EWM24078.1, cds6595 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|585105371|gb|EWM24078.1| (ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i [Nannochloropsis gaditana]) HSP 1 Score: 1327.77 bits (3435), Expect = 0.000e+0 Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0
Query: 1 MASTSRPPARKRRNTHAAASPGSTRTVAALFYTAACTSITVVSFSLLHTTHAFVYLPRRDHRLTSTLPSQWDLGRCSSNHDGRPGMPKWRGHTRDMLVRTATSKKSSAEAPEERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLLNLRSGKRKLRPEEE 647
MASTSRPPARKRRNTHAAASPGSTRTVAALFYTAACTSITVVSFSLLHTTHAFVYLPRRDHRLTSTLPSQWDLGRCSSNHDGRPGMPKWRGHTRDMLVRTATSKKSSAEAPEERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLLNLRSGKRKLRPEEE
Sbjct: 1 MASTSRPPARKRRNTHAAASPGSTRTVAALFYTAACTSITVVSFSLLHTTHAFVYLPRRDHRLTSTLPSQWDLGRCSSNHDGRPGMPKWRGHTRDMLVRTATSKKSSAEAPEERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLLNLRSGKRKLRPEEE 647
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|553194950|ref|XP_005856061.1| (ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i [Nannochloropsis gaditana CCMP526] >gi|422293007|gb|EKU20308.1| ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 744.962 bits (1922), Expect = 0.000e+0 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
Query: 96 MLVRTATSKKSSAEAPEERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKM 459
MLVRTATSKKSSAEAPEERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKM
Sbjct: 1 MLVRTATSKKSSAEAPEERDWKQALLEDDDLDIDAIIAANKETLPRLPGILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKM 364
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|298706765|emb|CBJ29688.1| (putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Ectocarpus siliculosus]) HSP 1 Score: 429.483 bits (1103), Expect = 1.256e-140 Identity = 226/474 (47.68%), Postives = 310/474 (65.40%), Query Frame = 0
Query: 164 EAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDG-ALPADINEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLLNLR 636
EA+ E G+ PL KM GLGG +D + +N L W+GENGVW+ DKS WGV PH L ++ T+DE E E +GRG+I I G+ LF LP+ +++ K+ + F + D++EY AIAL+ + E+A G SFW+ YI VLPT EEV PT +W E DLALLE SP++AAT S++RKL E+A +E + ++ V T+E + WAF +FSRAIR +GG +GE ++ + PYADL NHNPFAN+YI A + F+ + +EV+ +YAD+ YKKMEQVYISYGPK N+DLLLLYGF LDRNP+NSVD+TV+L +D L+E K+AFL++A +AFPL+ DRYP+EL +YLRL+ L + + GR L ++ F + NEL + S+ AC+ +A Y T EE D++L+ND +F KTQRMA+KHRR EK +L++T AAV + LR
Sbjct: 54 EALKGVADEPGL-PLGPSKKMSGLGGMVAED---SRVAENNALKEWMGENGVWVYDKSDWGVGPHALSVAVDTVDENENETAGRGMIANREIKEGDELFTLPIDLLLTKDAAKKEFGADVITEDLSEYIAIALLAVHEKAKGKESFWSSYIGVLPTVEEVYPTYLWAEEDLALLEGSPVIAATESMRRKLEVEYATVENDLLDKFPEILPREVHTYEEFQWAFAMLFSRAIR--LGGLS--TGE---AVALVPYADLFNHNPFANSYIDARQQGLFFS--KTDEVV-VYADRSYKKMEQVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTVSLDENDELYERKKAFLSEAGLPPTKAFPLYNDRYPDELLQYLRLIQLNTDQLRGRTLEDLSFEKKQTDVNELMVLDSLVEACKATIAGYPTTEEQDSKLMNDPGMFRALSKTQRMAVKHRRQEKVILRRTIAAVTKDKEKLR 513
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|219121061|ref|XP_002185762.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582611|gb|ACI65232.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 393.275 bits (1009), Expect = 6.643e-126 Identity = 219/471 (46.50%), Postives = 297/471 (63.06%), Query Frame = 0
Query: 183 KMQGLGGKGEDDEEKKKAQQNARLATWLGENG-VWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAF-DGALPADINEYFAIALMLIKERAL-GPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEF-ALL--EEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVAL---------------LPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQL 632
K++GL + D K A N L WL G V++ ++S WG PHPL +S+ T DEI E SGRGL+ + IN G+ L ++P+++ + K + A LP++INEY A+A LI ER + G S W PY+DVLP +EVNPT WP+ DLA L SP++AAT+SL+ KL E+ ALL E+ + D F F F+A+ WAF +FSRAIR++ S ++ E++ + PYADLINH+PF+ YI A + EEVI +YAD+ Y++MEQ+YISYGPKSNA+LLLLYGF ++RNPFNSVD+TV++ +P DPL EEK AFL Q R FP +ADRYP E+ EYLRL+ +T ED G+ L E +++ ISL NE A + S+ A L++Y EEDDA LI D LF + QRMA++HRR+EKRLLK+T AA+++QL
Sbjct: 64 KLKGLMPEKNDANPKFTA--NTNLIQWLTTEGNVYLSEESSWGEAPHPLAISTETKDEITNESSGRGLLARRDINDGDELLRIPMALCMTKSAARKAVGKDVLPSEINEYLAMACHLIYERNVRGEESPWKPYLDVLPDIDEVNPTFTWPDEDLAFLNGSPVIAATKSLQMKLRREYDALLGGEDGLLAKYPDRFPAEAFNFKAWEWAFTMLFSRAIRLR-------SLKQGETLALVPYADLINHSPFSQAYIDARQNGDWLFKSGDEEVI-LYADRGYRRMEQIYISYGPKSNAELLLLYGFAVERNPFNSVDVTVSIAPRTASFVKELDDDTIPVDPLAEEKAAFLEQVGRDATVDFPCYADRYPVEMLEYLRLMQMTPEDTRGKPLAEFDYSRTISLGNEAAVLTSVITAVSRQLSNYPQSEEDDAALIKDKSLFRLLSYNQRMAVRHRRNEKRLLKRTIAALEKQL 524
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|1072233443|gb|OEU18174.1| (ribulose-1,5-bisphosphate caboxylase, small subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 392.889 bits (1008), Expect = 1.378e-125 Identity = 224/510 (43.92%), Postives = 308/510 (60.39%), Query Frame = 0
Query: 145 ILNASPRDGNVDLPESFLDEAVASPKKEEGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGE-NGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAF-DGALPADINEYFAIALMLIKER-ALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALL---EEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVA-EKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVAL---------------LPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQL 632
IL AS G+ + ++ L+ A P G KM+GL GK K A NARL +WL E GV++ ++S WG PHP+ +S+ T DEI E SGRGL+ + IN G+ L ++P+ + + K + A LP++INEY A+A LI ER LG SF+ PYIDVLP TEEVNPT W + DL+ L SP++AAT+SL+ KL E+ L ++ F +T E + WAF +FSRAIR++ + +E E++ M PYADLINH+PF+ YI A E +F+ GEE + +YAD+ Y++MEQ+YISYG KSNA+LLLLYGF ++RNP+NSVD+TVA+ +P DPL EEK FLA R FP +ADRYP EL E+LRL+ +T +D G+ L + +++ IS NE A ++S+ A + Y EEDDA LI D +F + QRMAI+HRR+EKRLLK+T AA++ Q+
Sbjct: 43 ILMASGEGGDKEWAKALLESTAAIP------GVFEEEMKMKGLLGKKTGANPKLTA--NARLVSWLSEEGGVYLSEESTWGEAPHPMAISTETKDEITNESSGRGLLARRDINDGDNLLKVPIKLCLTKSSARTALGKDVLPSEINEYLAVACQLIHERYVLGDKSFFKPYIDVLPETEEVNPTFTWSDDDLSFLNGSPVIAATQSLQMKLQREYDSLLGGDDGLCNKYPSRFPIEHYTMENWTWAFAMLFSRAIRLR-------NLKEGETLAMVPYADLINHSPFSQAYIDAREDGDWLFSS--GEEEVILYADRGYRRMEQIYISYGQKSNAELLLLYGFAVERNPYNSVDVTVAIAPLTESFVKELNDDTIPVDPLAEEKVTFLASVGRESLVDFPCYADRYPVELLEFLRLMQMTPDDTRGKPLNDFDYSRTISAANEAAVLSSVIEAVTRQIDKYPNTEEDDAALIKDKGMFRLLSYNQRMAIRHRRNEKRLLKRTIAALENQM 535
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|1210522691|dbj|GAX18704.1| (hypothetical protein FisN_10Hh082 [Fistulifera solaris]) HSP 1 Score: 382.489 bits (981), Expect = 4.032e-122 Identity = 214/482 (44.40%), Postives = 296/482 (61.41%), Query Frame = 0
Query: 173 EGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENG-VWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAF-DGALPADINEYFAIALMLIKER-ALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEF-ALLE-EQYMRAR-SDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVAL---------------LPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLL 633
E + KM+GL G + K A NA L WL + G V++ ++S WG PHP+ +S+ T DEI E SGRGL+ + IN G+ L ++P+ + + K + A ALP++INEY AIA LI E+ + S+W PY+DVLPTT+EV+PT W + DLA L+ SP++AAT+SL+ KL E+ ALL + + AR D F FT E + WAF +FSRAIR++ + + E++ + PYADLINH+PF+ YI A + EEVI +YAD+ Y++MEQ+YISYGPKSNA+LLLLYGF ++RNPFNSVD+TV++ +P DPL EEK FL R FP +ADRYP E+ EYLRL+ +T +D G+ L +++ IS NE A + S+ A L Y EE+D LI D LF + QRMAI+HRR+EKRLLK+T AA+++Q++
Sbjct: 23 EAIETFEKEMKMKGLMKGGSQGDVKLSA--NANLIQWLSKEGDVYLSEQSSWGEAPHPMAISTDTKDEITNESSGRGLLARRDINDGDELLKIPMKMCMTKSNARKALGKDALPSEINEYLAIACHLIYEKFVMADQSYWKPYLDVLPTTDEVSPTFTWSDDDLAFLKGSPVIAATKSLQMKLKREYDALLGGDNGLIARFPDRFPKEHFTMENWTWAFTMLFSRAIRLR-------NLSQGETLALVPYADLINHSPFSQAYIDARQSGDWLFKSGDEEVI-LYADRGYRRMEQIYISYGPKSNAELLLLYGFAVERNPFNSVDVTVSIAPRTASFIKELNDENIPVDPLAEEKLQFLESVGRANTVDFPCYADRYPTEMLEYLRLMQMTPDDTRGKPLNAFDYSRTISPGNEAAVLTSVIEAVTRQLGKYPQTEEEDNALIKDKSLFRLLSYNQRMAIRHRRNEKRLLKRTIAALEKQII 494
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|873238704|emb|CEL95601.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 382.874 bits (982), Expect = 1.726e-121 Identity = 202/466 (43.35%), Postives = 291/466 (62.45%), Query Frame = 0
Query: 182 AKMQGLGGKGEDDEEKKKAQQNARLATWLGENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFDGALPAD-INEYFAIALMLIKERALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEFALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKPFKMFNPIRGEEVI----------TIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLLNLR 636
+K++GL G DD K QQN LA WL NGV++ +KS WG+ PH LL++ +DE E +GRGL+ K +++ + +PL + K+ + F + D ++E+ AIAL+LI ERA G SF+ PY+DVLPT EEVNPT VWPE D+ LL S SL+ KL E+ + + + ++F VFTFEA+LWAFI IFSR+IR+++G + +E E I M PYADLINH+PF++++I AE P RG+ + +Y D+ YK+MEQVY+SYG KSNADLLLLYGF LDRNP N+V L L P+D L+++K AF+ +A + FP+ D++P+E+FE++RL+ + K +G R L +FT P+S E + ++ C E L Y T + +D LI+D LF+M K+QRMA++ R EKR+LK+T AA+K + N++
Sbjct: 105 SKLRGLRGLTSDD---IKVQQNEALAGWLFANGVYLSEKSEWGLAPHACLLATDVMDENAGESAGRGLLAKKQLDVNEEVLSVPLRLCFTKDAARRVFGPDIVDDGMSEHIAIALLLIHERAKGDDSFFFPYLDVLPTIEEVNPTFVWPEEDVELLRGSQAFITATSLREKLLNEYDRVRSLVLTKKPEMFPEDVFTFEAWLWAFIQIFSRSIRLQLGKS---TSKEREEIAMVPYADLINHSPFSSSFITAESPSAFLKRWRGDPITEQVRVVDDDVKVYTDRAYKRMEQVYVSYGQKSNADLLLLYGFALDRNPHNTVSLDFQLDPNDELYDDKMAFVDKAGLPSRIFFPVGDDKFPSEMFEFVRLMVIDKATLGDRPLARFDFTRPLSEALENRVLDTVIEQCAEILQRYPTTDAEDEALISDRGLFSMMSKSQRMAVRMRFQEKRILKRTMAALKARRKNVK 564
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|1210523904|dbj|GAX17228.1| (hypothetical protein FisN_10Lh082 [Fistulifera solaris]) HSP 1 Score: 380.178 bits (975), Expect = 2.882e-121 Identity = 212/486 (43.62%), Postives = 294/486 (60.49%), Query Frame = 0
Query: 173 EGVGPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGENG-VWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAF-DGALPADINEYFAIALMLIKER-ALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEF-ALL--EEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVAEKP----FKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVAL---------------LPDDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLL 633
E + KM+GL G + K A NA L WL + G V++ ++S WG PHP+ +S+ T DEI E SGRGL+ + IN G+ L ++P+ + + K + A ALP++INEY AIA LI E+ + S+W PY+DVLPT EV+PT W E DLA LE SP++AAT+SL+ KL E+ ALL + + + F FT E + WAF +FSRAIR++ + + E++ + PYADLINH+PF+ YI A + FK G+E + +YAD+ Y++MEQ+YISYGPKSNA+LLLLYGF ++RNPFNSVD+TV++ +P DPL EEK FL R FP +ADRYP E+ EYLRL+ +T +D G+ L +++ IS NE A + S+ A L Y EE+D LI D LF + QRMAI+HRR+EKRLLK+T AA+++Q++
Sbjct: 23 EAIDTFEKEMKMKGLMKGGSQGDVKLSA--NANLVQWLSKEGDVYLSEQSSWGEAPHPMAISTDTKDEITNESSGRGLLARRDINDGDELLKIPMKMCMTKANARKALGKDALPSEINEYLAIACHLIFEKFVMADQSYWKPYLDVLPTVNEVSPTFTWSEDDLAFLEGSPVIAATKSLQMKLKREYDALLGGDNGLVAKFPERFPKEHFTLENWTWAFTMLFSRAIRLR-------NLSQGETLALVPYADLINHSPFSQAYIDARQSGDWLFK-----NGDEEVILYADRGYRRMEQIYISYGPKSNAELLLLYGFAVERNPFNSVDVTVSIAPRTTSFIKELNDENIPVDPLAEEKLQFLESVGRANTVDFPCYADRYPTEMLEYLRLMQMTPDDTRGKPLNAFDYSRTISPGNEAAVLTSVIEAVTRQLKKYPQTEEEDNALIKDKSLFRLLSYNQRMAIRHRRNEKRLLKRTIAALEKQII 494
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|397613505|gb|EJK62256.1| (hypothetical protein THAOC_17139 [Thalassiosira oceanica]) HSP 1 Score: 370.933 bits (951), Expect = 2.187e-116 Identity = 211/484 (43.60%), Postives = 294/484 (60.74%), Query Frame = 0
Query: 176 GPLVSRAKMQGLGGKGEDDEEKKKAQQNARLATWLGE-NGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAFD-GALPADINEYFAIALMLIKERAL-GPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEF--------ALLEEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVA-EKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLP-------------DDPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKTAAAVKQQLLN 634
G KM+GL G + K NARL +WL E GV++ + S WG PHPL +S+ T+DEI E SGRGL+ + IN G+ L ++PL + + ++ + AL INEY A+A LI E+ + G SF+A Y+ VLP +EVNPT WP+ DLA LE SP+VAATRSL+ KL E+ L+ + +R F +TFE + WAF +FSRAIR++ + + E + M PYADLINH+ F+ +I A E +F GEE + +YAD+ Y++MEQVYISYG KSNA+LLLLYGF L+RNP+NSVD+TV++ P +DPL +EK FL R + FP +ADRYP E+ EYLRL+ +T ED G+ L + +++ IS NE + + S+ A + L + EEDDA +I D +F +F QRMA++HRR+EKRLLK+T AA+++Q+ N
Sbjct: 135 GKFEEEMKMKGLLGPNRG-KGNTKLSANARLISWLEEEGGVYLAESSTWGEAPHPLAISTETVDEITNESSGRGLLARRSINDGDELLKIPLDLCLTRKSARRELGKDALQEGINEYLAVACQLIHEKFVKGEDSFYAAYMGVLPEVDEVNPTFTWPDEDLAFLEGSPVVAATRSLQMKLRREYDDLLGGPDGLVAKFPLR-----FPAEHYTFENWEWAFTMLFSRAIRLR-------NLQVGERLAMVPYADLINHSAFSQAFIDARESGDWLFKS--GEEEVILYADRGYRQMEQVYISYGQKSNAELLLLYGFALERNPYNSVDVTVSIAPRTKQIAEANEGVEEDPLADEKLEFLLSVGRDQTVDFPCYADRYPVEMLEYLRLMMMTPEDTRGKPLSDFDYSRTISSANEASVLRSVVAAVKYQLGLFPQTEEDDAAIIKDKGMFRLFSYNQRMAVRHRRNEKRLLKRTLAALEKQIRN 603
BLAST of EWM24078.1 vs. NCBI_GenBank
Match: gi|223992783|ref|XP_002286075.1| (rubisco small subunit small subunit n-methyltransferase, partial [Thalassiosira pseudonana CCMP1335] >gi|220977390|gb|EED95716.1| rubisco small subunit small subunit n-methyltransferase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 363.614 bits (932), Expect = 2.980e-116 Identity = 204/442 (46.15%), Postives = 277/442 (62.67%), Query Frame = 0
Query: 203 NARLATWL-GENGVWMQDKSGWGVPPHPLLLSSRTIDEIELEDSGRGLICKYPINMGNALFQLPLSIVIDKEKSLAAF-DGALPADINEYFAIALMLIKER-ALGPSSFWAPYIDVLPTTEEVNPTLVWPEGDLALLEASPLVAATRSLKRKLAAEF-ALL--EEQYMRARSDVFDPSVFTFEAYLWAFINIFSRAIRVKIGGKRGPSGEEEESIIMCPYADLINHNPFANTYIVA-EKPFKMFNPIRGEEVITIYADKDYKKMEQVYISYGPKSNADLLLLYGFCLDRNPFNSVDLTVALLPD-------------DPLFEEKRAFLAQAERREKEAFPLFADRYPNELFEYLRLVYLTKEDMGGRALREMEFTDPISLENELAAMASIEGACEEALASYSTKEEDDARLINDSKLFNMFPKTQRMAIKHRRSEKRLLKKT 624
N+RL WL E GV++ + S WG PHPL +S+ T+DEI E SGRGL+ + IN G+ L ++P+ + I ++ + A AL INEY AIA LI E+ LG S W Y+ VLP EEVNPT W + DLA L+ SP+VAATRSL+ KL E+ ALL ++ + D F FT+E ++WAF +FSRAIR++ + + E + M PYADLINH+ F+ +I A E +F GEE + +YAD+ Y++MEQVYISYG KSNA+LLLLYGF L+RNP+NSVD+TV++ P DPL +EK FLA R + FP +ADRYP E+ E+LRL+ +T ED G+ L + +++ IS NE A ++S+ A + L Y EEDDA +I D LF + QRMA++HRR+EKRLLK+T
Sbjct: 1 NSRLIAWLESEGGVYLAESSTWGEAPHPLAISTETVDEITNESSGRGLLARRSINDGDELLKIPMDLCITRKSARKALGKDALQDGINEYLAIACQLIHEKYVLGDESEWDAYMGVLPEVEEVNPTFTWKDEDLAFLDGSPVVAATRSLQMKLRREYDALLGGQDGLIAKFPDRFPAEHFTYENWVWAFTMLFSRAIRLR-------NLQVGERLAMVPYADLINHSAFSGAFIDARESGDWLFK--NGEEEVILYADRGYRQMEQVYISYGQKSNAELLLLYGFALERNPYNSVDVTVSIAPRTAALAAANEGIEVDPLAQEKVEFLASVGRDQTVDFPCYADRYPVEMLEFLRLMMMTPEDTRGKPLADFDYSRTISPANEAAVLSSVVEAVKYQLNLYPQSEEDDANIIKDKALFRLLSYNQRMAVRHRRNEKRLLKRT 433 The following BLAST results are available for this feature:
BLAST of EWM24078.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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