EWM24022.1, cds6661 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|585105309|gb|EWM24022.1| (hypothetical protein Naga_100040g27 [Nannochloropsis gaditana]) HSP 1 Score: 784.637 bits (2025), Expect = 0.000e+0 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
Query: 1 MRQRANLNLPQLLQLVNTTFRERMFRFHPRITVASIVAIAALSPKTMERSTFLVHAMKPGVNACGGAKSWACNVGTSSRASFAASRGSNFNQLPPVAFLSHKSSLTSNREYSRGGKDTITHAFNCKSVTTPIKSGNLLWSIEQKHSYAARDLIRHFASSSSSNPPPTPPRYPGPDDEERKKVHEKVESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVKEKLGVVSDKAHDIKEAAKEKVTGTKEALEDTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMKGKSEQAKKTRDEAQNRAERAAQELDTSKKEK 381
MRQRANLNLPQLLQLVNTTFRERMFRFHPRITVASIVAIAALSPKTMERSTFLVHAMKPGVNACGGAKSWACNVGTSSRASFAASRGSNFNQLPPVAFLSHKSSLTSNREYSRGGKDTITHAFNCKSVTTPIKSGNLLWSIEQKHSYAARDLIRHFASSSSSNPPPTPPRYPGPDDEERKKVHEKVESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVKEKLGVVSDKAHDIKEAAKEKVTGTKEALEDTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMKGKSEQAKKTRDEAQNRAERAAQELDTSKKEK
Sbjct: 1 MRQRANLNLPQLLQLVNTTFRERMFRFHPRITVASIVAIAALSPKTMERSTFLVHAMKPGVNACGGAKSWACNVGTSSRASFAASRGSNFNQLPPVAFLSHKSSLTSNREYSRGGKDTITHAFNCKSVTTPIKSGNLLWSIEQKHSYAARDLIRHFASSSSSNPPPTPPRYPGPDDEERKKVHEKVESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVKEKLGVVSDKAHDIKEAAKEKVTGTKEALEDTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMKGKSEQAKKTRDEAQNRAERAAQELDTSKKEK 381
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920148|ref|NP_001256168.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571154|emb|CCF23419.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 72.0182 bits (175), Expect = 5.250e-10 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0
Query: 187 ESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMK 350
+ A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K
Sbjct: 545 DKAGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSK 719
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920156|ref|NP_001256172.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|332078423|emb|CCA65580.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 71.2478 bits (173), Expect = 6.132e-10 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0
Query: 187 ESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMK 350
+ A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K
Sbjct: 181 DKAGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSK 355
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920136|ref|NP_001256162.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571155|emb|CCF23420.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 71.2478 bits (173), Expect = 8.894e-10 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0
Query: 187 ESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMK 350
+ A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K
Sbjct: 593 DKAGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSK 767
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920142|ref|NP_001256165.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571153|emb|CCF23418.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 70.8626 bits (172), Expect = 1.175e-9 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0
Query: 187 ESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMK 350
+ A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K
Sbjct: 577 DKAGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSK 751
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920154|ref|NP_001256171.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|2353333|gb|AAB69446.1| Ce-LEA [Caenorhabditis elegans] >gi|3924819|emb|CAB05543.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 70.8626 bits (172), Expect = 1.311e-9 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0
Query: 187 ESAHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMK 350
+ A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K
Sbjct: 505 DKAGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSK 679
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920144|ref|NP_001256166.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571160|emb|CCF23425.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 69.707 bits (169), Expect = 3.928e-9 Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = 0
Query: 189 AHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMKGKSE 354
A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K +E
Sbjct: 547 AGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSKSITE 723
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920132|ref|NP_001256160.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571161|emb|CCF23426.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 69.3218 bits (168), Expect = 5.354e-9 Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = 0
Query: 189 AHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMKGKSE 354
A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K +E
Sbjct: 595 AGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSKSITE 771
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920138|ref|NP_001256163.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|371571158|emb|CCF23423.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 68.9366 bits (167), Expect = 6.913e-9 Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = 0
Query: 189 AHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMKGKSE 354
A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K +E
Sbjct: 579 AGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSKSITE 755
BLAST of EWM24022.1 vs. NCBI_GenBank
Match: gi|392920150|ref|NP_001256169.1| (plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans] >gi|332078424|emb|CCA65581.1| plant Late Embryo Abundant (LEA) related [Caenorhabditis elegans]) HSP 1 Score: 68.5514 bits (166), Expect = 8.024e-9 Identity = 61/177 (34.46%), Postives = 96/177 (54.24%), Query Frame = 0
Query: 189 AHEHKSKAGELYDEVKDEAGTAWQGTKNFASEAKEGIVDAAVAAKDKVK---EKLG--------VVSDKAHDIKEAAKEKVTGTKEALE----DTTEQAKEKASEAYEKVSDTAYEYKERAEEAAEHAMKVSTEEEEKLAEQLQQRATEAKSTATDRLYRAQESVEEGVEEAKDYMK 350
A + K KA + +D KD+AG AW TK+ A++AK+ DAA AKDK K EK G V +KA DI ++ K T +K+ +E D AK+KAS+A++K D A E K++A +A ++ + ++ + + +A++A T D+ A+ES + + AKD K
Sbjct: 507 AGDAKDKAADAWDTTKDKAGDAWDSTKDHAADAKDKASDAAGDAKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKASDAWDKTKDKAGEAKDKAGDAWDN----TKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGDAADSAKDKSK 679 The following BLAST results are available for this feature:
BLAST of EWM24022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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