EWM30000.1, cds669 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|585112611|gb|EWM30000.1| (transcription elongation factor spt6 [Nannochloropsis gaditana]) HSP 1 Score: 1211.44 bits (3133), Expect = 0.000e+0 Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0 Query: 1 MFTSFSPLAVPFVHFLKVNLLDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFRDAVSLSSSSTSTAMPPTDSSTLAPAPTSRPPSGCPPMRIIIPLVPKQACPLPFTLFLEARLCPRSNSNSNSNYSRQHHRPGVLVGSENPHAGHCVLRKEKRRNEEELPVDQDPI 586 MFTSFSPLAVPFVHFLKVNLLDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFRDAVSLSSSSTSTAMPPTDSSTLAPAPTSRPPSGCPPMRIIIPLVPKQACPLPFTLFLEARLCPRSNSNSNSNYSRQHHRPGVLVGSENPHAGHCVLRKEKRRNEEELPVDQDPI Sbjct: 1 MFTSFSPLAVPFVHFLKVNLLDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFRDAVSLSSSSTSTAMPPTDSSTLAPAPTSRPPSGCPPMRIIIPLVPKQACPLPFTLFLEARLCPRSNSNSNSNYSRQHHRPGVLVGSENPHAGHCVLRKEKRRNEEELPVDQDPI 586
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|553180884|ref|XP_005853476.1| (transcription elongation factor spt6 [Nannochloropsis gaditana CCMP526] >gi|422295585|gb|EKU22884.1| transcription elongation factor spt6 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 818.92 bits (2114), Expect = 0.000e+0 Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0 Query: 17 KVNLLDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQ 413 KVNLLDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQ Sbjct: 829 KVNLLDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPSGSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQ 1225
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|219124143|ref|XP_002182370.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406331|gb|EEC46271.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 212.231 bits (539), Expect = 5.659e-55 Identity = 156/520 (30.00%), Postives = 267/520 (51.35%), Query Frame = 0 Query: 21 LDNTRIHPECYLTHEWVGKVIRDAMEQADPTM---GINELVRLVMQDSF----KILLAT---------LCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTAR--DWPRPPSLPPLDRHFDEARALKEYEERRRKIE---EKVRLA--------KEG---KLRLSRRQRKVDDE-RWRTVNHLEAEKVLKQQGK--VGEWLFRPS--GSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFRDAVSLSSSSTSTAMPPTDSSTLAPAPTSRPP 503 LD+TR+HP+ YL H W K+ DA+E+ D + +R VM++S ++ +AT L + P + D++ L+LE FAN +E+T G+ + ++ IK E R P+ DPR P +S D+LF L++GE+D +LR G VTG+V + + +RV+L + + ++ + + E +V V V+T ++K ++V +S ED W RP SLPP+D HFD A K E+ ++ E E ++L+ +EG + R+ R R+ +R E + LK+ G VGE L RPS S ++++ W+ E + + V EE+KE ++G L V+ + Y +D+++ +YI PMND ++ + +HRKF + +++++A+L A KK++P + Y G + + P+ ++P G ++ +NTF S D + + FK++ R AV S + P T + ++AP S+PP Sbjct: 1342 LDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSHHEVERLFMATKSEWEMNYGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLGRWHSHLEMIKWEFRLPYVDPRKPMEPVSSDRLFSLITGESDQSLRPGKEVTGKVVRNGDFGSRVKL-EGEIPAFIPLRNLSDEHVET-AEDIVAAGQIVTAVITMVKKEHMTVDMSLKMEDFRKNPSSWERPLSLPPIDVHFDLVAAAKIEEDNNKRREAHLEALQLSLGTKGADGEEGTGQRKRIGRVARRACTHPAFRNAKTDEITRELKEGGAAMVGEALIRPSSKNSDALAIHWVVKEGSIKVVEVIEEDKETEASIGNTLKVKSQSYGSIDELLGRYIAPMNDFVEELVNHRKFLDIPEDELDAKLVAEKKENPKSIPYSACWMENHAGYASLRFVSSTNARSHPIGISPTGYTWGSNTFPSLDRLINAFKKNPRGAV---KSKPPISTPATTAPSVAP---SKPP 1853
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|1210532192|dbj|GAX09258.1| (transcription elongation factor SPT6 [Fistulifera solaris]) HSP 1 Score: 210.69 bits (535), Expect = 1.676e-54 Identity = 160/528 (30.30%), Postives = 258/528 (48.86%), Query Frame = 0 Query: 21 LDNTRIHPECYLTHEWVGKVIRDAMEQADPTM---GINELVRLVMQDSF----KILLATLCPPSEQGRPIDRLLV----AEIP-----DELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGY-LHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTAR--DWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKV--------RLAKE-GKLRLSRRQ---RKVDDERWRTVNHLEAEKVLKQQGK--VGEWLFRPSG--SGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFRDAVSLSSSSTSTAMPPTDSSTLAPAPTSRPPS----GCPPM 509 LD TR+HP+ Y+ + W K+ DA+E+ DP + VR VM DS ++ AT P + +P D++ L+L+ FAN +E G+G+ + ++ IK E R P DPR P +S DK+F L++GETD +LR G +TG+V + + +RV+L+ + L +++ DF V V V VVTE++K ++V +S ED + W RP SL LD FD A K ++ +K + V R + G LR +R+ R +R + E E+ L G VGE L RPS S S+++ W+ E ++ I V EE KE ++G L ++ + +D+++ ++I PMND ++ + SHRKF +A+E+V+A+L+ KK +P + Y PG + + + ++P+G S+ + T+ + D + D FK++ R +V S PP AP SR P+ G P+ Sbjct: 1310 LDGTRLHPDVYIRNNWASKIAFDALEREDPKTKESAAIKAVRDVMDDSHLEVDRLFKATKAEWERHYGPTFNIKEWDPRVNVPHDQWRDKVEELDLDTFANMIEQNGHGRWHTHLEMIKWEFRLPAADPRKPLEPLSGDKVFHLITGETDQSLRPGKEITGKVIRNGDFGSRVKLEGDIPAFIPLRNLSDEHVESADDF---VSVGQIVTAVVTEVKKDHMTVDMSLKLEDFRKKPSSWERPTSLFSLDECFDVQAANKIEDDNAKKRDAHVDALLVSLGRTGDDVGGLRQGKRRVVRRACTHPAFRNAKNKEVERELLDGGSQMVGEALIRPSNKSSDSLAIHWVVKEGMIKVIEVLEENKETDASIGNILKIKDDAFGSIDELLGRFIAPMNDYVEELVSHRKFLDLAEEEVDAKLKDEKKANPKSIPYALCWLEMHPGYASLRFVASSTPRNHTIGISPKGFSWNSITYANLDVLIDSFKKNPRGSVPKPKELPSVRKPP------APPVPSRLPTENRWGAKPL 1828
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|224007547|ref|XP_002292733.1| (SUPT6H,-like protein to suppressor of ty 6 [Thalassiosira pseudonana CCMP1335] >gi|220971595|gb|EED89929.1| SUPT6H,-like protein to suppressor of ty 6 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 204.527 bits (519), Expect = 2.075e-52 Identity = 139/461 (30.15%), Postives = 224/461 (48.59%), Query Frame = 0 Query: 21 LDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINE-----LVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTAR--DWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGK--VGEWLFRPSGSG--SISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEH 470 LD+TR HP+ YL +W K+ DA+E D + +R VMQ+S +E+ L+L+ FA +E GNGK + +K E R PF DPR P + +KLF+L++GETDATL G VTG+V K + ++V+L + V G++ N+ D V V ++TE++ + ++ ED + +W RP SLPPLD FD AL ++ + EE R K + R +R +H E +K L++ G VGE L RPS S+++ W+ + I V EE+K+ ++G +L ++ VY+ +D+++ +YI PMND ++ V HRKF +++V+A++ K+ P VFY PG + I+ + +TP G ++ + F S D + + FK++ Sbjct: 811 LDDTRCHPDVYLRQKWAVKIAVDALELGDSASNDTDDYAISALRDVMQNS--------------------------REEVEELDLDTFAEMIEQNGNGKWLSHLTMVKWEFRLPFEDPRKPMEPPTHEKLFKLLTGETDATLCPGKEVTGKVVKNGDFGSQVKL-EGDVPGFIP---LRNLADDH-------VGQIVNAIITEVKMDHMCCDLTLKLEDFKKKSSEWGRPASLPPLDNSFDREAALSIDADKAKAREEPPRSGKVTR-------RACAHPAFRNASHSEVDKELREAGDAMVGEALIRPSNKSVDSLAVHWMVRPGCIKVIEVLEEDKDTDASIGNRLIIKREVYESIDELLGRYIAPMNDRVEEVIHHRKFMDKLEDEVDAKIVEMKQAQPKGVFYHVCWSESYPGYVSLRFIMNRTPRNHTIGITPDGFAWGSMNFNSMDRLLNAFKKN 1227
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|1072228791|gb|OEU13526.1| (hypothetical protein FRACYDRAFT_209780 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 203.756 bits (517), Expect = 4.012e-52 Identity = 143/480 (29.79%), Postives = 239/480 (49.79%), Query Frame = 0 Query: 21 LDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDM--DFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTAR--DWPRPPSLPPLDRHFD-------EARALKEYEERRRKIEEKV--RLAKEGKLRLSRRQRKVDDE-RWRTVNHLEAEKVLKQQG--KVGEWLFRPS--GSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFRDAVSLSSSST 482 LDNTR+HP+ Y + W K+ DA+E+A+ E Q K L D++ L+L+ FAN +E GNGK + M+ IK E R F DPR + DKLF L++GETD +LR G +TG++ + ++V+L+ + R N+ D E +V V + V +VTE++K ++V +S ED + W RP SL PLD +FD E + KE E R ++ K+ ++ ++GK R+ R R+ +R E ++ LK G VGE L RPS + S+++ W+ + + I V EEEK+ ++G L ++G Y +D++ +YI PMNDL++ + +HRKF +++ ++ +LRA K + + + Y PG + I+ P+ ++P G + F+S D + + FK++ R + ++ ++ Sbjct: 884 LDNTRLHPDVYQKNNWASKIATDALERAEEGTKNKE------QAGIKALRDVW------------------HDKVEELDLDTFANMIEENGNGKWHSHMEMIKWEFRLQFADPRNQMETLGGDKLFRLITGETDQSLRPGKEITGKILVNTDFGSKVKLEGDIPAFISLR----NLADDHVESAEDVVAVGSIVTALVTEVKKDHMTVDMSLRMEDFRKQPSSWERPESLTPLDFYFDTNASKAIEDKKSKEREARLEAMQLKLSSKIGEDGK-RMGRVTRRACAHPAFRNAKGNEVDEELKAGGLAMVGEALIRPSSKSADSLAIHWMYKDGSIKIIEVTEEEKDTDASIGNILKIKGESYGSIDELYGRYIAPMNDLVEELVNHRKFVDQSEDDLDEKLRAEKATNKNSIPYNVCWMEMHPGYSSLRFILSSTPRQHPIGISPNGFVWGVKNFKSLDLLLNEFKKNPRGTSTNAAKAS 1334
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|397575829|gb|EJK49909.1| (hypothetical protein THAOC_31164, partial [Thalassiosira oceanica]) HSP 1 Score: 198.364 bits (503), Expect = 1.813e-50 Identity = 150/495 (30.30%), Postives = 243/495 (49.09%), Query Frame = 0 Query: 21 LDNTRIHPECYLTHEWVGKVIRDAMEQADPTMGINE----LVRLVMQDS---FKILLATLCPPSEQGRPIDRLLVAE-----IP-----DELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGYLHRSRYPNMQRDM--DFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTAR--DWPRPPSLPPLDRHFDEARAL-------KEYEERRRKIEEKV---RL-----AKEGKLRLSRRQRKVDDE-----RWRTVNHLEAEKVLKQQGK--VGEWLFRPSGSG--SISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEH 470 LD++R HP+ Y + W K+ DA+E D +E +R +M DS K L E+ AE +P D++ L++E FA+ +E G+GK Q+ K ELR P+ DPR P +LF+L++GETDA+L G VTG+V K ++ ++++L + V G++ N+ D + +V V T V ++T+++ + V +S ED + +W RP SL PLD +FD A AL KE +ER + KV R+ A EG + RR KV +R H ++ LK G +GE L RPS S+++ W+ + I V EE+K+ ++G +L V+ VY+ +D+++ ++I PMND ++ V HRKF +++V+ L+ K+ +P VFY PG + I+ + +TP G + TF + D + + FK++ Sbjct: 610 LDDSRCHPDVYQRNRWAVKIAVDALELGDSVAQDDENAITAIRDIMDDSQLEVKRLYDATKSEWERAYGSGTFNTAEWDPKLLPPESWRDKIEELDIEAFADMIEQNGSGKWLTQLTMTKWELRMPYEDPRKPMEPPQGARLFKLLTGETDASLCPGKHVTGKVIKNNDFGSQIKL-EGDVPGFIP---LRNLADDHVESADDIVQVGTVVNAIITQVKMDHMCVDLSLKREDFKKKSSEWERPASLAPLDPYFDRAAALAIDAEKDKERDERLESLRLKVGGTRIEGDDDAAEGGV-AHRRSGKVTRRACAHPAFRNATHDTVDRELKDAGDAMIGEALVRPSNKSCDSLAVHWMVRPGCIKVIEVLEEDKDTDASIGNRLIVKKEVYESIDELLGRFIAPMNDRVEEVQHHRKFMDKLEDEVDERLQEMKRANPKGVFYQVCWSESYPGYISLRFIMNRSCRHHTIGITPDGFLWGGKTFGNLDRLMNEFKKN 1099
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|1210528215|dbj|GAX13330.1| (transcription elongation factor SPT6 [Fistulifera solaris]) HSP 1 Score: 196.438 bits (498), Expect = 1.205e-49 Identity = 145/490 (29.59%), Postives = 239/490 (48.78%), Query Frame = 0 Query: 21 LDNTRIHPECYLTHEWVGKVIRDAMEQADPTM---GINELVRLVMQDSF----KILLATLCPPSEQGRPIDRLLV----AEIP-----DELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVDENAARVRLDQCVVTGY-LHRSRYPNMQRDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTAR--DWPRPPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDD---------------ERWRTVNHLEAEKVLKQQGK--VGEWLFRPSG--SGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSFRNNTFRSCDEVSDYFKEHFR 472 LD TR+HP+ Y+ + W K+ DA+E+ DP + VR VM DS ++ AT P + +P D++ L+L+ FAN +E G+G+ + ++ IK E R P DPR P +S DK+F L++GE+D +LR G +TG+V + + +RV+L+ + L +++ DF V V V VVTE++K ++V +S ED + W RP SL LD FD A K ++ +K + V + L R VD +R + E E+ L G VGE L RPS S S+++ W+ E ++ I V EE KE ++G L ++ + +D+++ ++I PMND ++ + SHRKF + +E+V+A+L+ KK +P + Y PG + + + ++P+G S+ + T+ + D + D FK++ R Sbjct: 1306 LDGTRLHPDVYIRNNWALKIAFDALEREDPKTKESAAIKAVRDVMDDSHLEVERLFKATKAEWERHYGPTFNIKEWDPRVNVPHDQWRDKVEELDLDTFANMIEQNGHGRWHTHLEMIKWEFRLPAADPRKPLEPLSGDKVFHLITGESDQSLRPGKEITGKVIRNGDFGSRVKLEGDIPAFIPLRNLSDEHVESADDF---VSVGQIVTAVVTEVKKDHMTVDMSLKLEDFRKKPSSWERPTSLFSLDECFDIQAANKIEDDNAKKRDAHVDALL---VSLGRTGDDVDGLRKGKRRVVRRACTHPAFRNAKNKEVERELLDGGSQMVGEALIRPSNKSSDSLAIHWVVKEGMIKVIEVLEENKETDASIGNILKIKDDTFGSIDELLGRFIAPMNDYVEELVSHRKFLDLTEEEVDAKLKDEKKANPKSIPYALCWLEMHPGYASLRFVASSTPRNHTIGISPKGFSWNSITYPNLDVLIDGFKKNPR 1789
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|695388092|ref|XP_009519091.1| (hypothetical protein PHYSODRAFT_349766 [Phytophthora sojae] >gi|348683988|gb|EGZ23803.1| hypothetical protein PHYSODRAFT_349766 [Phytophthora sojae]) HSP 1 Score: 159.073 bits (401), Expect = 3.149e-37 Identity = 130/461 (28.20%), Postives = 228/461 (49.46%), Query Frame = 0 Query: 18 VNLLDNTRIHPECYLTHEWVGKVIRDA-----MEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVD-ENAARVRLDQCVVTGYLHRSRYPNMQRDM---DFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARD-------WPR--------PPSLPPLDRHFDEARALKEYEERRRKIEEKVRLAKEGKLRLSRRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPS--GSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSF 452 +N LD+TRIHPE Y K+ DA ++ DP + V M S + + PP+ RL AEI D L+ L+L +A LE G ++ IK+ELR+P+ D RA ++ ++ LF L++GET TLR GM V + + + RVRL Q + LHR R P+ D+ F + V+ + + ++ E R +++ C L +PR S+ +DR +E A E++ + R+ +G R++R++ +R +N A + L++Q VGE + RPS G+ ++L+W L+ + H ++E++K + +G+ L ++ Y+ +D+++A+++ PMN L+D V ++ ++ ++KE VE +L KK+HPS++ Y + + PG F + +I + ++V G F Sbjct: 1014 LNPLDDTRIHPESYYM---AVKICGDANNNSTIDMYDPNH-YSYAVEDTMYQSASAIRSRNAPPNT------RLGDAEIQDVLSELDLSAYAGRLELQKKGPKLLTLEYIKRELRYPYFDKRAKYQVPKDEDLFFLLNGETRETLRIGMIVPATLLHMSGDEFVRVRL-QSGMRSSLHRERLPDYLSDVRPQTFPKGITVNAKILAIQSDRE-GRYELQLGCNRRSLIDMSMCFYPERFPRYTNSKLVESDSMERVDRLLNEPPA---EEDKATTFTQATRV--QGSHPSRRKKRQIAHPLFRNINCQTAMQYLREQ-PVGEVVIRPSTLGTDHLTLTWKMLDGVYRHFDIQEKDKPSEARIGQTLIIKEEKYENIDELIARFVDPMNSLVDDVIRYKYYKNVSKESVEEDLIKQKKEHPSRIPYALHVYSKFPGCFSITYIARETPRSCHMEVKSGGFRF 1456
BLAST of EWM30000.1 vs. NCBI_GenBank
Match: gi|1214713496|gb|OWZ24386.1| (hypothetical protein PHMEG_000564 [Phytophthora megakarya]) HSP 1 Score: 158.688 bits (400), Expect = 4.696e-37 Identity = 143/513 (27.88%), Postives = 245/513 (47.76%), Query Frame = 0 Query: 18 VNLLDNTRIHPECYLTHEWVGKVIRDA-----MEQADPTMGINELVRLVMQDSFKILLATLCPPSEQGRPIDRLLVAEIPDELASLNLEEFANYLENTGNGKHYQQMDQIKQELRFPFRDPRAPFRGISEDKLFELVSGETDATLRSGMPVTGRVWKVD-ENAARVRLDQCVVTGYLHRSRYPNMQ---RDMDFEAMVPVDTPVEGVVTEIEKSRISVRISCLAEDLTARDWPRPPSLPPLDRHFDEARALKEYEERRRKI-------EEKVRLAKEGKLRLS----RRQRKVDDERWRTVNHLEAEKVLKQQGKVGEWLFRPS--GSGSISLSWLALEDLVLHIPVKEEEKEAGDAVGKKLTVQGRVYQELDQIVAQYIQPMNDLIDSVTSHRKFRRMAKEQVEAELRASKKKHPSQVFYLYYPDPRRPGSFKMAHIVKHQIFGEPVDVTPRGLSF----RNNTFRSCDEVSDYFK-EHFRDAVSLSSSSTSTAMPPTDSSTLAPAPTSRPP 503 +N LD+TRIHPE Y K+ DA ++ DP + V M S + + PP+ RL AEI D L+ L+L +A LE G ++ IK+ELR+P+ D RA ++ ++ LF L+SGET TLR GM V + + ++ RVRL Q + LHR R P+ R F + V+ + + + E R +++ C L P P R+ +E + ER ++ E+K + ++ + R++R++ +R +N A + L++Q VGE + RPS G+ ++L+W LE + H + E++K + +G+ L ++ Y+ +D+++A+++ PMN L+D V ++ + +KE VE +L KK+HPS++ Y + + PG F + +I + ++V G F ++ S + +FK + S+SS +T+ DSS+ A S P Sbjct: 1004 LNPLDDTRIHPESYYM---AVKICGDANNNSTIDMYDPNH-YSYAVEDTMYQSASAIRSRNAPPNT------RLGDAEIQDVLSELDLSAYAGRLELQKKGPKLLTLEYIKRELRYPYFDKRAKYQVPKDEDLFFLLSGETRETLRVGMIVPATLLHMSGDDFVRVRL-QSGMRSSLHRERLPDYLMEIRPQSFPKGITVNAKILDIQADRE-GRFELQLGCNRRSLIDMSMCFLPDRFP--RYTNEQAVENDSRERVDRLLNEPPVEEDKTTFTQATRVPGAHPSRRKKRQIAHPLFRNINCHTAMQYLREQ-PVGEVVIRPSTLGTDHLTLTWKMLEGVYRHFDIHEKDKPSEARIGQTLIIKEEKYENIDELIARFVDPMNSLVDDVVRYKYYNSASKESVEEDLIKQKKEHPSRIPYALHVYSKFPGCFSITYIARETPRSCHMEVKSGGYRFFGRIESSILPSLSQALQFFKMKALVVNGPASNSSRTTSYQRNDSSSGPFAQRSSAP 1501 The following BLAST results are available for this feature:
BLAST of EWM30000.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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