EWM24021.1, cds6637 (CDS) Nannochloropsis gaditana

Overview
NameEWM24021.1
Unique Namecds6637
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:181114..181124 +
Alignment locationCM002469.1:181280..181413 +
Alignment locationCM002469.1:181566..181780 +
Alignment locationCM002469.1:181903..182274 +
Alignment locationCM002469.1:182456..182550 +
Alignment locationCM002469.1:182750..182910 +
Alignment locationCM002469.1:183065..183234 +
Alignment locationCM002469.1:183427..183816 +
Alignment locationCM002469.1:183896..184433 +
Alignment locationCM002469.1:184475..184737 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24021.1
Productputative chromatin remodelling complex atpase chain
Orig transcript idgnl|cribi|Naga_100040g1.2019.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:181114..181124 +
CM002469.1supercontigCM002469.1:181280..181413 +
CM002469.1supercontigCM002469.1:181566..181780 +
CM002469.1supercontigCM002469.1:181903..182274 +
CM002469.1supercontigCM002469.1:182456..182550 +
CM002469.1supercontigCM002469.1:182750..182910 +
CM002469.1supercontigCM002469.1:183065..183234 +
CM002469.1supercontigCM002469.1:183427..183816 +
CM002469.1supercontigCM002469.1:183896..184433 +
CM002469.1supercontigCM002469.1:184475..184737 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0003676nucleic acid binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006338chromatin remodeling
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR017884SANT_dom
IPR009057Homeodomain-like
IPR015195SLIDE
IPR001005SANT/Myb
IPR009071HMG_box_dom
Homology
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|585105308|gb|EWM24021.1| (putative chromatin remodelling complex atpase chain [Nannochloropsis gaditana])

HSP 1 Score: 1609.35 bits (4166), Expect = 0.000e+0
Identity = 782/782 (100.00%), Postives = 782/782 (100.00%), Query Frame = 0
Query:    1 MPSLLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYLVDHKEQVKRELGAAATNENIKSRIKALWRGEAPHVKDKYTARAREEEARYDREMNLYQTLLAQEEKKKATAAPEASTNPSTTSSVRSSGQGPSHSQTARVDSGAGGGGGEEEYHIPKKTAAAQATTAPPKEEDPAAMEQEKHQQEPQHHQGALSPKQDEVPYEPQQTQPTRNCRSGGRSFLWQCTLSEAVVSLEKCTPQTAKEKRIMTGHAFKLGWTGKGYIAEKEYVGGHDIREISMKEGERGKVYAATLIWFPY 782
            MPSLLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYLVDHKEQVKRELGAAATNENIKSRIKALWRGEAPHVKDKYTARAREEEARYDREMNLYQTLLAQEEKKKATAAPEASTNPSTTSSVRSSGQGPSHSQTARVDSGAGGGGGEEEYHIPKKTAAAQATTAPPKEEDPAAMEQEKHQQEPQHHQGALSPKQDEVPYEPQQTQPTRNCRSGGRSFLWQCTLSEAVVSLEKCTPQTAKEKRIMTGHAFKLGWTGKGYIAEKEYVGGHDIREISMKEGERGKVYAATLIWFPY
Sbjct:    1 MPSLLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYLVDHKEQVKRELGAAATNENIKSRIKALWRGEAPHVKDKYTARAREEEARYDREMNLYQTLLAQEEKKKATAAPEASTNPSTTSSVRSSGQGPSHSQTARVDSGAGGGGGEEEYHIPKKTAAAQATTAPPKEEDPAAMEQEKHQQEPQHHQGALSPKQDEVPYEPQQTQPTRNCRSGGRSFLWQCTLSEAVVSLEKCTPQTAKEKRIMTGHAFKLGWTGKGYIAEKEYVGGHDIREISMKEGERGKVYAATLIWFPY 782          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|553183947|ref|XP_005853999.1| (hypothetical protein NGA_0429000 [Nannochloropsis gaditana CCMP526] >gi|422295061|gb|EKU22360.1| hypothetical protein NGA_0429000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 794.267 bits (2050), Expect = 0.000e+0
Identity = 383/393 (97.46%), Postives = 387/393 (98.47%), Query Frame = 0
Query:    5 LEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEM 397
            LEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQ  +  ++  +M
Sbjct:  794 LEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQSSSSRRRHDDM 1186          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|298710164|emb|CBJ31874.1| (Probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus])

HSP 1 Score: 369.392 bits (947), Expect = 2.036e-107
Identity = 226/555 (40.72%), Postives = 312/555 (56.22%), Query Frame = 0
Query:    7 IEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGK-ETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGG----------------------LALDGIGSSASL------GGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKI-------------------NEIAVKERREEDARPIWHLRDDFTHLV 513
            +E KL+ +DKGDLLDF +DGG++ QV+EG DYS K  + +   G    Q  D GKRER+   S   +    ++ A   K     +   +PK LRLPR+D+   FYD++RL +L + EE  + E K    LP+D   +E+L   L  EK RLLSEGF DWS+  + +F RASAK+GR +Y++IA E+GK E++V+RYA+ FW KG    +  +W++ V  +EKGE+K+EEI RL  AT+  +S+F NPWE+L+F Y G QGK  +++  EDRYLLC  + YGYGNW+ V+ AIRR DRFRFDYFLRSC+AD LGKRCE LM+AAEKE+ E+  KR   E G      +R  E+ RR   + ER     +   K+ +E G+L E    K  + +R  LL     S+  G                       A+D +    +        GG      +G A K VP+ LV ELA    R+G+ GV KIV +F   + +   SKRQ+E KI                    E+A KE+R  D R  W++R+ F  L+
Sbjct:  774 MESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIK-----RRTMMPKHLRLPRMDEC-QFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKVRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSTAFAPADWERHVKNVEKGERKIEEINRLMGATRSFISKFANPWEQLTFQYTGTQGK--VFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWH-KRQGTERGAGPGGSERLGEEERRRVAERERHNSYKDFQGKVEKETGKLTELHLDK--SRLRESLLADGGASAGSGPAGGADSATGGGGKEKTGAGVSSAVDNVDRQLAYLVAQNQAGGSSSSRAQGQA-KPVPDRLVGELARFACRSGSKGVDKIVTDFTAIHPE--ASKRQVEKKIQASDVPVDPQDLEERRGSVQEVAYKEKRAGDVRDSWYIREGFESLL 1314          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|224003061|ref|XP_002291202.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220972978|gb|EED91309.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 286.189 bits (731), Expect = 9.870e-80
Identity = 157/342 (45.91%), Postives = 224/342 (65.50%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGK---IGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYREL-------KNNDALPSDPAEWELLTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRK--GEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKE 331
            E+ +KL+AA KGD+LDF++DGG+S Q FEG DYS++     F     L + D+GKRERR    N N+   +++MA  G         K +KLPK  RLPR+++ W  +DR+ L  LQ++EE  +R L       K  +A      E + + P+L++E    KARLL+EGF DWSR+H++ F +ASAKYGRT+Y KIA ++GK    V+ YAE FW +  G++  S+ E  +VV  IEKGEK++E++  L + T+ L+S F+NPW EL F ++    K++ ++ +EDR+LLC+ + YGYG WE ++ AIRR   FRFDYFL+S   D +G+RCEQLMRAAEKE
Sbjct:  655 ELNDKLQAAQKGDMLDFKLDGGLSAQTFEGIDYSEEAKNAQFQA-EILGIMDVGKRERRTVAYNENQ-LYMQQMAQQGANPPKKKVKKEIKLPKMFRLPRMEE-WQMFDRDSLNALQEVEEQAFRALPEDIQETKEGEAEEKVEPESKEMPPLLSDEQKVEKARLLAEGFADWSRHHYSSFVKASAKYGRTNYAKIAIDVGKPVSAVKTYAEAFWNEEFGKKRFSEHEHDRVVKLIEKGEKRIEDVKGLQRGTKILISLFENPWVELQFTHVN--CKDKKFTADEDRFLLCWAHKYGYGQWEAIKFAIRRSSNFRFDYFLKSLPPDAIGRRCEQLMRAAEKE 991          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|219121950|ref|XP_002181319.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407305|gb|EEC47242.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 285.034 bits (728), Expect = 6.360e-78
Identity = 161/352 (45.74%), Postives = 227/352 (64.49%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRM--AVDG-KIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNN------------------DALPSDPAEWELLTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFW-RKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKE 331
            E+ +KLKAADKGDLLDF++DG  SVQ FEG DYS     +  +    L +FD+GKRER+  ++N NE +L +R   A+ G K   + K ++LPK LRLPR+++ W  YDRE+L+E+Q+ EE  ++ L                     +  P  P E   L P+L EE    K RLL+EGF DW+R H+  F RASA++GR   EKIA E+GK +++V R+   FW   G+  +++ E+++VV  +E+GEKK+ EI  L + T+ L+  F NPWEEL F +I    K+++++ EEDR+LLC+T  YGYG+W+ ++ A+RR   FRFDYFLRS   + LGKRCEQLM+AAEKE
Sbjct:  833 ELNDKLKAADKGDLLDFKLDGS-SVQTFEGVDYSTSALAQAKSQAEMLGIFDLGKRERK--EANYNENSLYQRQIAALQGVKEIKKKKDIRLPKHLRLPRMEE-WQMYDREKLQEIQEEEESAFKALPEELQKLATMKRVEQVEEAEIEPEPQLPFE---LPPLLTEERQAEKERLLAEGFSDWNRFHYQAFWRASARHGRRQVEKIALEVGKDDQQVARFLSSFWGEVGKNRIAEHEYERVVKFVERGEKKIGEIKGLERGTRILVGIFDNPWEELEFTHIN--CKDKLFTIEEDRHLLCWTRKYGYGHWQAIKNAVRRNPNFRFDYFLRSLPVELLGKRCEQLMKAAEKE 1175          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|970663865|gb|KUG00934.1| (chromatin-remodeling complex ATPase chain [Phytophthora nicotianae])

HSP 1 Score: 265.388 bits (677), Expect = 2.773e-71
Identity = 167/402 (41.54%), Postives = 243/402 (60.45%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQL-------QMFD-IGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRR-----REKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKA 394
            E+++K++A DKGDLLDF++DGG   Q  +G DYS +  KE    L +L       QM + +GKRERR    +         ++++GK  +R K  +LPK LRLPRID+ W FY+R+RL EL ++E   Y + K     P  P   + LT    +EK +LLSEGF DW++  F LF +  A+YGR + E +A E+ K  EE++RY++VF  +G++ LSD  W K++ +IEKGE KL EI RLT+ T   + R+ NPWE++  +Y G+ GK  +++ EEDR LLC  N +GYG W+ ++  I   + F FDY+LRS TA  +G+RC+ LMR  EK+N + E +     D RR     R K D+ +  AR   D ++ +AR+ EL  K   E  R+Q   +AK+A
Sbjct:  761 EMKQKMQAHDKGDLLDFKLDGG-GCQNHDGIDYSNE--KERQEELKRLADAELARQMAEGMGKRERRTVLRH-------SHVSLEGK--HRTKQKQLPKALRLPRIDE-WQFYNRKRLIELHEIECANYEQAKTEMEKPPLPPHAQYLTEEQLQEKEQLLSEGFSDWNKPQFFLFIKLLARYGRNNIEAVAREMMKPLEEIERYSKVFLSRGQDELSD--WPKILKSIEKGESKLLEIERLTEETARKVKRYANPWEDMPINYQGKGGK--VFTEEEDRVLLCLVNQFGYGAWDRIKQEICSMEMFSFDYYLRSRTAAEIGRRCDALMRICEKDNADLEIREKKENDVRRVLQEQRAKLDQQLAAAR--ADVKQHQARVDELIMK---EAKRMQRQREAKRA 1140          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|675175731|ref|XP_008896750.1| (hypothetical protein PPTG_05034 [Phytophthora parasitica INRA-310] >gi|566011701|gb|ETI34612.1| hypothetical protein F443_18902 [Phytophthora parasitica P1569] >gi|567949222|gb|ETK74954.1| hypothetical protein L915_18334 [Phytophthora parasitica] >gi|567977883|gb|ETL28377.1| hypothetical protein L916_18239 [Phytophthora parasitica] >gi|568007400|gb|ETL81639.1| hypothetical protein L917_18059 [Phytophthora parasitica] >gi|568037249|gb|ETM34836.1| hypothetical protein L914_18145 [Phytophthora parasitica] >gi|568102491|gb|ETN17162.1| hypothetical protein PPTG_05034 [Phytophthora parasitica INRA-310] >gi|570315459|gb|ETO63407.1| hypothetical protein F444_18861 [Phytophthora parasitica P1976] >gi|570939252|gb|ETP04509.1| hypothetical protein F441_18715 [Phytophthora parasitica CJ01A1] >gi|570969536|gb|ETP32655.1| hypothetical protein F442_18685 [Phytophthora parasitica P10297])

HSP 1 Score: 265.388 bits (677), Expect = 2.858e-71
Identity = 167/402 (41.54%), Postives = 243/402 (60.45%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQL-------QMFD-IGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRR-----REKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKA 394
            E+++K++A DKGDLLDF++DGG   Q  +G DYS +  KE    L +L       QM + +GKRERR    +         ++++GK  +R K  +LPK LRLPRID+ W FY+R+RL EL ++E   Y + K     P  P   + LT    +EK +LLSEGF DW++  F LF +  A+YGR + E +A E+ K  EE++RY++VF  +G++ LSD  W K++ +IEKGE KL EI RLT+ T   + R+ NPWE++  +Y G+ GK  +++ EEDR LLC  N +GYG W+ ++  I   + F FDY+LRS TA  +G+RC+ LMR  EK+N + E +     D RR     R K D+ +  AR   D ++ +AR+ EL  K   E  R+Q   +AK+A
Sbjct:  793 EMKQKMQAHDKGDLLDFKLDGG-GCQNHDGIDYSNE--KERQEELKRLADAELARQMAEGMGKRERRTVLRH-------SHVSLEGK--HRTKQKQLPKALRLPRIDE-WQFYNRKRLIELHEIECANYEQAKTEMEKPPLPPHAQYLTEEQLQEKEQLLSEGFSDWNKPQFFLFIKLLARYGRNNIEAVAREMMKPLEEIERYSKVFLSRGQDELSD--WPKILKSIEKGESKLLEIERLTEETARKVKRYANPWEDMPINYQGKGGK--VFTEEEDRVLLCLVNQFGYGAWDRIKQEICSMEMFSFDYYLRSRTAAEIGRRCDALMRICEKDNADLEIREKKENDVRRVLQEQRAKLDQQLAAAR--ADVKQHQARVDELIMK---EAKRMQRQREAKRA 1172          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|1210521141|dbj|GAX19889.1| (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Fistulifera solaris])

HSP 1 Score: 264.618 bits (675), Expect = 5.086e-71
Identity = 164/364 (45.05%), Postives = 231/364 (63.46%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRM--AVDGKIG---NRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYREL---------------KNNDALPSDPAEWEL-----LTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGR-TSYEKIAGEIGKTEEEVQRYAEVFW-RKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKK 338
            E+ EKLKAADKGDLLDF++DG  SVQ FEG DYS    ++   G+     FDIGKRER+  ++N NE +L +R   A+ G I     + K +KLPK LRLPR+++ W  YDR RL ++Q+ EED ++ L               + +D+L   P   E      L P+L+ E    K +LLSEGF DW R+ F  F + SAK+GR  +  KIA E+ K+E+ V+ + + FW   G+  +S+ E+ +VV  IE+GEKK+EEI  L + T+ L+S F NPW+EL F +I    K+++++ +EDRYLLC+   YGYG W+ +++AIRR   FRFDYFLRS   + +G+RCEQLM+AAEKE  + E+K
Sbjct:  821 EMNEKLKAADKGDLLDFKLDGS-SVQTFEGVDYSLAQARKEMLGI-----FDIGKRERK--EANYNENSLYQRQVAAMQGNITPKLKKKKALKLPKHLRLPRMEE-WQMYDRPRLLKIQEEEEDAFKSLPEEQQKLALNEHSKSEQSDSLEDAPIGDEEKIPFDLPPLLSTERQAEKDQLLSEGFSDWKRHDFATFIKLSAKFGRENALSKIALELSKSEQAVKEFTDAFWGDIGKSRISEHEYDRVVKLIERGEKKIEEIKGLERGTKILVSLFDNPWKELEFTHIN--CKDKMFTVDEDRYLLCWARKYGYGQWQAIKLAIRRNPLFRFDYFLRSLPVEQIGRRCEQLMKAAEKEVEQLERK 1173          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|1173950570|gb|OQR98525.1| (chromatin-remodeling complex ATPase chain [Achlya hypogyna])

HSP 1 Score: 263.848 bits (673), Expect = 7.341e-71
Identity = 190/542 (35.06%), Postives = 285/542 (52.58%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFD--------IGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYR--------ELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKR-----LAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYL 526
            E+ +K++A DKGDLL+F++DGG ++QV +G DYSK+  KE    L +L   +        +GKRERR          +LK   V GK+    K  +LPK LRLPR+D+ W FY R+RL EL +ME + Y         ELK  + LP          P L EEK  L+S+ F DW++  F LF +  A+YGR +   +A E+ K  +EV RYAE FWR+G E+    +W+K+  +IEKGE KL EI RL + T   + R++NP E+L  +Y G+ GK  +++ EEDR LLC  N YGYG+W+ ++  I + D   FDY+L+S +A  +G+RC+ LMR  EK+N+++E K      L VE  ++RE+  + + DA+   D    +AR+ E+  K   E  ++Q   +AK+A                   A++   S+                  ++ E LV EL  M+  +     + I  +F  K+ K  +S   I  +I  IA      +D +P W +  D+   +  +K R A  L L
Sbjct:  757 EMNQKMQAHDKGDLLNFKLDGG-NMQVVDGVDYSKE--KERLEELKRLADLEFAKTLADGMGKRERR---------TVLKTDEVSGKV-KASKMKQLPKALRLPRMDE-WQFYQRQRLVELHEMEVNAYEAAKAAATDELKEANYLP----------PELQEEKDELISQAFADWNKPQFFLFVKLLARYGRANLTAVAREMSKPLDEVTRYAETFWRRGSEL---NDWEKLRKSIEKGESKLLEIERLAEQTALKVKRYENPLEDLVINYQGKGGK--LFTEEEDRLLLCLVNTYGYGSWDKIKREIHQADVCTFDYYLKSRSAAEIGRRCDALMRICEKDNVDFELKEKRDSALRVELQKQREELAQRIADAK--ADLNRNQARVDEMIMK---EAKKMQAQREAKRA-------------KKEPKPAVEKKPST------------------SMSETLVEELVQMIATSTDKEASTIALKFCAKHVKCQLS--SILQQIQHIATPIGNAKDGQPAWDVHTDYLSYLPTKK-RPASVLTL 1230          
