EWM30002.1, cds672 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|585112613|gb|EWM30002.1| (Protein of unknown function DUF3493 [Nannochloropsis gaditana]) HSP 1 Score: 1014.22 bits (2621), Expect = 0.000e+0 Identity = 494/494 (100.00%), Postives = 494/494 (100.00%), Query Frame = 0 Query: 1 MLRKGGFMGSTPIGSPKCLDPHAPQPAAWWIILVGLEAAHAMNQCHDHHTEYGGSIDRWCLPPLSFILTYLLYPRSVVLRFLIGSVKMKVSSMHRFCRRLPALLLLAVSCSAFLFPIPSRIPTSSAQVLHATKKSKQTFSELGNTVPPPPPPTSTPPPFATSTDETSFEEEEMEAEEENAAVTGLSPTMYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLNETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYVPPIGAGGGKGGKKKRKKG 494 MLRKGGFMGSTPIGSPKCLDPHAPQPAAWWIILVGLEAAHAMNQCHDHHTEYGGSIDRWCLPPLSFILTYLLYPRSVVLRFLIGSVKMKVSSMHRFCRRLPALLLLAVSCSAFLFPIPSRIPTSSAQVLHATKKSKQTFSELGNTVPPPPPPTSTPPPFATSTDETSFEEEEMEAEEENAAVTGLSPTMYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLNETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYVPPIGAGGGKGGKKKRKKG Sbjct: 1 MLRKGGFMGSTPIGSPKCLDPHAPQPAAWWIILVGLEAAHAMNQCHDHHTEYGGSIDRWCLPPLSFILTYLLYPRSVVLRFLIGSVKMKVSSMHRFCRRLPALLLLAVSCSAFLFPIPSRIPTSSAQVLHATKKSKQTFSELGNTVPPPPPPTSTPPPFATSTDETSFEEEEMEAEEENAAVTGLSPTMYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLNETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYVPPIGAGGGKGGKKKRKKG 494
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|1210519795|dbj|GAX21347.1| (hypothetical protein FisN_6Lh087 [Fistulifera solaris]) HSP 1 Score: 152.525 bits (384), Expect = 1.902e-38 Identity = 95/275 (34.55%), Postives = 156/275 (56.73%), Query Frame = 0 Query: 192 KLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLK---QVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLN-ETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAEL 462 KL SE+ P+R++RLF+YG +G GA +GG+ +T L+ +L + ++ LN+G+DFG A A A++F+ ++ ++++K Q L K+ + + RE+ L L + ++ N + R ASV++L+ QH+I++A PK DAL GA + K FA +NV++ P+ + G KGFG S + + + YVA+P S W Y+ E+ DAV+Q EKAR GI +V+ +G ++RRGVG+ W+++V EL Sbjct: 63 KLLSESIAPWRTIRLFLYGSLGSGAFVGGFIQLTGLLAALSKGQTDIDMNTEYLNLGIDFG--AVALFAFLFKWDIEKQGELSEKVEQKLELKKLQKEVSKGMREREQLLGTLQLQVQISANGDVRQASVRELQAGARQHVILVAGPKKACKDALVGANLLKMDFAMSNVLVVPYETDVDVAELQSRPDG-KGFGDTS-------LPIYERQPYVARPTGSG-WDEYVAAEMADAVQQNGEKAREEGIAVVVASNGKVVRRGVGKVPWRQMVEEL 326
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|1210515163|dbj|GAX25875.1| (hypothetical protein FisN_6Hh087 [Fistulifera solaris]) HSP 1 Score: 151.754 bits (382), Expect = 4.517e-38 Identity = 94/275 (34.18%), Postives = 156/275 (56.73%), Query Frame = 0 Query: 192 KLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFE---NRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLN-ETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAEL 462 KL SE+ P+R++RLF+YG +G GA++GG+ +T L+ +L + ++ LN+G+DFG A A A++F+ ++ ++++K Q L K+ + + RE+ L L + ++ N + R ASV++L+ QH+I++A PK DAL GA + K FA +NV++ P+ + G GFGG S + + + YVA+P W Y+ E+ DAV+Q EKAR GI +V+ +G ++RRGVG+ W+++V EL Sbjct: 63 KLLSESIAPWRTIRLFLYGSLGSGAAVGGFIQLTGLLAALSKGQTDIDMNTEYLNLGIDFG--AVALFAFLFKWDIDKQGELSEKVEQKLELKKLQKEVSKGMREREQLLGTLQLQVQISANGDVRQASVRELQAGARQHVILVAGPKKACKDALVGANLLKMDFAMSNVLVVPYETDVDVAELQSRPDG-SGFGGDSTL------PIYERQPYVARPTGDG-WDEYVAAEMADAVQQNGEKAREEGIAVVVASNGKVVRRGVGKVPWRQMVEEL 327
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|219117770|ref|XP_002179674.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408727|gb|EEC48660.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.813 bits (351), Expect = 1.155e-33 Identity = 93/291 (31.96%), Postives = 152/291 (52.23%), Query Frame = 0 Query: 189 MYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFE-NRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLN-ETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYVP 477 + KL SE+ P+R+LRLF+Y +G GA +GG ++ ++ + ++ +N+ +DFG A A F+ ++ K + + + + K+ + K RE+ L+ L V +V +T+ ASV+ L+ QH+IV+A PK DAL GA + K FA +NV++ PF D T + + + GG ++ M +++ YVA+ A W YI E+ DAV+Q EK + GI IV+ G IIRRGVG+ W+++V +L + E G +P Sbjct: 64 LRTKLVSESIAPWRTLRLFLYTALGAGAFIGGLVNLSGTAAAISGARSDVDMNTEYINLAIDFGAVAVFAFLTKFDLDKQKDLNENVEKKIELKKQQKQLVKGMKEREKQLATLNVEIQVSATGDTKQASVRQLQAGARQHMIVVAGPKKATRDALIGANLLKMDFAMSNVLVVPF----ETDVTEADRLS-RPEGGFGERP------MYETQPYVAQ-AVGEGWQEYIKSEMSDAVKQNGEKVKEEGIAIVVASTGKIIRRGVGKVPWRQMVEQLQASTKEKE-GSGLLP 341
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|298706793|emb|CBJ29716.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.658 bits (348), Expect = 3.085e-33 Identity = 98/295 (33.22%), Postives = 153/295 (51.86%), Query Frame = 0 Query: 174 EAEEENAAVTGLSPTM-YDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENR----LKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTF-----KVGLNETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKT-LFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQG--NEKARNTGIGIVMRKDGSIIRRGVGQPDW 455 +A+EE+ + +P DKL++E TPFR+ R+FIYG G+ A +GG T++TQL +L +P AL L + ++N+ VDFGV AAAA + FE L+QV + + + ++T D+ R + L L V L + A V L ++ Q VLA K + D++ A + K +F N+++ P ++ ND G + + KGFG T + + + YVA P D W ++EE E A RQG + + GI +++ K G ++RRGVG P W Sbjct: 34 QADEEDDEIA--TPAFNIDKLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVANDGKGAKGLA-KGFG------TSLS---YEEQGYVAAPVDEDGWRALMEEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMW 316
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|676387853|ref|XP_009037205.1| (hypothetical protein AURANDRAFT_71677 [Aureococcus anophagefferens] >gi|323451949|gb|EGB07824.1| hypothetical protein AURANDRAFT_71677 [Aureococcus anophagefferens]) HSP 1 Score: 139.043 bits (349), Expect = 2.144e-31 Identity = 91/292 (31.16%), Postives = 149/292 (51.03%), Query Frame = 0 Query: 185 LSPTMYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLNETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPA--DSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDA 474 +S KL EA TP+R++R F YG G+ A++GG TA+ Q S+ +PDALPLSQ +NV VD GV AA ++ N + ++ A E L D+ +AR A++ L V +G + RSA+V+ L+ GQ ++VL P+ + DAL A + + FA+ ++ P + G + A +D +VA P D+A+W +Y+++EL A QG + + G+ + +R+DG++ R VG+P W +++A + + G A Sbjct: 46 ISAAQKSKLLQEAQTPWRTVRTFFYGAFGLSATVGGITALAQTAASVAGQPDALPLSQCGVNVLVDAGVVAAC----LYGNSVDNGEAADITV--ADETAPLADDVAEARRDAVAKLRVDVGLG-DLKRSAAVRTLQRDAGQAVVVLGGPRAAVDDALLDALIQRNAFARAECVVVPVRLDDG-----------------AGAAPATNALTVDEAPFVALPNADDAAAWRSYLEDELATAADQGADT--SAGVVVALRRDGTVASRNVGKPPWPQLIAAIDAKAEVAANGHA 311
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|223998698|ref|XP_002289022.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976130|gb|EED94458.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 134.035 bits (336), Expect = 1.418e-29 Identity = 94/303 (31.02%), Postives = 157/303 (51.82%), Query Frame = 0 Query: 177 EENAAVTGLSPTMYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFE-NRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLN-ETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYVP 477 +E TGL P + L +E PFR LRLF Y GA +GG + + +L + L+ LN+G+DFG A F+ ++ +++ + Q + K+ + + RE+ + L + +V + ETR ASV +++K QH+I++A P + DAL GA++ K FA N+++ P+ + G D+ + A G GG D+ + + + YVA+P A W T++D E+ AV Q E + GI +V+ DG +++RG+G+ W+++V EL A T E + VP Sbjct: 954 QEKKNKTGLEPNVSKNLLTETIAPFRGLRLFFYAAFASGAFVGGLITASGVAAALSGVRTDVDLNAEYLNLGIDFGAVLLFAVLAKFDLDKGEELKAQVEQKIENKKKQKKITKAMREREKYFAELELDVRVSDDGETRRASVGTMQDKAKQHVILVAGPGRVIRDALRGAQLNKVNFAMTNILVVPY--ETGLDE-ADRASKPSG-GGFGDRPS------YERQPYVAEPV-GAGWGTFVDAEISTAVEQAGETVKEQGIALVIANDGRVLKRGLGKVPWRQIVDELEEAV-TGEKKETSVP 1244
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|397642957|gb|EJK75565.1| (hypothetical protein THAOC_02707 [Thalassiosira oceanica]) HSP 1 Score: 112.464 bits (280), Expect = 1.043e-23 Identity = 95/340 (27.94%), Postives = 160/340 (47.06%), Query Frame = 0 Query: 151 PPTSTPPPFATSTDETSFEEEEMEAEEENAAVTGLSPTMYDKLRSEATTPFRSLRLFIYGGIGVGASLGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDK--------EMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLN-ETRSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGF----GGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAELTGAKGTSEFGDAYVP 477 P +T P T E + E+++ G + +KL E P+R LRLF+YG GA + G + ++ ++ D + L+ +N+ ++FG +F K DK E + R K+ +T M++ RER L L + +V + E R A V +++K QH+I++A P + DAL GA++ K FA N+++ P+ +TG + + VK GG D +++AYVA+P W +I E++ A Q G+ +V+ +G ++RRGVG+ W+++V EL A T E ++ VP Sbjct: 37 PTAATASPRRRPTTELNQEDKKRSG--------GFDKGVSNKLLEETVAPWRGLRLFLYGAAASGAFVSGMFTGSGVIAAMGGVRDDVDLNAEYVNLAINFG------AVLLFAVLAKLDLDKGAELSASIEEKVERKKKIKNMTKSMRE-RERQLRDLSLNVRVTEDGELREAPVGVMQDKAKQHIILVAGPGRAIRDALRGAQLNKVNFAMTNILVVPY-------ETGVDEV-VKASKPDGGGFGDSRPSY-----ETQAYVAEPVGEG-WGEFIQAEMDTAAEQAGGTVLEQGVALVIANNGKVLRRGVGKVPWRQMVDELEEAV-TGEKKESAVP 346
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|873228657|emb|CEM15622.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 111.309 bits (277), Expect = 8.796e-23 Identity = 82/290 (28.28%), Postives = 136/290 (46.90%), Query Frame = 0 Query: 185 LSPTMYDKLRSEATTPFRSLRLFIY-----GGIGVGAS-----LGGYTAVTQLVQSLQHRPDALPLSQSILNVGVDFGVAAAAAGAWVFENRLKQVTDKEMQALRAKEPFRLTFDMKKARERALSGLPVTFKVGLNET-----RSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGNEKARNTGIGIVMRKDGSIIRRGVGQPDWKEVV 459 +S T L+ EA+ PFR+LR IY GG+ GA+ LGG + +Q N VD GV AA + FE + + ++ L ++ + + R + ++ LP+ VG + + +V ++++ GQH++++ AP ++ DAL A++ +LF +V+I P ++ G G G S + G Y+A+P D SW + +E++DA RQG KA+ GI +V+R DG ++ R VG PDW V+ Sbjct: 179 MSKTTLTTLKEEASYPFRNLRYAIYIVGIIGGVLAGAANTLGLLGGEMDINTALQ----------------NYAVDGGVLVGAALLFRFERQRQLDATARLELLETRKEGAIAPEELARRAKVIASLPLAVSVGTKASGAEAFKETTVGEIQDDAGQHVVIVGAPTAKVTDALVSAQIKGSLFRNKDVLIVPVEMRRGKGGKEGGKGGGFGEKRPSWRKQG----------YIAEPVDEESWRAALRKEIQDAERQGAGKAKEEGIVLVVRNDGKVVARRVGTPDWTLVL 442
BLAST of EWM30002.1 vs. NCBI_GenBank
Match: gi|1072233765|gb|OEU18495.1| (hypothetical protein FRACYDRAFT_268325 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 89.7373 bits (221), Expect = 3.508e-17 Identity = 57/173 (32.95%), Postives = 91/173 (52.60%), Query Frame = 0 Query: 292 KARERALSGLPVTFKVGLNET-RSASVKDLREKGGQHLIVLAAPKGELADALFGARVGKTLFAKNNVMIAPFVIQGGNDKTGEEAIGVKGFGGMSDKATGMKEAMIDSEAYVAKPADSASWATYIDEELEDAVRQGN-EKARNTGIGIVMRKDGSIIRRGVGQPDWKEVVAEL 462 K RE L L + +G N+ R+A + DL+ QH+I++A P+ + DAL GA + K FA +N+++ P+ D + + GFG + +++ YVA A W YI +E++ A++Q E A GI IV+ +G IIRRGVG W+++V +L Sbjct: 2 KERESILKSLELDITIGNNDQKRTAKISDLQGGAQQHIIIVAGPRPAIRDALIGANILKMDFAMSNILLVPY----DTDTRNKSSKSSSGFG---------ERPSYETQPYVAD-ASGEDWDEYITKEIDFAMQQSKGENADKVGIAIVVANNGEIIRRGVGTVPWRQMVMQL 160 The following BLAST results are available for this feature:
BLAST of EWM30002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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