EWM24043.1, cds6629 (CDS) Nannochloropsis gaditana

Overview
NameEWM24043.1
Unique Namecds6629
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:162575..165301 +
Alignment locationCM002469.1:165441..165623 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24043.1
Productpotassium channel modulatory factor 1
Orig transcript idgnl|cribi|Naga_100280g7.2292.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:162575..165301 +
CM002469.1supercontigCM002469.1:165441..165623 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR002083MATH
IPR000433Znf_ZZ
IPR001810F-box_dom
Homology
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|585105334|gb|EWM24043.1| (potassium channel modulatory factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 2019.97 bits (5232), Expect = 0.000e+0
Identity = 969/969 (100.00%), Postives = 969/969 (100.00%), Query Frame = 0
Query:    1 MDNLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 969
            MDNLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR
Sbjct:    1 MDNLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 969          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|553185624|ref|XP_005854280.1| (potassium channel modulatory factor 1 [Nannochloropsis gaditana CCMP526] >gi|422294785|gb|EKU22085.1| potassium channel modulatory factor 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1895.17 bits (4908), Expect = 0.000e+0
Identity = 910/911 (99.89%), Postives = 911/911 (100.00%), Query Frame = 0
Query:   59 MPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 969
            MPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSP+MHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR
Sbjct:    1 MPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPDMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 911          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|298705855|emb|CBJ29000.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 175.637 bits (444), Expect = 3.119e-41
Identity = 142/463 (30.67%), Postives = 195/463 (42.12%), Query Frame = 0
Query:    3 NLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYD-------IMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSN---------------PERRYSPSFRVEDYTFKVIVDPVGNPNVYF---------LEPGVSVYL--ACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIM-------------------------------DTGAEAPAGADDS----------------------LTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAG 379
             +P+++L     FLDG  LL+C  V   + + TD    W+ A    FPHL++ Y           Y GD++  F D NR NRS V +W +                      ERRY P F +  Y F ++ DP GNP             +E G+SVYL  A    AP  P          +   G P PP    LV  P  +E    A A A +  P GL              +   H G   +     ECC AFSL A  +    + V W SSM  DRF   R++WGVH L+P+ K++DP  GFV D  L +++R RLL+L + V   A LA+H GFG++                               DT   A  G+D                        +T+E+  CTTL   + ++AR LG+   E  RLWV +QP+ D  L PR++L+  G
Sbjct:   30 TVPVEVLDTVFEFLDGNGLLSCEAVSYCWRRATDRAHLWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYRETFLDGNRGNRSTVLDWNMEAVTGGAADGADGMEGGDPEQSERRYFPPFSLCGYLFMLLADPTGNPRAASQAEAAGAPPVEKGLSVYLTVAFHDDAPGTPPWGVGGVAGGASFEGFP-PPPQHLLVGQPWGAEEAGGARAEAKSD-PHGLRRRRRRARTREGRAAIVSHAGDPAAIAR--ECCTAFSLAAV-KTAGDKGVVWVSSMEGDRFWLGRRSWGVHCLIPMGKVQDPEQGFVKDGRLTVRLRARLLFLFLHVYTTADLASHRGFGVVPVRGRDRRFHFYGNDGTEQEEEQETSRNHPRDTPPAAATGSDGRSSPGGKKRNTSTPAKGGGPLPCITFEVLRCTTLEEVEGLIARTLGVER-EGIRLWVISQPFTDGPLAPRQLLSGKG 486          

HSP 2 Score: 128.257 bits (321), Expect = 2.023e-26
Identity = 54/117 (46.15%), Postives = 72/117 (61.54%), Query Frame = 0
Query:  844 LKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQ-AAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVP 959
            +K+ +VV + E  GYQ FR R  Y Q +H+N R+T++Y+ QGR L F CD CG  DFTGPRY C  C DYDLC  C    + A  HRY + +  W+RE  F  H+ +H ++ I  VP
Sbjct:  896 IKMAEVVEICESLGYQGFRTRIAYDQQRHVNPRETLEYIAQGRQLAFICDSCGTQDFTGPRYHCLACPDYDLCHQCNAKKEPAPRHRYLFANGHWKREAGFQGHTDDHELEEIFTVP 1012          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|553195120|ref|XP_005856087.1| (ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526] >gi|422292972|gb|EKU20273.1| ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 155.606 bits (392), Expect = 2.111e-36
Identity = 109/319 (34.17%), Postives = 161/319 (50.47%), Query Frame = 0
Query:    4 LPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEAL-VQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDD-ALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPA 320
            LP  ++   LSFL+G  L  CA VC +  +  D+   WE A    +PH ++      Y+G+WK L +DRNRR+RS +FEW VTD L N  RR+SP+F +  Y+F++IVDP GNP V   +PGVSVYL CSP       T     LA S    + + P A+ +   NP  S A      A A                                          F+L   NQ    R++ W S++L+DRF  + + WGVH L+ + +L+D A+G++ +  ++K++  LRL  L++KV  +  +  + GFG+ +  A APA
Sbjct:   35 LPTAVIHLVLSFLNGRELCICAQVCCELYECCDYPPLWEGAGRAAYPHAEKLGTTNLYSGEWKTLLRDRNRRDRSVLFEWEVTDCLRNTNRRFSPTFTLGAYSFQLIVDPSGNPYVPLAKPGVSVYLTCSP-------TQYMRGLAPS--GRMCVDPAADEMPYLNPADSRAEDVWECAVA------------------------------------------FTLAIVNQTGARRDLPWSSNLLHDRFRPHCREWGVHRLVSLRRLQDSANGYLSETGSIKVEACLRLACLSLKVFTSDGMREYAGFGLANVHAPAPA 302          

HSP 2 Score: 65.4698 bits (158), Expect = 3.075e-7
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  319 PAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREIL 375
            PA       YE+F C T+ AF+ +LA+DL + SP H RLW+ TQPW D+   PRE++
Sbjct:  420 PASTTPFWGYEVFQCMTVAAFRAILAKDLNLSSPNHLRLWIVTQPWADSPAAPRELI 476          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|585102122|gb|EWM21786.1| (ubiquitin carboxyl-terminal hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 157.147 bits (396), Expect = 2.140e-35
Identity = 109/319 (34.17%), Postives = 161/319 (50.47%), Query Frame = 0
Query:    4 LPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEAL-VQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDD-ALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPA 320
            LP  ++   LSFL+G  L  CA VC +  +  D+   WE A    +PH ++      Y+G+WK L +DRNRR+RS +FEW VTD L N  RR+SP+F +  Y+F++IVDP GNP V   +PGVSVYL CSP       T     LA S    + + P A+ +   NP  S A      A A                                          F+L   NQ    R++ W S++L+DRF  + + WGVH L+ + +L+D A+G++ +  ++K++  LRL  L++KV  +  +  + GFG+ +  A APA
Sbjct:   42 LPTAVIHLVLSFLNGRELCICAQVCCELYECCDYPPLWEGAGRAAYPHAEKLGTTNLYSGEWKTLLRDRNRRDRSVLFEWEVTDCLRNTNRRFSPTFTLGAYSFQLIVDPSGNPYVPLAKPGVSVYLTCSP-------TQYMRGLAPS--GRMCVDPAADEMPYLNPADSRAEDVWECAVA------------------------------------------FTLAIVNQTGARRDLPWSSNLLHDRFRPHCREWGVHRLVSLRRLQDSANGYLSETGSIKVEACLRLACLSLKVFTSDGMREYAGFGLANVHAPAPA 309          

HSP 2 Score: 148.673 bits (374), Expect = 1.068e-32
Identity = 71/135 (52.59%), Postives = 87/135 (64.44%), Query Frame = 0
Query:  831 RVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSL 965
            R+RPR        L LE VV+LFE+ G Q FRVRN +++ +H  ARQT+DY   GRHLGFCCDRCG  DFTGPRYKCC C D+DLC  C   P    HRY+++ R W RE +FS H+  H M  + P+P  L  L
Sbjct:  992 RLRPR--------LTLETVVDLFEKVGNQRFRVRNTFFEQEHTVARQTLDYGY-GRHLGFCCDRCGELDFTGPRYKCCACQDFDLCHDCHLLP-VEGHRYRFKGRSWARE-EFSGHTDAHAMVCLQPIPSTLAML 1115          

HSP 3 Score: 69.707 bits (169), Expect = 2.132e-8
Identity = 51/158 (32.28%), Postives = 65/158 (41.14%), Query Frame = 0
Query:  319 PAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGF 476
            PA       YE+F C T+ AF+ +LA+DL + SP H RLW+ TQPW D+   PRE++               P P   P +  + N  +L            PL+ L                       TL   L  HMD L   RVWAE A DGG 
Sbjct:  427 PASTTPFWGYEVFQCMTVAAFRAILAKDLNLSSPNHLRLWIVTQPWADSPAAPRELIRTV------------PLPDH-PALPDDFNYEEL------------PLSVL-------------------EEHQTLAMALGAHMDCLDEVRVWAEVAGDGGL 540          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|553195124|ref|XP_005856088.1| (ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526] >gi|422292973|gb|EKU20274.1| ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 149.058 bits (375), Expect = 7.296e-34
Identity = 71/135 (52.59%), Postives = 87/135 (64.44%), Query Frame = 0
Query:  831 RVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSL 965
            R+RPR        L LE VV+LFE+ G Q FRVRN +++ +H  ARQT+DY   GRHLGFCCDRCG  DFTGPRYKCC C D+DLC  C   P    HRY+++ R W RE+ FS H+  H M  + P+P  L  L
Sbjct:  447 RLRPR--------LTLETVVDLFEKVGNQRFRVRNTFFEQEHTVARQTLDYGY-GRHLGFCCDRCGELDFTGPRYKCCACQDFDLCHDCHLLP-VEGHRYRFKGRSWARED-FSGHTDAHAMVCLQPIPSTLAML 570          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|566020633|gb|ETI43544.1| (hypothetical protein, variant 5 [Phytophthora parasitica P1569] >gi|567957984|gb|ETK83578.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|568015985|gb|ETL90162.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|568046348|gb|ETM43457.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|570324223|gb|ETO72171.1| hypothetical protein, variant 5 [Phytophthora parasitica P1976] >gi|570948062|gb|ETP13319.1| hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1] >gi|570980850|gb|ETP41388.1| hypothetical protein, variant 5 [Phytophthora parasitica P10297])

HSP 1 Score: 112.464 bits (280), Expect = 4.603e-22
Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 0
Query:  828 SRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
            +R    P R  P      LEQV  L E+     FRVR+ + +  H +A  T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC       +HRY      W+R   F +H+  H M+ +LPV Y
Sbjct:  404 ARELFNPNRLVPP----TLEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 531          

HSP 2 Score: 82.4185 bits (202), Expect = 1.647e-12
Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 0
Query:  219 DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVD--------DALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTT----LTAFKEMLARDLGMPSPE-----HFRLWVFTQPWPD-TILCPREILT 376
            DW  C  FSL   N     R + WHS + +++FH++  NWGVHSL  +  L+DP  GF+          D L +  ++RL+ +T +VV    L  H   G++D    A          EL  C +    L A  +  +  LG  S E       R+W F QP      L PR++LT
Sbjct:   54 DWLTCAVFSLQVQNALDPRRRLEWHSCLTDNKFHQHLNNWGVHSLGSLNMLRDPQQGFLTSSTGDHTQPDTLTVSAQVRLMSITFRVVFEHDLRKHHQLGLVDFSNVA--------ELELPFCCSLRDLLVALHDQFSDVLGQYSEEDTATNKTRVWCFNQPVVSGQALRPRKLLT 221          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|567986673|gb|ETL36991.1| (hypothetical protein, variant 5 [Phytophthora parasitica])

HSP 1 Score: 112.464 bits (280), Expect = 4.728e-22
Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 0
Query:  828 SRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
            +R    P R  P      LEQV  L E+     FRVR+ + +  H +A  T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC       +HRY      W+R   F +H+  H M+ +LPV Y
Sbjct:  404 ARELFNPNRLVPP----TLEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 531          

HSP 2 Score: 80.8777 bits (198), Expect = 5.565e-12
Identity = 55/176 (31.25%), Postives = 79/176 (44.89%), Query Frame = 0
Query:  219 DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVD--------DALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTT----LTAFKEMLARDLGMPSPE-----HFRLWVFTQPWPD-TILCPREILT 376
            DW  C  FSL   N     R + WHS + +++FH++  NWGVHSL  +  L+DP  GF+          D L +  ++RL+ +T +VV    L  H   G++D    A          EL  C +    L A  +  +  LG  S E       R+W F QP      L PR++L 
Sbjct:   54 DWLTCAVFSLQVQNALDPRRRLEWHSCLTDNKFHQHLNNWGVHSLGSLNMLRDPQQGFLTSSTGDHTQPDTLTVSAQVRLMSITFRVVFEHDLRKHHQLGLVDFSNVA--------ELELPFCCSLRDLLVALHDQFSDVLGQYSEEDTATNKTRVWCFNQPVVSGQALRPRKLLI 221          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|675197503|ref|XP_008907636.1| (hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >gi|568092451|gb|ETN07260.1| hypothetical protein, variant 5 [Phytophthora parasitica INRA-310])

HSP 1 Score: 112.464 bits (280), Expect = 5.033e-22
Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 0
Query:  828 SRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
            +R    P R  P      LEQV  L E+     FRVR+ + +  H +A  T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC       +HRY      W+R   F +H+  H M+ +LPV Y
Sbjct:  404 ARELFNPNRLVPP----TLEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 531          

HSP 2 Score: 82.4185 bits (202), Expect = 1.720e-12
Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 0
Query:  219 DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVD--------DALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTT----LTAFKEMLARDLGMPSPE-----HFRLWVFTQPWPD-TILCPREILT 376
            DW  C  FSL   N     R + WHS + +++FH++  NWGVHSL  +  L+DP  GF+          D L +  ++RL+ +T +VV    L  H   G++D    A          EL  C +    L A  +  +  LG  S E       R+W F QP      L PR++LT
Sbjct:   54 DWLTCAVFSLQVQNALDPRRRLEWHSCLTDNKFHQHLNNWGVHSLGSLNMLRDPQQGFLTSSTGDHTQPDTLTVSAQVRLMSITFRVVFEHDLRKHHQLGLVDFSNVA--------ELELPFCCSLRDLLVALHDQFSDVLGQYSEEDTATNKTRVWCFNQPVVSGQALRPRKLLT 221          
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|567986670|gb|ETL36988.1| (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 112.849 bits (281), Expect = 6.760e-22
Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 0
Query:  846 LEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
            LEQV  L E+     FRVR+ + +  H +A  T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC       +HRY      W+R   F +H+  H M+ +LPV Y
Sbjct:  576 LEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 689          
The following BLAST results are available for this feature:
BLAST of EWM24043.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105334|gb|EWM24043.1|0.000e+0100.00potassium channel modulatory factor 1 [Nannochloro... [more]
gi|553185624|ref|XP_005854280.1|0.000e+099.89potassium channel modulatory factor 1 [Nannochloro... [more]
gi|298705855|emb|CBJ29000.1|3.119e-4130.67conserved unknown protein [Ectocarpus siliculosus][more]
gi|553195120|ref|XP_005856087.1|2.111e-3634.17ubiquitin carboxyl-terminal hydrolase and or f-box... [more]
gi|585102122|gb|EWM21786.1|2.140e-3534.17ubiquitin carboxyl-terminal hydrolase [Nannochloro... [more]
gi|553195124|ref|XP_005856088.1|7.296e-3452.59ubiquitin carboxyl-terminal hydrolase and or f-box... [more]
gi|566020633|gb|ETI43544.1|4.603e-2242.11hypothetical protein, variant 5 [Phytophthora para... [more]
gi|567986673|gb|ETL36991.1|4.728e-2242.11hypothetical protein, variant 5 [Phytophthora para... [more]
gi|675197503|ref|XP_008907636.1|5.033e-2242.11hypothetical protein, variant 5 [Phytophthora para... [more]
gi|567986670|gb|ETL36988.1|6.760e-2245.22hypothetical protein, variant 2 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6645rna6645Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications