EWM24043.1, cds6629 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|585105334|gb|EWM24043.1| (potassium channel modulatory factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 2019.97 bits (5232), Expect = 0.000e+0 Identity = 969/969 (100.00%), Postives = 969/969 (100.00%), Query Frame = 0
Query: 1 MDNLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 969
MDNLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR
Sbjct: 1 MDNLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 969
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|553185624|ref|XP_005854280.1| (potassium channel modulatory factor 1 [Nannochloropsis gaditana CCMP526] >gi|422294785|gb|EKU22085.1| potassium channel modulatory factor 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1895.17 bits (4908), Expect = 0.000e+0 Identity = 910/911 (99.89%), Postives = 911/911 (100.00%), Query Frame = 0
Query: 59 MPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPNMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 969
MPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSP+MHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR
Sbjct: 1 MPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGFASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAHQTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPDMHVLVFLKWMNPVSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHRPPETLGAHMETTPATWQRCGQGMHRMIACPLPAQHLRGVARPRDNNRERPEEQATLRDIGVENGQILTFYVEGMEAVVEGTYRGYLEELFHEACVMYYGQDSLQAAERARSLMCMDVEDEMVEEDCSQQYVGKSSSAGDQKNERMGKTGPSRGNTKKGVTAAGATTEDREGTAGALACFLAPPALANAALFSSRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSLSLQR 911
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|298705855|emb|CBJ29000.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 175.637 bits (444), Expect = 3.119e-41 Identity = 142/463 (30.67%), Postives = 195/463 (42.12%), Query Frame = 0
Query: 3 NLPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYD-------IMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSN---------------PERRYSPSFRVEDYTFKVIVDPVGNPNVYF---------LEPGVSVYL--ACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIM-------------------------------DTGAEAPAGADDS----------------------LTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAG 379
+P+++L FLDG LL+C V + + TD W+ A FPHL++ Y Y GD++ F D NR NRS V +W + ERRY P F + Y F ++ DP GNP +E G+SVYL A AP P + G P PP LV P +E A A A + P GL + H G + ECC AFSL A + + V W SSM DRF R++WGVH L+P+ K++DP GFV D L +++R RLL+L + V A LA+H GFG++ DT A G+D +T+E+ CTTL + ++AR LG+ E RLWV +QP+ D L PR++L+ G
Sbjct: 30 TVPVEVLDTVFEFLDGNGLLSCEAVSYCWRRATDRAHLWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYRETFLDGNRGNRSTVLDWNMEAVTGGAADGADGMEGGDPEQSERRYFPPFSLCGYLFMLLADPTGNPRAASQAEAAGAPPVEKGLSVYLTVAFHDDAPGTPPWGVGGVAGGASFEGFP-PPPQHLLVGQPWGAEEAGGARAEAKSD-PHGLRRRRRRARTREGRAAIVSHAGDPAAIAR--ECCTAFSLAAV-KTAGDKGVVWVSSMEGDRFWLGRRSWGVHCLIPMGKVQDPEQGFVKDGRLTVRLRARLLFLFLHVYTTADLASHRGFGVVPVRGRDRRFHFYGNDGTEQEEEQETSRNHPRDTPPAAATGSDGRSSPGGKKRNTSTPAKGGGPLPCITFEVLRCTTLEEVEGLIARTLGVER-EGIRLWVISQPFTDGPLAPRQLLSGKG 486 HSP 2 Score: 128.257 bits (321), Expect = 2.023e-26 Identity = 54/117 (46.15%), Postives = 72/117 (61.54%), Query Frame = 0
Query: 844 LKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQ-AAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVP 959
+K+ +VV + E GYQ FR R Y Q +H+N R+T++Y+ QGR L F CD CG DFTGPRY C C DYDLC C + A HRY + + W+RE F H+ +H ++ I VP
Sbjct: 896 IKMAEVVEICESLGYQGFRTRIAYDQQRHVNPRETLEYIAQGRQLAFICDSCGTQDFTGPRYHCLACPDYDLCHQCNAKKEPAPRHRYLFANGHWKREAGFQGHTDDHELEEIFTVP 1012
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|553195120|ref|XP_005856087.1| (ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526] >gi|422292972|gb|EKU20273.1| ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 155.606 bits (392), Expect = 2.111e-36 Identity = 109/319 (34.17%), Postives = 161/319 (50.47%), Query Frame = 0
Query: 4 LPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEAL-VQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDD-ALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPA 320
LP ++ LSFL+G L CA VC + + D+ WE A +PH ++ Y+G+WK L +DRNRR+RS +FEW VTD L N RR+SP+F + Y+F++IVDP GNP V +PGVSVYL CSP T LA S + + P A+ + NP S A A A F+L NQ R++ W S++L+DRF + + WGVH L+ + +L+D A+G++ + ++K++ LRL L++KV + + + GFG+ + A APA
Sbjct: 35 LPTAVIHLVLSFLNGRELCICAQVCCELYECCDYPPLWEGAGRAAYPHAEKLGTTNLYSGEWKTLLRDRNRRDRSVLFEWEVTDCLRNTNRRFSPTFTLGAYSFQLIVDPSGNPYVPLAKPGVSVYLTCSP-------TQYMRGLAPS--GRMCVDPAADEMPYLNPADSRAEDVWECAVA------------------------------------------FTLAIVNQTGARRDLPWSSNLLHDRFRPHCREWGVHRLVSLRRLQDSANGYLSETGSIKVEACLRLACLSLKVFTSDGMREYAGFGLANVHAPAPA 302 HSP 2 Score: 65.4698 bits (158), Expect = 3.075e-7 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query: 319 PAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREIL 375
PA YE+F C T+ AF+ +LA+DL + SP H RLW+ TQPW D+ PRE++
Sbjct: 420 PASTTPFWGYEVFQCMTVAAFRAILAKDLNLSSPNHLRLWIVTQPWADSPAAPRELI 476
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|585102122|gb|EWM21786.1| (ubiquitin carboxyl-terminal hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 157.147 bits (396), Expect = 2.140e-35 Identity = 109/319 (34.17%), Postives = 161/319 (50.47%), Query Frame = 0
Query: 4 LPLDLLSRTLSFLDGESLLTCACVCKDFCQLTDHRSYWENAAWRLFPHLKETYDIMPYNGDWKALFQDRNRRNRSAVFEWTVTDFLSNPERRYSPSFRVEDYTFKVIVDPVGNPNVYFLEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEAL-VQNPGFSEAVAAATAAAATGMPTGLNPNHHMEAAAMAALSGYGHGGGIGSPPGDWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDD-ALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPA 320
LP ++ LSFL+G L CA VC + + D+ WE A +PH ++ Y+G+WK L +DRNRR+RS +FEW VTD L N RR+SP+F + Y+F++IVDP GNP V +PGVSVYL CSP T LA S + + P A+ + NP S A A A F+L NQ R++ W S++L+DRF + + WGVH L+ + +L+D A+G++ + ++K++ LRL L++KV + + + GFG+ + A APA
Sbjct: 42 LPTAVIHLVLSFLNGRELCICAQVCCELYECCDYPPLWEGAGRAAYPHAEKLGTTNLYSGEWKTLLRDRNRRDRSVLFEWEVTDCLRNTNRRFSPTFTLGAYSFQLIVDPSGNPYVPLAKPGVSVYLTCSP-------TQYMRGLAPS--GRMCVDPAADEMPYLNPADSRAEDVWECAVA------------------------------------------FTLAIVNQTGARRDLPWSSNLLHDRFRPHCREWGVHRLVSLRRLQDSANGYLSETGSIKVEACLRLACLSLKVFTSDGMREYAGFGLANVHAPAPA 309 HSP 2 Score: 148.673 bits (374), Expect = 1.068e-32 Identity = 71/135 (52.59%), Postives = 87/135 (64.44%), Query Frame = 0
Query: 831 RVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSL 965
R+RPR L LE VV+LFE+ G Q FRVRN +++ +H ARQT+DY GRHLGFCCDRCG DFTGPRYKCC C D+DLC C P HRY+++ R W RE +FS H+ H M + P+P L L
Sbjct: 992 RLRPR--------LTLETVVDLFEKVGNQRFRVRNTFFEQEHTVARQTLDYGY-GRHLGFCCDRCGELDFTGPRYKCCACQDFDLCHDCHLLP-VEGHRYRFKGRSWARE-EFSGHTDAHAMVCLQPIPSTLAML 1115 HSP 3 Score: 69.707 bits (169), Expect = 2.132e-8 Identity = 51/158 (32.28%), Postives = 65/158 (41.14%), Query Frame = 0
Query: 319 PAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAPLAPVPPTVPAPPAAPLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGF 476
PA YE+F C T+ AF+ +LA+DL + SP H RLW+ TQPW D+ PRE++ P P P + + N +L PL+ L TL L HMD L RVWAE A DGG
Sbjct: 427 PASTTPFWGYEVFQCMTVAAFRAILAKDLNLSSPNHLRLWIVTQPWADSPAAPRELIRTV------------PLPDH-PALPDDFNYEEL------------PLSVL-------------------EEHQTLAMALGAHMDCLDEVRVWAEVAGDGGL 540
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|553195124|ref|XP_005856088.1| (ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526] >gi|422292973|gb|EKU20274.1| ubiquitin carboxyl-terminal hydrolase and or f-box, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.058 bits (375), Expect = 7.296e-34 Identity = 71/135 (52.59%), Postives = 87/135 (64.44%), Query Frame = 0
Query: 831 RVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPYNLRSL 965
R+RPR L LE VV+LFE+ G Q FRVRN +++ +H ARQT+DY GRHLGFCCDRCG DFTGPRYKCC C D+DLC C P HRY+++ R W RE+ FS H+ H M + P+P L L
Sbjct: 447 RLRPR--------LTLETVVDLFEKVGNQRFRVRNTFFEQEHTVARQTLDYGY-GRHLGFCCDRCGELDFTGPRYKCCACQDFDLCHDCHLLP-VEGHRYRFKGRSWARED-FSGHTDAHAMVCLQPIPSTLAML 570
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|566020633|gb|ETI43544.1| (hypothetical protein, variant 5 [Phytophthora parasitica P1569] >gi|567957984|gb|ETK83578.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|568015985|gb|ETL90162.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|568046348|gb|ETM43457.1| hypothetical protein, variant 5 [Phytophthora parasitica] >gi|570324223|gb|ETO72171.1| hypothetical protein, variant 5 [Phytophthora parasitica P1976] >gi|570948062|gb|ETP13319.1| hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1] >gi|570980850|gb|ETP41388.1| hypothetical protein, variant 5 [Phytophthora parasitica P10297]) HSP 1 Score: 112.464 bits (280), Expect = 4.603e-22 Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 828 SRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
+R P R P LEQV L E+ FRVR+ + + H +A T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC +HRY W+R F +H+ H M+ +LPV Y
Sbjct: 404 ARELFNPNRLVPP----TLEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 531 HSP 2 Score: 82.4185 bits (202), Expect = 1.647e-12 Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 0
Query: 219 DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVD--------DALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTT----LTAFKEMLARDLGMPSPE-----HFRLWVFTQPWPD-TILCPREILT 376
DW C FSL N R + WHS + +++FH++ NWGVHSL + L+DP GF+ D L + ++RL+ +T +VV L H G++D A EL C + L A + + LG S E R+W F QP L PR++LT
Sbjct: 54 DWLTCAVFSLQVQNALDPRRRLEWHSCLTDNKFHQHLNNWGVHSLGSLNMLRDPQQGFLTSSTGDHTQPDTLTVSAQVRLMSITFRVVFEHDLRKHHQLGLVDFSNVA--------ELELPFCCSLRDLLVALHDQFSDVLGQYSEEDTATNKTRVWCFNQPVVSGQALRPRKLLT 221
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|567986673|gb|ETL36991.1| (hypothetical protein, variant 5 [Phytophthora parasitica]) HSP 1 Score: 112.464 bits (280), Expect = 4.728e-22 Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 828 SRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
+R P R P LEQV L E+ FRVR+ + + H +A T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC +HRY W+R F +H+ H M+ +LPV Y
Sbjct: 404 ARELFNPNRLVPP----TLEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 531 HSP 2 Score: 80.8777 bits (198), Expect = 5.565e-12 Identity = 55/176 (31.25%), Postives = 79/176 (44.89%), Query Frame = 0
Query: 219 DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVD--------DALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTT----LTAFKEMLARDLGMPSPE-----HFRLWVFTQPWPD-TILCPREILT 376
DW C FSL N R + WHS + +++FH++ NWGVHSL + L+DP GF+ D L + ++RL+ +T +VV L H G++D A EL C + L A + + LG S E R+W F QP L PR++L
Sbjct: 54 DWLTCAVFSLQVQNALDPRRRLEWHSCLTDNKFHQHLNNWGVHSLGSLNMLRDPQQGFLTSSTGDHTQPDTLTVSAQVRLMSITFRVVFEHDLRKHHQLGLVDFSNVA--------ELELPFCCSLRDLLVALHDQFSDVLGQYSEEDTATNKTRVWCFNQPVVSGQALRPRKLLI 221
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|675197503|ref|XP_008907636.1| (hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >gi|568092451|gb|ETN07260.1| hypothetical protein, variant 5 [Phytophthora parasitica INRA-310]) HSP 1 Score: 112.464 bits (280), Expect = 5.033e-22 Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 828 SRPRVRPRRASPKYSTLKLEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
+R P R P LEQV L E+ FRVR+ + + H +A T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC +HRY W+R F +H+ H M+ +LPV Y
Sbjct: 404 ARELFNPNRLVPP----TLEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 531 HSP 2 Score: 82.4185 bits (202), Expect = 1.720e-12 Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 0
Query: 219 DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVD--------DALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDTGAEAPAGADDSLTYELFHCTT----LTAFKEMLARDLGMPSPE-----HFRLWVFTQPWPD-TILCPREILT 376
DW C FSL N R + WHS + +++FH++ NWGVHSL + L+DP GF+ D L + ++RL+ +T +VV L H G++D A EL C + L A + + LG S E R+W F QP L PR++LT
Sbjct: 54 DWLTCAVFSLQVQNALDPRRRLEWHSCLTDNKFHQHLNNWGVHSLGSLNMLRDPQQGFLTSSTGDHTQPDTLTVSAQVRLMSITFRVVFEHDLRKHHQLGLVDFSNVA--------ELELPFCCSLRDLLVALHDQFSDVLGQYSEEDTATNKTRVWCFNQPVVSGQALRPRKLLT 221
BLAST of EWM24043.1 vs. NCBI_GenBank
Match: gi|567986670|gb|ETL36988.1| (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 112.849 bits (281), Expect = 6.760e-22 Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 0
Query: 846 LEQVVNLFERFGYQSFRVRNVYYQHKHMNARQTMDYVIQGRHLGFCCDRCGATDFTGPRYKCCMCYDYDLCGSCQEHPQAAAHRYKYEHRGWRRENQFSEHSKNHRMQMILPVPY 960
LEQV L E+ FRVR+ + + H +A T+ Y+++GRHLGF CD CG TDFTG R+ C +C DYDLC SC +HRY W+R F +H+ H M+ +LPV Y
Sbjct: 576 LEQVEKLAEKLDIPKFRVRSAF-RRCHEDALATLRYIMEGRHLGFICDSCGETDFTGARFNCAVCNDYDLCASCNVQSCEISHRYANVDGKWQRVYNFKDHNTKHTMRKMLPVFY 689 The following BLAST results are available for this feature:
BLAST of EWM24043.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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