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|1210512297|dbj|GAX28566.1| (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Fistulifera solaris])

HSP 1 Score: 263.848 bits (673), Expect = 1.077e-70
Identity = 177/443 (39.95%), Postives = 259/443 (58.47%), Query Frame = 0
Query:    6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRM--AVDGKIGNRGKHMKLPK---QLRLPRIDDVWTFYDRERLRELQKMEEDRYREL---------------KNNDALPSDPAEWEL-----LTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGR-TSYEKIAGEIGKTEEEVQRYAEVFW-RKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDA------------RRIKDD--------EERKARITELDAKLGEEEGRLQEFADAKKAAEM 397
            E+ EKLKAADKGDLLDF++DG  SVQ FEG DYS    ++   G+     FD+GKRER+  ++N NE +L +R   A+ G I  + K  K  K    LRLPR+++ W  YDR RL ++Q+ EED ++ L               + +D+L   P   E      L P+L+ E    K +LL EGF DW R+ F  F + SAK+GR  +  KIA E+ K+E+ V+ + + FW   G+  +S+ E+ +VV  IE+GEKK+EEI  L + T+ L+S F NPW+EL F +I    K+++++ +EDRYLLC+   YGYG W+ +++AIRR   FRFDYFLRS   + +G+RCEQLM+AAEKE  + E+K    ED     + D+S E A            +RI+ +        +E K ++ +L A++G  + RL+E  +    A +
Sbjct:  821 EMNEKLKAADKGDLLDFKLDGS-SVQTFEGVDYSLAQARKEMLGI-----FDLGKRERK--EANYNENSLYQRQVAAMQGNITQKPKKKKALKLPKHLRLPRMEE-WQMYDRPRLLKIQEEEEDAFKSLPEEQQKMALNEHSKSEQSDSLEDAPIGDEEKIPFELPPLLSTERQAEKDQLLLEGFSDWKRHDFATFIKLSAKFGRENALSKIALELSKSEQAVKEFTDAFWGDIGKSRISEHEYDRVVKLIERGEKKIEEIKGLERGTKILVSLFDNPWKELEFTHIN--CKDKMFTVDEDRYLLCWARKYGYGQWQAIKLAIRRNPLFRFDYFLRSLPVEQIGRRCEQLMKAAEKEVEQLERK--YREDNGFPTEPDQSGELAPVQLPKHRVLLRQRIQKERMEAELHQQELKKKVDDLSAQIGNLQKRLKELNEGAAVARV 1250          
The following BLAST results are available for this feature:
BLAST of EWM24021.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105308|gb|EWM24021.1|0.000e+0100.00putative chromatin remodelling complex atpase chai... [more]
gi|553183947|ref|XP_005853999.1|0.000e+097.46hypothetical protein NGA_0429000 [Nannochloropsis ... [more]
gi|298710164|emb|CBJ31874.1|2.036e-10740.72Probable chromatin remodelling complex ATPase chai... [more]
gi|224003061|ref|XP_002291202.1|9.870e-8045.91predicted protein, partial [Thalassiosira pseudona... [more]
gi|219121950|ref|XP_002181319.1|6.360e-7845.74predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|970663865|gb|KUG00934.1|2.773e-7141.54chromatin-remodeling complex ATPase chain [Phytoph... [more]
gi|675175731|ref|XP_008896750.1|2.858e-7141.54hypothetical protein PPTG_05034 [Phytophthora para... [more]
gi|1210521141|dbj|GAX19889.1|5.086e-7145.05SWI/SNF-related matrix-associated actin-dependent ... [more]
gi|1173950570|gb|OQR98525.1|7.341e-7135.06chromatin-remodeling complex ATPase chain [Achlya ... [more]
gi|1210512297|dbj|GAX28566.1|1.077e-7039.95SWI/SNF-related matrix-associated actin-dependent ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6653rna6653Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications