EWM24031.1, cds6655 (CDS) Nannochloropsis gaditana

Overview
NameEWM24031.1
Unique Namecds6655
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:221641..223860 +
Alignment locationCM002469.1:223928..224135 +
Alignment locationCM002469.1:224218..224309 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24031.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100040g20.2029.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:221641..223860 +
CM002469.1supercontigCM002469.1:223928..224135 +
CM002469.1supercontigCM002469.1:224218..224309 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24031.1 vs. NCBI_GenBank
Match: gi|585105318|gb|EWM24031.1| (hypothetical protein Naga_100040g20 [Nannochloropsis gaditana])

HSP 1 Score: 1705.26 bits (4415), Expect = 0.000e+0
Identity = 839/839 (100.00%), Postives = 839/839 (100.00%), Query Frame = 0 
Query:    1 MKSQIALLAVTFPPLLGVGAFVIPGKGRLPASVPISPIKTIFTIFTASKPQLAPLQAKVDLFNRASLPSETGNNHSGGEASPSERVPEKEKLPGDFREALRNALWDLDDKIHEFLPYDEASAEVDPMYFVHAIQDRLNQIASSRKMASKTPAKSSPAATHSSTSAVDRDVSLTSTTAVTSLQCSAQDVLSKTQAAATATQAPVVEALQEGIKQVPPPPPATPSAVLSSPYEAEKASSASSSPSPGITPGEGGSTTLMYREDTAAVKTRSKRWVEERVRLDRARPGGAPKPALESPPRTSAPVAPSSRDVGAGNAGKRASQPRWRRDGDREEALRRREKVQIARQQRQQELQALAVAEASKPKKEAPASASVQGPFAAEDPPLKVSKPAMEATVAAEMAQVLSQPRNVKRMTTRADRSRGVLVVDGVEDLTMPAATTTVQEAMRQAASQRPKALIDTAEELRIGPLETTVSPRMVTPPSPTLTGAAEEDLNFMPPADRSSVEHILLDSKTAAVEEWHRTRSLEQEMSLEDKVLAVESRLMDEIRAGPSEAILNYVTVLERIGEHQALPGKTSVSEGPQRWDLAYSSLPVSPFLSLPRFLARFLVNVAVKMEGGGKTVVFQAVFKFLEWFPRLRRTQTATVSVLTPRKSVEVMNGRPRFRLGRLFTITQPRLRLPFIRNAKKATDSLAPPELTDTCTYMGAHLKICRWTRSPGVSAEPLLAVFFRGHSPAKNQEWGVEEEGEGRCPNLAWPREWSEGKDCAEGGIKVKVLCNVRCVLYTYLVLRLTHWRKMEEVRWPFAAPGVMHKWKRVRTCWLGYLSVLCRGCSEDFIGQEKKDWFLIP 839
            MKSQIALLAVTFPPLLGVGAFVIPGKGRLPASVPISPIKTIFTIFTASKPQLAPLQAKVDLFNRASLPSETGNNHSGGEASPSERVPEKEKLPGDFREALRNALWDLDDKIHEFLPYDEASAEVDPMYFVHAIQDRLNQIASSRKMASKTPAKSSPAATHSSTSAVDRDVSLTSTTAVTSLQCSAQDVLSKTQAAATATQAPVVEALQEGIKQVPPPPPATPSAVLSSPYEAEKASSASSSPSPGITPGEGGSTTLMYREDTAAVKTRSKRWVEERVRLDRARPGGAPKPALESPPRTSAPVAPSSRDVGAGNAGKRASQPRWRRDGDREEALRRREKVQIARQQRQQELQALAVAEASKPKKEAPASASVQGPFAAEDPPLKVSKPAMEATVAAEMAQVLSQPRNVKRMTTRADRSRGVLVVDGVEDLTMPAATTTVQEAMRQAASQRPKALIDTAEELRIGPLETTVSPRMVTPPSPTLTGAAEEDLNFMPPADRSSVEHILLDSKTAAVEEWHRTRSLEQEMSLEDKVLAVESRLMDEIRAGPSEAILNYVTVLERIGEHQALPGKTSVSEGPQRWDLAYSSLPVSPFLSLPRFLARFLVNVAVKMEGGGKTVVFQAVFKFLEWFPRLRRTQTATVSVLTPRKSVEVMNGRPRFRLGRLFTITQPRLRLPFIRNAKKATDSLAPPELTDTCTYMGAHLKICRWTRSPGVSAEPLLAVFFRGHSPAKNQEWGVEEEGEGRCPNLAWPREWSEGKDCAEGGIKVKVLCNVRCVLYTYLVLRLTHWRKMEEVRWPFAAPGVMHKWKRVRTCWLGYLSVLCRGCSEDFIGQEKKDWFLIP
Sbjct:    1 MKSQIALLAVTFPPLLGVGAFVIPGKGRLPASVPISPIKTIFTIFTASKPQLAPLQAKVDLFNRASLPSETGNNHSGGEASPSERVPEKEKLPGDFREALRNALWDLDDKIHEFLPYDEASAEVDPMYFVHAIQDRLNQIASSRKMASKTPAKSSPAATHSSTSAVDRDVSLTSTTAVTSLQCSAQDVLSKTQAAATATQAPVVEALQEGIKQVPPPPPATPSAVLSSPYEAEKASSASSSPSPGITPGEGGSTTLMYREDTAAVKTRSKRWVEERVRLDRARPGGAPKPALESPPRTSAPVAPSSRDVGAGNAGKRASQPRWRRDGDREEALRRREKVQIARQQRQQELQALAVAEASKPKKEAPASASVQGPFAAEDPPLKVSKPAMEATVAAEMAQVLSQPRNVKRMTTRADRSRGVLVVDGVEDLTMPAATTTVQEAMRQAASQRPKALIDTAEELRIGPLETTVSPRMVTPPSPTLTGAAEEDLNFMPPADRSSVEHILLDSKTAAVEEWHRTRSLEQEMSLEDKVLAVESRLMDEIRAGPSEAILNYVTVLERIGEHQALPGKTSVSEGPQRWDLAYSSLPVSPFLSLPRFLARFLVNVAVKMEGGGKTVVFQAVFKFLEWFPRLRRTQTATVSVLTPRKSVEVMNGRPRFRLGRLFTITQPRLRLPFIRNAKKATDSLAPPELTDTCTYMGAHLKICRWTRSPGVSAEPLLAVFFRGHSPAKNQEWGVEEEGEGRCPNLAWPREWSEGKDCAEGGIKVKVLCNVRCVLYTYLVLRLTHWRKMEEVRWPFAAPGVMHKWKRVRTCWLGYLSVLCRGCSEDFIGQEKKDWFLIP 839
The following BLAST results are available for this feature:
BLAST of EWM24031.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105318|gb|EWM24031.1|0.000e+0100.00hypothetical protein Naga_100040g20 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6671rna6671Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications