL   A+LAL GM  + + +  +GF  +  F+ +   W   +V +GE+ T+P+VV V  LAQPR+ +AMA DGL P I GKVDK GNLF+ TL+ G+    IAL +PF  L +++S G+L+ FN TNSAL++  R+R + P I           +  +  L+Q  G+V+   P +  ++++ V L ++V +      +CP  +   + + +R+P VP++PA+  T N++L+ Q+    +GL   ++G+++L Y +Y  H    G+NGW
Sbjct:    8 FRTKPIAVIDAEERKEELPRELGLVDLILIGVGSTVGSGVFATTGDIISQT---AGAAAFLSWLIAGFSCILNGFAYMEMSSLVPSSGSTYAYSYYGLGELPAVVAGWLLTLEYGICSAGVARSWADKVHEWVKE-GLPEGSTSANWLNDSHAS---------FLGALCMAVCVAIVLVGIKFGKHFINVVTTIKVSVVLFIIIVGFIATQPENFTPFVPPVVPATADSAAQFGVQGVMLGASQAFFGYTGFDEVCCMAAEAKNPRKTVPRAVIGVILGTMFLSSFASLALSGMMPY-DANPPNGFYFSAGFQYQGYNWAGTIVHIGEVCTMPIVVLVGFLAQPRVLYAMAVDGLCPPIFGKVDKKGNLFWNTLITGVFFTIIALLVPFDYLWNLVSLGILVGFNMTNSALILV-RTRESAPTIAYKLTGALVAVSLASMFLFQK-GYVIATEPATGYLIASMVLLAAVVAITFGIYFLCPQNV--GAPDMYRSPLVPFVPALAITCNWYLIAQMGARDIGLCCGWVGLAILSYFVYG-HRYSEGQNGW 537          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|695419883|ref|XP_009527780.1| (hypothetical protein PHYSODRAFT_502334 [Phytophthora sojae] >gi|348678905|gb|EGZ18722.1| hypothetical protein PHYSODRAFT_502334 [Phytophthora sojae])

HSP 1 Score: 346.28 bits (887), Expect = 1.637e-107
Identity = 219/554 (39.53%), Postives = 311/554 (56.14%), Query Frame = 0
Query:   97 FLRKPMGVITEE--------EEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPS--------------GFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRS-----------TLPHINRIFVLVFNISTFIACCLWQHTGFVMPWLPVSILSTCVALLSIVLLEIVCPDQIPLASENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMYSFHNS 617
            F RKP+ + T          ++  ++ R L L+DL+ +GIGGTVGSGVF  AG IA++    AGP+  LS+  AG  C +SGLSF ELA  I + GS+Y YAY  LGE+ A  AG  LTLEYGVSSA  AR+W DKL  W   + +        W       V      ++YAG +      I+L G+   +L ++V+T++K+ +V FI + G   F    ++PF P               G+ G+L G    F+GY+G+DEVCCLAGEAK PA+NIPRAV+GTI     L  +A  ALVGMQ +++I     +  AF +  + W A+ VA GE+LT+P+  F+  +AQPR+Q+AMA+DGLLPA   +VD  GNLF GTL+ G+   A+A+F+PF  L + IS G+L+AFN TNS+L+  R S S           T+       +  + IS+F+A   WQ    V+  +P+S      A   I L +       P  S   FR P VP+ P V    N+FL  Q+    + L++++L ++++ Y  YS H+S
Sbjct:    8 FWRKPLHLETSSSHSLQHGGDDAPEMVRTLGLFDLVMIGIGGTVGSGVFATAGLIASSY---AGPAATLSWLLAGAGCLLSGLSFMELACLIPSAGSTYAYAYHALGELPALVAGFLLTLEYGVSSAGGARSWSDKLTQW---MESQLGVQGPEWMKPKDSVV------DLYAGLLMAGSTAIVLCGMQAGKLVVNVVTMTKITVVAFIIVVGLANFDAGRISPFVPDQSVVEVNGKETVAFGWPGVLLGASASFYGYIGYDEVCCLAGEAKDPARNIPRAVVGTILGAATLSILATFALVGMQKYTDIDAEESYGNAFTSIGMDWAASFVASGEVLTMPITSFIGFMAQPRVQYAMAKDGLLPATFAEVDAKGNLFRGTLLCGIGVTALAVFVPFHVLWNFISLGILVAFNLTNSSLLFVRASNSTNVEEGEAEDATVKRSQGAMIAGYLISSFLAAFHWQKE--VVASVPLS------ATTDISLFDSYMRTVGPFTS--TFRAPFVPFAPCVAIFFNWFLFAQMDGMSVLLILLWLLLAVVVYFGYSRHHS 539          
BLAST of EWM23978.1 vs. NCBI_GenBank
Match: gi|669158782|ref|XP_008614953.1| (hypothetical protein SDRG_10726 [Saprolegnia diclina VS20] >gi|530733312|gb|EQC31554.1| hypothetical protein SDRG_10726 [Saprolegnia diclina VS20])

HSP 1 Score: 345.895 bits (886), Expect = 3.964e-107
Identity = 211/566 (37.28%), Postives = 320/566 (56.54%), Query Frame = 0
Query:   80 SEQDRGGSHSRCTWHSPFLRKPMGVITEEEEKEKLARRLSLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGFACFVSGLSFAELASGIHADGSSYVYAYVHLGEIFAFWAGCCLTLEYGVSSAAVARNWGDKLGAWVNHLHTNDNGTTSIWQPGTGDRVGMWKDFNIYAGAIQFICMTIMLRGLNVSRLAIDVMTLSKMVLVIFITIAGFCVFAQANLAPFAPS-----------GFQGILRGGMRCFFGYLGFDEVCCLAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSRRSRSTLP----HINRIFVL-VFNISTFIACCLWQHT--------GFVMPW-----LPVSILSTCVALLSIVLLEIVCPDQIPLAS----ENRFRTPCVPWIPAVGATMNYFLLVQLSIEGLGLVMVYLGISLLFYAMY 612
             +Q++ G  S   W     RK +  + +EE  E   R L L+DL+ +GIGGTVGSGVF  AG IA      AGP+ VLS+  AG  C +S  +F EL+  I ADGS+Y Y Y  LGE+ A  AG  LTLEYG+SSA  AR W  K   W+  L   D+    +W    G  +      ++YAG +  +C+ I+L G+++ +  I+V+TL+K+ +V+FI +AG   F  AN+ PF P            G+ G++ G    F+GY+G+DEVCCLAGEA  P KNIPRAV+GT+     L  +A L++VGMQ+++ I     F EAF++    W + +V  GE+LT+P+ + +  LAQPR+Q AMA+DGL+PA+  ++D +GN   G ++ GL  + +   + F  L + IS G+L+AFN TN +L+V R   + +      +   FVL VF++++++A   WQ          G+V  +     L V+ L T VA   +VLL    P   P  +    E  FR P VP +P V    N+ L+ Q+ +  + ++++++ +++  Y +Y
Sbjct:    2 KQQEQPGRES--LWARATHRKSLAQLRDEESHETNERSLQLFDLIMIGIGGTVGSGVFATAGLIARNY---AGPAAVLSWVFAGIGCILSSGAFMELSCLIPADGSTYAYTYHALGELPATIAGFLLTLEYGISSAGNARAWSGKFVVWLKLLFNVDS---PVWMRPAGTSI------DLYAGLLLTVCVLIVLGGMSLGKRLINVITLTKITVVLFIIVAGLTKFEYANVTPFVPPSTTNESGQTVFGWPGVMLGASASFYGYIGYDEVCCLAGEAVNPRKNIPRAVLGTVLGAATLSILATLSIVGMQHYASIDVDESFGEAFKSVGYHWASPIVETGEVLTMPVGILIGFLAQPRVQCAMAKDGLMPAVFKRLDVHGNPRMGAILCGLFLILLTTLVEFHVLWNFISLGILLAFNLTNLSLLVVRYEATQIECASLQLKLPFVLSVFSLASWLAAWHWQEAIIAPSRTEGYVYEYMTAAGLVVASLFTGVAASMVVLLACTKPVTSPHKATDEVEALFRCPGVPLVPCVAMFFNWLLVAQMPVLTVVMMVLWVLLAVCVYLVY 553          
The following BLAST results are available for this feature:
BLAST of EWM23978.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105264|gb|EWM23978.1|0.000e+0100.00amino acid-polyamine-organocation family [Nannochl... [more]
gi|223993957|ref|XP_002286662.1|2.267e-11942.54amino acid transporter, partial [Thalassiosira pse... [more]
gi|1210523463|dbj|GAX17787.1|2.914e-11738.75hypothetical protein FisN_24Hh144 [Fistulifera sol... [more]
gi|1210518247|dbj|GAX22859.1|3.085e-11439.50hypothetical protein FisN_24Lh144 [Fistulifera sol... [more]
gi|1173947816|gb|OQR95996.1|5.015e-11238.90Amino Acid-Polyamine-Organocation (APC) Family [Th... [more]
gi|1173940654|gb|OQR90013.1|7.127e-11137.33Amino Acid-Polyamine-Organocation (APC) Family [Th... [more]
gi|669167666|ref|XP_008619395.1|2.886e-10836.49hypothetical protein SDRG_15010 [Saprolegnia dicli... [more]
gi|813219188|ref|XP_012210971.1|4.918e-10838.07hypothetical protein SPRG_16285 [Saprolegnia paras... [more]
gi|695419883|ref|XP_009527780.1|1.637e-10739.53hypothetical protein PHYSODRAFT_502334 [Phytophtho... [more]
gi|669158782|ref|XP_008614953.1|3.964e-10737.28hypothetical protein SDRG_10726 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6745rna6745Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications