EWM24021.1, cds6637 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|585105308|gb|EWM24021.1| (putative chromatin remodelling complex atpase chain [Nannochloropsis gaditana]) HSP 1 Score: 1609.35 bits (4166), Expect = 0.000e+0 Identity = 782/782 (100.00%), Postives = 782/782 (100.00%), Query Frame = 0
Query: 1 MPSLLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYLVDHKEQVKRELGAAATNENIKSRIKALWRGEAPHVKDKYTARAREEEARYDREMNLYQTLLAQEEKKKATAAPEASTNPSTTSSVRSSGQGPSHSQTARVDSGAGGGGGEEEYHIPKKTAAAQATTAPPKEEDPAAMEQEKHQQEPQHHQGALSPKQDEVPYEPQQTQPTRNCRSGGRSFLWQCTLSEAVVSLEKCTPQTAKEKRIMTGHAFKLGWTGKGYIAEKEYVGGHDIREISMKEGERGKVYAATLIWFPY 782
MPSLLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYLVDHKEQVKRELGAAATNENIKSRIKALWRGEAPHVKDKYTARAREEEARYDREMNLYQTLLAQEEKKKATAAPEASTNPSTTSSVRSSGQGPSHSQTARVDSGAGGGGGEEEYHIPKKTAAAQATTAPPKEEDPAAMEQEKHQQEPQHHQGALSPKQDEVPYEPQQTQPTRNCRSGGRSFLWQCTLSEAVVSLEKCTPQTAKEKRIMTGHAFKLGWTGKGYIAEKEYVGGHDIREISMKEGERGKVYAATLIWFPY
Sbjct: 1 MPSLLEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYLVDHKEQVKRELGAAATNENIKSRIKALWRGEAPHVKDKYTARAREEEARYDREMNLYQTLLAQEEKKKATAAPEASTNPSTTSSVRSSGQGPSHSQTARVDSGAGGGGGEEEYHIPKKTAAAQATTAPPKEEDPAAMEQEKHQQEPQHHQGALSPKQDEVPYEPQQTQPTRNCRSGGRSFLWQCTLSEAVVSLEKCTPQTAKEKRIMTGHAFKLGWTGKGYIAEKEYVGGHDIREISMKEGERGKVYAATLIWFPY 782
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|553183947|ref|XP_005853999.1| (hypothetical protein NGA_0429000 [Nannochloropsis gaditana CCMP526] >gi|422295061|gb|EKU22360.1| hypothetical protein NGA_0429000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 794.267 bits (2050), Expect = 0.000e+0 Identity = 383/393 (97.46%), Postives = 387/393 (98.47%), Query Frame = 0
Query: 5 LEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEM 397
LEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQ + ++ +M
Sbjct: 794 LEIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQSSSSRRRHDDM 1186
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|298710164|emb|CBJ31874.1| (Probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus]) HSP 1 Score: 369.392 bits (947), Expect = 2.036e-107 Identity = 226/555 (40.72%), Postives = 312/555 (56.22%), Query Frame = 0
Query: 7 IEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGK-ETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGG----------------------LALDGIGSSASL------GGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKI-------------------NEIAVKERREEDARPIWHLRDDFTHLV 513
+E KL+ +DKGDLLDF +DGG++ QV+EG DYS K + + G Q D GKRER+ S + ++ A K + +PK LRLPR+D+ FYD++RL +L + EE + E K LP+D +E+L L EK RLLSEGF DWS+ + +F RASAK+GR +Y++IA E+GK E++V+RYA+ FW KG + +W++ V +EKGE+K+EEI RL AT+ +S+F NPWE+L+F Y G QGK +++ EDRYLLC + YGYGNW+ V+ AIRR DRFRFDYFLRSC+AD LGKRCE LM+AAEKE+ E+ KR E G +R E+ RR + ER + K+ +E G+L E K + +R LL S+ G A+D + + GG +G A K VP+ LV ELA R+G+ GV KIV +F + + SKRQ+E KI E+A KE+R D R W++R+ F L+
Sbjct: 774 MESKLQVSDKGDLLDFSLDGGIATQVYEGVDYSNKANRADAGGGAVPFQFIDTGKRERKKIASYKEDTFYRQQQAAAIK-----RRTMMPKHLRLPRMDEC-QFYDKKRLEQLHRKEEQLFVEAKEKGDLPNDLTNYEVLPEPLLSEKVRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSTAFAPADWERHVKNVEKGERKIEEINRLMGATRSFISKFANPWEQLTFQYTGTQGK--VFNAHEDRYLLCLAHKYGYGNWDLVKAAIRRSDRFRFDYFLRSCSADALGKRCEALMKAAEKEDAEWH-KRQGTERGAGPGGSERLGEEERRRVAERERHNSYKDFQGKVEKETGKLTELHLDK--SRLRESLLADGGASAGSGPAGGADSATGGGGKEKTGAGVSSAVDNVDRQLAYLVAQNQAGGSSSSRAQGQA-KPVPDRLVGELARFACRSGSKGVDKIVTDFTAIHPE--ASKRQVEKKIQASDVPVDPQDLEERRGSVQEVAYKEKRAGDVRDSWYIREGFESLL 1314
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|224003061|ref|XP_002291202.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220972978|gb|EED91309.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 286.189 bits (731), Expect = 9.870e-80 Identity = 157/342 (45.91%), Postives = 224/342 (65.50%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRMAVDGK---IGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYREL-------KNNDALPSDPAEWELLTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRK--GEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKE 331
E+ +KL+AA KGD+LDF++DGG+S Q FEG DYS++ F L + D+GKRERR N N+ +++MA G K +KLPK RLPR+++ W +DR+ L LQ++EE +R L K +A E + + P+L++E KARLL+EGF DWSR+H++ F +ASAKYGRT+Y KIA ++GK V+ YAE FW + G++ S+ E +VV IEKGEK++E++ L + T+ L+S F+NPW EL F ++ K++ ++ +EDR+LLC+ + YGYG WE ++ AIRR FRFDYFL+S D +G+RCEQLMRAAEKE
Sbjct: 655 ELNDKLQAAQKGDMLDFKLDGGLSAQTFEGIDYSEEAKNAQFQA-EILGIMDVGKRERRTVAYNENQ-LYMQQMAQQGANPPKKKVKKEIKLPKMFRLPRMEE-WQMFDRDSLNALQEVEEQAFRALPEDIQETKEGEAEEKVEPESKEMPPLLSDEQKVEKARLLAEGFADWSRHHYSSFVKASAKYGRTNYAKIAIDVGKPVSAVKTYAEAFWNEEFGKKRFSEHEHDRVVKLIEKGEKRIEDVKGLQRGTKILISLFENPWVELQFTHVN--CKDKKFTADEDRFLLCWAHKYGYGQWEAIKFAIRRSSNFRFDYFLKSLPPDAIGRRCEQLMRAAEKE 991
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|219121950|ref|XP_002181319.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407305|gb|EEC47242.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 285.034 bits (728), Expect = 6.360e-78 Identity = 161/352 (45.74%), Postives = 227/352 (64.49%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRM--AVDG-KIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNN------------------DALPSDPAEWELLTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFW-RKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKE 331
E+ +KLKAADKGDLLDF++DG SVQ FEG DYS + + L +FD+GKRER+ ++N NE +L +R A+ G K + K ++LPK LRLPR+++ W YDRE+L+E+Q+ EE ++ L + P P E L P+L EE K RLL+EGF DW+R H+ F RASA++GR EKIA E+GK +++V R+ FW G+ +++ E+++VV +E+GEKK+ EI L + T+ L+ F NPWEEL F +I K+++++ EEDR+LLC+T YGYG+W+ ++ A+RR FRFDYFLRS + LGKRCEQLM+AAEKE
Sbjct: 833 ELNDKLKAADKGDLLDFKLDGS-SVQTFEGVDYSTSALAQAKSQAEMLGIFDLGKRERK--EANYNENSLYQRQIAALQGVKEIKKKKDIRLPKHLRLPRMEE-WQMYDREKLQEIQEEEESAFKALPEELQKLATMKRVEQVEEAEIEPEPQLPFE---LPPLLTEERQAEKERLLAEGFSDWNRFHYQAFWRASARHGRRQVEKIALEVGKDDQQVARFLSSFWGEVGKNRIAEHEYERVVKFVERGEKKIGEIKGLERGTRILVGIFDNPWEELEFTHIN--CKDKLFTIEEDRHLLCWTRKYGYGHWQAIKNAVRRNPNFRFDYFLRSLPVELLGKRCEQLMKAAEKE 1175
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|970663865|gb|KUG00934.1| (chromatin-remodeling complex ATPase chain [Phytophthora nicotianae]) HSP 1 Score: 265.388 bits (677), Expect = 2.773e-71 Identity = 167/402 (41.54%), Postives = 243/402 (60.45%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQL-------QMFD-IGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRR-----REKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKA 394
E+++K++A DKGDLLDF++DGG Q +G DYS + KE L +L QM + +GKRERR + ++++GK +R K +LPK LRLPRID+ W FY+R+RL EL ++E Y + K P P + LT +EK +LLSEGF DW++ F LF + A+YGR + E +A E+ K EE++RY++VF +G++ LSD W K++ +IEKGE KL EI RLT+ T + R+ NPWE++ +Y G+ GK +++ EEDR LLC N +GYG W+ ++ I + F FDY+LRS TA +G+RC+ LMR EK+N + E + D RR R K D+ + AR D ++ +AR+ EL K E R+Q +AK+A
Sbjct: 761 EMKQKMQAHDKGDLLDFKLDGG-GCQNHDGIDYSNE--KERQEELKRLADAELARQMAEGMGKRERRTVLRH-------SHVSLEGK--HRTKQKQLPKALRLPRIDE-WQFYNRKRLIELHEIECANYEQAKTEMEKPPLPPHAQYLTEEQLQEKEQLLSEGFSDWNKPQFFLFIKLLARYGRNNIEAVAREMMKPLEEIERYSKVFLSRGQDELSD--WPKILKSIEKGESKLLEIERLTEETARKVKRYANPWEDMPINYQGKGGK--VFTEEEDRVLLCLVNQFGYGAWDRIKQEICSMEMFSFDYYLRSRTAAEIGRRCDALMRICEKDNADLEIREKKENDVRRVLQEQRAKLDQQLAAAR--ADVKQHQARVDELIMK---EAKRMQRQREAKRA 1140
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|675175731|ref|XP_008896750.1| (hypothetical protein PPTG_05034 [Phytophthora parasitica INRA-310] >gi|566011701|gb|ETI34612.1| hypothetical protein F443_18902 [Phytophthora parasitica P1569] >gi|567949222|gb|ETK74954.1| hypothetical protein L915_18334 [Phytophthora parasitica] >gi|567977883|gb|ETL28377.1| hypothetical protein L916_18239 [Phytophthora parasitica] >gi|568007400|gb|ETL81639.1| hypothetical protein L917_18059 [Phytophthora parasitica] >gi|568037249|gb|ETM34836.1| hypothetical protein L914_18145 [Phytophthora parasitica] >gi|568102491|gb|ETN17162.1| hypothetical protein PPTG_05034 [Phytophthora parasitica INRA-310] >gi|570315459|gb|ETO63407.1| hypothetical protein F444_18861 [Phytophthora parasitica P1976] >gi|570939252|gb|ETP04509.1| hypothetical protein F441_18715 [Phytophthora parasitica CJ01A1] >gi|570969536|gb|ETP32655.1| hypothetical protein F442_18685 [Phytophthora parasitica P10297]) HSP 1 Score: 265.388 bits (677), Expect = 2.858e-71 Identity = 167/402 (41.54%), Postives = 243/402 (60.45%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQL-------QMFD-IGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYRELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRR-----REKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKA 394
E+++K++A DKGDLLDF++DGG Q +G DYS + KE L +L QM + +GKRERR + ++++GK +R K +LPK LRLPRID+ W FY+R+RL EL ++E Y + K P P + LT +EK +LLSEGF DW++ F LF + A+YGR + E +A E+ K EE++RY++VF +G++ LSD W K++ +IEKGE KL EI RLT+ T + R+ NPWE++ +Y G+ GK +++ EEDR LLC N +GYG W+ ++ I + F FDY+LRS TA +G+RC+ LMR EK+N + E + D RR R K D+ + AR D ++ +AR+ EL K E R+Q +AK+A
Sbjct: 793 EMKQKMQAHDKGDLLDFKLDGG-GCQNHDGIDYSNE--KERQEELKRLADAELARQMAEGMGKRERRTVLRH-------SHVSLEGK--HRTKQKQLPKALRLPRIDE-WQFYNRKRLIELHEIECANYEQAKTEMEKPPLPPHAQYLTEEQLQEKEQLLSEGFSDWNKPQFFLFIKLLARYGRNNIEAVAREMMKPLEEIERYSKVFLSRGQDELSD--WPKILKSIEKGESKLLEIERLTEETARKVKRYANPWEDMPINYQGKGGK--VFTEEEDRVLLCLVNQFGYGAWDRIKQEICSMEMFSFDYYLRSRTAAEIGRRCDALMRICEKDNADLEIREKKENDVRRVLQEQRAKLDQQLAAAR--ADVKQHQARVDELIMK---EAKRMQRQREAKRA 1172
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|1210521141|dbj|GAX19889.1| (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Fistulifera solaris]) HSP 1 Score: 264.618 bits (675), Expect = 5.086e-71 Identity = 164/364 (45.05%), Postives = 231/364 (63.46%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRM--AVDGKIG---NRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYREL---------------KNNDALPSDPAEWEL-----LTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGR-TSYEKIAGEIGKTEEEVQRYAEVFW-RKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKK 338
E+ EKLKAADKGDLLDF++DG SVQ FEG DYS ++ G+ FDIGKRER+ ++N NE +L +R A+ G I + K +KLPK LRLPR+++ W YDR RL ++Q+ EED ++ L + +D+L P E L P+L+ E K +LLSEGF DW R+ F F + SAK+GR + KIA E+ K+E+ V+ + + FW G+ +S+ E+ +VV IE+GEKK+EEI L + T+ L+S F NPW+EL F +I K+++++ +EDRYLLC+ YGYG W+ +++AIRR FRFDYFLRS + +G+RCEQLM+AAEKE + E+K
Sbjct: 821 EMNEKLKAADKGDLLDFKLDGS-SVQTFEGVDYSLAQARKEMLGI-----FDIGKRERK--EANYNENSLYQRQVAAMQGNITPKLKKKKALKLPKHLRLPRMEE-WQMYDRPRLLKIQEEEEDAFKSLPEEQQKLALNEHSKSEQSDSLEDAPIGDEEKIPFDLPPLLSTERQAEKDQLLSEGFSDWKRHDFATFIKLSAKFGRENALSKIALELSKSEQAVKEFTDAFWGDIGKSRISEHEYDRVVKLIERGEKKIEEIKGLERGTKILVSLFDNPWKELEFTHIN--CKDKMFTVDEDRYLLCWARKYGYGQWQAIKLAIRRNPLFRFDYFLRSLPVEQIGRRCEQLMKAAEKEVEQLERK 1173
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|1173950570|gb|OQR98525.1| (chromatin-remodeling complex ATPase chain [Achlya hypogyna]) HSP 1 Score: 263.848 bits (673), Expect = 7.341e-71 Identity = 190/542 (35.06%), Postives = 285/542 (52.58%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFD--------IGKRERRPTQSNLNEGALLKRMAVDGKIGNRGKHMKLPKQLRLPRIDDVWTFYDRERLRELQKMEEDRYR--------ELKNNDALPSDPAEWELLTPVLAEEKARLLSEGFGDWSRNHFNLFCRASAKYGRTSYEKIAGEIGKTEEEVQRYAEVFWRKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKR-----LAVEDGRRREKEDRSVEDARRIKDDEERKARITELDAKLGEEEGRLQEFADAKKAAEMRLQLLKGLKVSSNGGLALDGIGSSASLGGGGGVGGGKGTAPKTVPEELVPELAMMVVRAGADGVTKIVAEFHGKYAKDGVSKRQIEMKINEIAVKERREEDARPIWHLRDDFTHLVKGRKARNAVTLYL 526
E+ +K++A DKGDLL+F++DGG ++QV +G DYSK+ KE L +L + +GKRERR +LK V GK+ K +LPK LRLPR+D+ W FY R+RL EL +ME + Y ELK + LP P L EEK L+S+ F DW++ F LF + A+YGR + +A E+ K +EV RYAE FWR+G E+ +W+K+ +IEKGE KL EI RL + T + R++NP E+L +Y G+ GK +++ EEDR LLC N YGYG+W+ ++ I + D FDY+L+S +A +G+RC+ LMR EK+N+++E K L VE ++RE+ + + DA+ D +AR+ E+ K E ++Q +AK+A A++ S+ ++ E LV EL M+ + + I +F K+ K +S I +I IA +D +P W + D+ + +K R A L L
Sbjct: 757 EMNQKMQAHDKGDLLNFKLDGG-NMQVVDGVDYSKE--KERLEELKRLADLEFAKTLADGMGKRERR---------TVLKTDEVSGKV-KASKMKQLPKALRLPRMDE-WQFYQRQRLVELHEMEVNAYEAAKAAATDELKEANYLP----------PELQEEKDELISQAFADWNKPQFFLFVKLLARYGRANLTAVAREMSKPLDEVTRYAETFWRRGSEL---NDWEKLRKSIEKGESKLLEIERLAEQTALKVKRYENPLEDLVINYQGKGGK--LFTEEEDRLLLCLVNTYGYGSWDKIKREIHQADVCTFDYYLKSRSAAEIGRRCDALMRICEKDNVDFELKEKRDSALRVELQKQREELAQRIADAK--ADLNRNQARVDEMIMK---EAKKMQAQREAKRA-------------KKEPKPAVEKKPST------------------SMSETLVEELVQMIATSTDKEASTIALKFCAKHVKCQLS--SILQQIQHIATPIGNAKDGQPAWDVHTDYLSYLPTKK-RPASVLTL 1230
BLAST of EWM24021.1 vs. NCBI_GenBank
Match: gi|1210512297|dbj|GAX28566.1| (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Fistulifera solaris]) HSP 1 Score: 263.848 bits (673), Expect = 1.077e-70 Identity = 177/443 (39.95%), Postives = 259/443 (58.47%), Query Frame = 0
Query: 6 EIEEKLKAADKGDLLDFRMDGGMSVQVFEGQDYSKKPGKETFTGLPQLQMFDIGKRERRPTQSNLNEGALLKRM--AVDGKIGNRGKHMKLPK---QLRLPRIDDVWTFYDRERLRELQKMEEDRYREL---------------KNNDALPSDPAEWEL-----LTPVLAEE----KARLLSEGFGDWSRNHFNLFCRASAKYGR-TSYEKIAGEIGKTEEEVQRYAEVFW-RKGEEVLSDGEWKKVVTAIEKGEKKLEEIARLTKATQELLSRFKNPWEELSFHYIGQQGKERIYSTEEDRYLLCFTNHYGYGNWEDVRMAIRRCDRFRFDYFLRSCTADNLGKRCEQLMRAAEKENIEYEKKRLAVEDGRRREKEDRSVEDA------------RRIKDD--------EERKARITELDAKLGEEEGRLQEFADAKKAAEM 397
E+ EKLKAADKGDLLDF++DG SVQ FEG DYS ++ G+ FD+GKRER+ ++N NE +L +R A+ G I + K K K LRLPR+++ W YDR RL ++Q+ EED ++ L + +D+L P E L P+L+ E K +LL EGF DW R+ F F + SAK+GR + KIA E+ K+E+ V+ + + FW G+ +S+ E+ +VV IE+GEKK+EEI L + T+ L+S F NPW+EL F +I K+++++ +EDRYLLC+ YGYG W+ +++AIRR FRFDYFLRS + +G+RCEQLM+AAEKE + E+K ED + D+S E A +RI+ + +E K ++ +L A++G + RL+E + A +
Sbjct: 821 EMNEKLKAADKGDLLDFKLDGS-SVQTFEGVDYSLAQARKEMLGI-----FDLGKRERK--EANYNENSLYQRQVAAMQGNITQKPKKKKALKLPKHLRLPRMEE-WQMYDRPRLLKIQEEEEDAFKSLPEEQQKMALNEHSKSEQSDSLEDAPIGDEEKIPFELPPLLSTERQAEKDQLLLEGFSDWKRHDFATFIKLSAKFGRENALSKIALELSKSEQAVKEFTDAFWGDIGKSRISEHEYDRVVKLIERGEKKIEEIKGLERGTKILVSLFDNPWKELEFTHIN--CKDKMFTVDEDRYLLCWARKYGYGQWQAIKLAIRRNPLFRFDYFLRSLPVEQIGRRCEQLMKAAEKEVEQLERK--YREDNGFPTEPDQSGELAPVQLPKHRVLLRQRIQKERMEAELHQQELKKKVDDLSAQIGNLQKRLKELNEGAAVARV 1250 The following BLAST results are available for this feature:
BLAST of EWM24021.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|