EWM24096.1, cds6577 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|585105414|gb|EWM24096.1| (2-oxoglutarate e1 subunit [Nannochloropsis gaditana]) HSP 1 Score: 449.514 bits (1155), Expect = 1.015e-159 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query: 1 MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLPALTYIGPPPLPTPAVGTREGHAEERERLLTTLWENVREGGAADRLDEA 224
MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLPALTYIGPPPLPTPAVGTREGHAEERERLLTTLWENVREGGAADRLDEA
Sbjct: 1 MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLPALTYIGPPPLPTPAVGTREGHAEERERLLTTLWENVREGGAADRLDEA 224
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|1051240679|gb|OCW83229.1| (hypothetical protein AKH18_02270 [Pelagibacteraceae bacterium GOM-A4]) HSP 1 Score: 149.443 bits (376), Expect = 1.280e-41 Identity = 79/214 (36.92%), Postives = 119/214 (55.61%), Query Frame = 0
Query: 4 LNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLP-------ALTYIGPPPLPTPAVGTREGHAEERERLLTTLWE 210
+NCTTPA YFHALRRQ+ R FRKPL++MTPK+LLR+ VS+L + +F VL KG +K +E + V+LC GKIY+D++ R+ L + ++L R+E+L PFP +L L P + + ++W QEEP N GAW + +++ +L A++YIG P TPA G H E++ ++ ++E
Sbjct: 1 MNCTTPANYFHALRRQMHRDFRKPLIIMTPKSLLRNKYCVSNLEDFSKKNSFHRVLWDHARDTKQKGFIKLKEDKK---------IRKVILCSGKIYFDLL---AAREKLKINDVILYRIEQLYPFPAKSLVKELKPF----AKNSKFYWCQEEPKNMGAWFAVRDYIQWTLETIKAKNNAISYIGRSPDATPATGYARRHNSEQQEIINKVFE 198
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|511001245|gb|EPB82733.1| (oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 158.303 bits (399), Expect = 6.833e-41 Identity = 91/207 (43.96%), Postives = 121/207 (58.45%), Query Frame = 0
Query: 2 HILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLP---ALTYIGPPPLPTPAVGTREGHAEERERLL 205
HI+NCTTPAQYFH LRRQ+LR +RKPL++M+PK+LL+ P AVSSL +M GT FQPVL +K E+ V+ GK YYD+VK+ + R LD ++ L+R+EELSPFP+ AL + S + W QEEP NAGA+AF++ L LP A+ Y+G PL PAVG ++ + LL
Sbjct: 744 HIVNCTTPAQYFHVLRRQMLRSYRKPLIVMSPKSLLKSPLAVSSLADMAPGTCFQPVLKD--------ASIKNDAQVEK-----------VVFLSGKFYYDLVKERQAR-GLD-DKVALIRIEELSPFPKDALVKEIEKY----SGAHEFVWCQEEPQNAGAYAFMAPRLAQLLPENKAIQYVGREPLSAPAVGISSVFKKQAQELL 925
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|758349869|dbj|GAN07911.1| (2-oxoglutarate dehydrogenase, E1 component [Mucor ambiguus]) HSP 1 Score: 156.762 bits (395), Expect = 2.522e-40 Identity = 90/207 (43.48%), Postives = 122/207 (58.94%), Query Frame = 0
Query: 2 HILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLP---ALTYIGPPPLPTPAVGTREGHAEERERLL 205
HI+NCTTPAQYFH LRRQ+LR +RKPL++++PK+LL+ P AVSSL +M GT FQPVL +K E+ V+ GK YYD+VK+ + R LD ++ L+R+EELSPFP+ ALA + + + W QEEP NAGA+AF++ L LP A+ Y+G PL PAVG ++ + LL
Sbjct: 754 HIVNCTTPAQYFHVLRRQMLRSYRKPLIVISPKSLLKSPLAVSSLADMAPGTCFQPVLKD--------ASIKNDAQVEK-----------VVFLSGKFYYDLVKERQTR-GLD-DKVALIRIEELSPFPKDALAKEIQKY----AGAREFVWCQEEPQNAGAYAFMAPRLAQLLPENKAIQYVGREPLSAPAVGISSVFKKQAQELL 935
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|1026275946|gb|OAD08929.1| (E1 component [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 155.606 bits (392), Expect = 7.525e-40 Identity = 89/207 (43.00%), Postives = 121/207 (58.45%), Query Frame = 0
Query: 2 HILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLP---ALTYIGPPPLPTPAVGTREGHAEERERLL 205
HI+NCTTPAQYFH LRRQ+LR +RKPL++++PK+LL+ P AVSSL +M GT FQPVL +K E+ V+ GK YYD+VK+ + R LD ++ L+R+EELSPFP+ ALA + + + W QEEP NAGA+AF++ L LP + Y+G PL PAVG ++ + LL
Sbjct: 754 HIVNCTTPAQYFHVLRRQMLRSYRKPLIVISPKSLLKSPLAVSSLADMAPGTCFQPVLKD--------ASIKNDAQVEK-----------VVFLSGKFYYDLVKERQAR-GLD-DKVALIRIEELSPFPKDALAKEIQKY----AGAHEFVWCQEEPQNAGAYAFMAPRLAQLLPENKGIQYVGREPLSAPAVGISSVFKKQAQELL 935
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|758361070|emb|CEP16470.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 154.066 bits (388), Expect = 2.056e-39 Identity = 90/207 (43.48%), Postives = 121/207 (58.45%), Query Frame = 0
Query: 2 HILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLP---ALTYIGPPPLPTPAVGTREGHAEERERLL 205
HI+NCTTPAQYFH LRRQ+LR +RKPLV+++PK+LL+ P AVS+L +M GT FQPVL+ T +K E+ V+ GK YYD VK+ + R LD ++ L+R+EELSPFP+ AL + S + W QEEP NAGA+AF++ L LP + Y+G PL PAVG ++ + LL
Sbjct: 754 HIVNCTTPAQYFHVLRRQMLRSYRKPLVVISPKSLLKSPLAVSALADMAPGTCFQPVLSDT--------SIKDDTQVEK-----------VVFVSGKFYYDAVKERQNR-GLD-DKVALVRIEELSPFPKDALVEEIQKY----SRAKDFVWCQEEPQNAGAYAFMAPRLAQLLPGNKGIQYVGREPLSAPAVGISSVFKKQAQELL 935
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|754344877|ref|XP_004349245.2| (dehydrogenase E1 and transketolase domain-containing protein [Capsaspora owczarzaki ATCC 30864] >gi|765550730|gb|KJE91351.1| dehydrogenase E1 and transketolase domain-containing protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 153.68 bits (387), Expect = 2.912e-39 Identity = 86/210 (40.95%), Postives = 119/210 (56.67%), Query Frame = 0
Query: 1 MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPT----VLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLP-ALTYIGPPPLPTPAVGTREGHAEERERLL 205
M ++N TTPAQYFH LRRQ++RP+RKPL+++ PKTLLR P+AVS L EM T+FQPVL E + P+ V++C GK+YYD+ K R D + ++++RLEEL PFP +A+ L ++ + + WVQEE N GAWAF++ + L YIG PL PAVG + H E E+L+
Sbjct: 757 MGVVNPTTPAQYFHLLRRQMVRPYRKPLIVVGPKTLLRLPAAVSDLNEMASNTSFQPVLG------------------------ESHIEPSGVKRVIVCSGKLYYDLAKQ---RDDSKRTDVVIIRLEELCPFPAAAIESELAKF----TNASEFVWVQEEQQNMGAWAFVAPRFEAQVGRKLKYIGRGPLAAPAVGVSKIHKAEVEKLM 935
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|654638573|ref|WP_028099767.1| (2-oxoglutarate dehydrogenase subunit E1 [Dongia sp. URHE0060]) HSP 1 Score: 150.214 bits (378), Expect = 4.425e-38 Identity = 85/213 (39.91%), Postives = 119/213 (55.87%), Query Frame = 0
Query: 1 MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLPAL-------TYIGPPPLPTPAVGTREGHAEERERLLT 206
M ++N TTPA YFH LRRQL R FRKPL++MTPK+LLRH +AVS LPE T+F VL W D+R G E R+ ++LC GK+YYD++++AE R + Q+ ++R+E+L PFP ALA L P + W QEEP N GAW + + + +L Y+G P +PA G + H +E+ +L+
Sbjct: 761 MQVVNATTPANYFHVLRRQLHRSFRKPLIMMTPKSLLRHKNAVSKLPEFGPNTSFHRVL--------W---------DDRLGLDEKRI-RRIVLCSGKVYYDLLQEAEAR---EQDQVYIMRVEQLYPFPHKALAAELA---RFPGAEIV--WCQEEPKNMGAWTHVMPEIESVMESLGSKQARVRYVGRPAAASPATGLFKRHVKEQNKLVN 947
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|657651482|ref|WP_029455926.1| (2-oxoglutarate dehydrogenase subunit E1 [Candidatus Pelagibacter ubique]) HSP 1 Score: 150.214 bits (378), Expect = 5.298e-38 Identity = 79/217 (36.41%), Postives = 120/217 (55.30%), Query Frame = 0
Query: 1 MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLPA-------LTYIGPPPLPTPAVGTREGHAEERERLLTTLWE 210
M ++NCTTPA YFHALRRQ+ R FRKPL++MTPK+LLR+ VS+L + TF +L +G +K +E E + V+LC GK+Y+D++ E R+ L ++L R+E+L PFP L L P + +FW QEEP N GAW + +++ +L ++YIG P TPA G + H +++ ++ ++E
Sbjct: 769 MQVMNCTTPANYFHALRRQMHRDFRKPLIMMTPKSLLRNKYCVSNLEDFSKSNTFHRILWDHAIDPQNQGFIKLKENSEIK---------KVILCSGKVYFDLL---EAREKLKKDDVILFRIEQLYPFPAKTLVKELKPY----AESAKFFWCQEEPKNMGAWFSVRDYIQWTLDTIKAKNNEISYIGRSPDATPATGYAKRHNSQQQEIIDKVFE 969
BLAST of EWM24096.1 vs. NCBI_GenBank
Match: gi|560890271|ref|WP_023647880.1| (2-oxoglutarate dehydrogenase subunit E1 [Candidatus Pelagibacter ubique]) HSP 1 Score: 150.214 bits (378), Expect = 5.560e-38 Identity = 79/217 (36.41%), Postives = 120/217 (55.30%), Query Frame = 0
Query: 1 MHILNCTTPAQYFHALRRQLLRPFRKPLVLMTPKTLLRHPSAVSSLPEMEIGTTFQPVLASTLDGRPWKGGLKGREGDEREGGREGRLPPTVLLCCGKIYYDIVKDAEGRKDLDPSQILLLRLEELSPFPRSALAPFLPPALPLPSSPTTYFWVQEEPWNAGAWAFISSHLRPSLPA-------LTYIGPPPLPTPAVGTREGHAEERERLLTTLWE 210
M ++NCTTPA YFHALRRQ+ R FRKPL+LMTPK+LLR+ VS+L + +F +L KG +K +E E + V+LC GK+Y+D++ E R+ L ++L R+E+L PFP L L P + +FW QEEP N GAW + +++ +L ++YIG P +PA G + H +++ ++ ++E
Sbjct: 769 MQVMNCTTPANYFHALRRQMHRDFRKPLILMTPKSLLRNKYCVSNLEDFSKSNSFHRILWDHAIDPQTKGFIKLKESSEIK---------KVILCSGKVYFDLL---EAREKLKKDDVILFRIEQLYPFPAKTLVKELKPY----AKNAKFFWCQEEPKNMGAWFSVRDYIQWTLDTIKANNSEISYIGRSPDASPATGYAKRHNSQQQEIINKVFE 969 The following BLAST results are available for this feature:
BLAST of EWM24096.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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