EWM24083.1, cds6590 (CDS) Nannochloropsis gaditana

Overview
NameEWM24083.1
Unique Namecds6590
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:59731..60453 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24083.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101316g1.2305.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:59731..60453 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24083.1 vs. NCBI_GenBank
Match: gi|585105382|gb|EWM24083.1| (hypothetical protein Naga_101316g1 [Nannochloropsis gaditana])

HSP 1 Score: 432.565 bits (1111), Expect = 1.747e-152
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0 
Query:    1 MGGREGGREGGGPGDFAGGLGDSDQSEEWRRASGVAGVAALGRRGGGGRGGGGGREGGREGGAGRGSAGGGGGGGGERRERAGDTSVGAENRGGGDGVGGGTAVPPSSATLPSLPEGAKDDKEGTPGKDTEGLAAPPPAYPQSFREILEMTERGETPPGIVTVDSRLSQDVGELGTLSVPASAEGMSTPPKKPWEAEKEEVGRGGEEGREEGSRAREGGTEGELEEERRLPAEGKQAYGV 240
            MGGREGGREGGGPGDFAGGLGDSDQSEEWRRASGVAGVAALGRRGGGGRGGGGGREGGREGGAGRGSAGGGGGGGGERRERAGDTSVGAENRGGGDGVGGGTAVPPSSATLPSLPEGAKDDKEGTPGKDTEGLAAPPPAYPQSFREILEMTERGETPPGIVTVDSRLSQDVGELGTLSVPASAEGMSTPPKKPWEAEKEEVGRGGEEGREEGSRAREGGTEGELEEERRLPAEGKQAYGV
Sbjct:    1 MGGREGGREGGGPGDFAGGLGDSDQSEEWRRASGVAGVAALGRRGGGGRGGGGGREGGREGGAGRGSAGGGGGGGGERRERAGDTSVGAENRGGGDGVGGGTAVPPSSATLPSLPEGAKDDKEGTPGKDTEGLAAPPPAYPQSFREILEMTERGETPPGIVTVDSRLSQDVGELGTLSVPASAEGMSTPPKKPWEAEKEEVGRGGEEGREEGSRAREGGTEGELEEERRLPAEGKQAYGV 240
The following BLAST results are available for this feature:
BLAST of EWM24083.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105382|gb|EWM24083.1|1.747e-152100.00hypothetical protein Naga_101316g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6606rna6606Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications