EWM24104.1, cds6570 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|585105437|gb|EWM24104.1| (atp-dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 2185.22 bits (5661), Expect = 0.000e+0 Identity = 1062/1062 (100.00%), Postives = 1062/1062 (100.00%), Query Frame = 0 Query: 1 MSLSMLRYLRLVDQAGPQKHYQLWVFLKLRKSMRTRHPYILNLLATDIFACGRMVHELPRDGRGALARHSSSSSSCQTAVSGGDLGTETCNKSSSLDKSEIITEVEGSKEIKERTDSEEEGGRHGGHGAPYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDEYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLSAPSLAGVEGEGREESGEETKLGGERQRMGESTADKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGLKLGMLVEHSHHDRDARLRHQFALKMEKLHGIPYKPPAPSQIPPSIRIEEDTGAENDDEEEEEERWRKEKDDEAEHAKLLEERGEGKENGTRGSVLDRQSQTGRRKKSDAAVRVREGKGFLSDEEEEVIRGLFAFRLARFHKELEAKRKGKERKREQGRDLIDAGEKYAHKPEVAEVGEAQTTAAEGTP 1062 MSLSMLRYLRLVDQAGPQKHYQLWVFLKLRKSMRTRHPYILNLLATDIFACGRMVHELPRDGRGALARHSSSSSSCQTAVSGGDLGTETCNKSSSLDKSEIITEVEGSKEIKERTDSEEEGGRHGGHGAPYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDEYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLSAPSLAGVEGEGREESGEETKLGGERQRMGESTADKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGLKLGMLVEHSHHDRDARLRHQFALKMEKLHGIPYKPPAPSQIPPSIRIEEDTGAENDDEEEEEERWRKEKDDEAEHAKLLEERGEGKENGTRGSVLDRQSQTGRRKKSDAAVRVREGKGFLSDEEEEVIRGLFAFRLARFHKELEAKRKGKERKREQGRDLIDAGEKYAHKPEVAEVGEAQTTAAEGTP Sbjct: 1 MSLSMLRYLRLVDQAGPQKHYQLWVFLKLRKSMRTRHPYILNLLATDIFACGRMVHELPRDGRGALARHSSSSSSCQTAVSGGDLGTETCNKSSSLDKSEIITEVEGSKEIKERTDSEEEGGRHGGHGAPYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDEYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLSAPSLAGVEGEGREESGEETKLGGERQRMGESTADKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGLKLGMLVEHSHHDRDARLRHQFALKMEKLHGIPYKPPAPSQIPPSIRIEEDTGAENDDEEEEEERWRKEKDDEAEHAKLLEERGEGKENGTRGSVLDRQSQTGRRKKSDAAVRVREGKGFLSDEEEEVIRGLFAFRLARFHKELEAKRKGKERKREQGRDLIDAGEKYAHKPEVAEVGEAQTTAAEGTP 1062
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|553184700|ref|XP_005854133.1| (atp-dependent rna helicase [Nannochloropsis gaditana CCMP526] >gi|422294926|gb|EKU22226.1| atp-dependent rna helicase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 2063.5 bits (5345), Expect = 0.000e+0 Identity = 1013/1061 (95.48%), Postives = 1019/1061 (96.04%), Query Frame = 0 Query: 1 MSLSMLRYLRLVDQAGPQKHYQLWVFLKLRKSMRTRHPYILNLLATDIFACGRMVHELPRDGRGALARHSSSSSSCQTAVSGGDLGTETCNKSSSLDKSEIITEVEGSKEIKERTDSEEEGGRHGGHGAPYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDEYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLSAPSLAGVEGEGREESGEETKLGGERQRMGESTADKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGLKLGMLVEHSHHDRDARLRHQFALKMEKLHGIPYKPPAPSQIPPSIRIEEDTGAENDDEEEEEERWRKEKDDEAEHAKLLEERGEGKENGTRGSVLDRQSQTGRRKKSDAAVRVREGKGFLSDEEEEVIRGLFAFRLARFHKELEAKRKGKERKREQGRDLIDAGEKYAHKPEVAEVGEAQTTAAEGT 1061 MSLSMLRYLRLVDQAGPQKH QLWVFLKLRKSMRTRHPYILNLLATDIFACGRMVHELPRDGRGALARHSSSSSSCQTAVSGGDLGTETCNK SSLDKSEIITEVEGSKEIKERTDSEEEGGRHGGHGAPYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKD+YLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLSAPSLAGVEGEGREESGEET+LGGERQ+MGESTADKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQA IFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHS GLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEE RWQQRKKGLSSP HASFFARDIGLEMNRGKKEENGKEETGEEGQQ SEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGLKLGMLVEHSHHDRDARLRHQFALKMEKLHGIPYKPPAPSQIPPSIRIEEDTGAENDDEEEEEERWRKEKDDEAEHAKLLEERGEGKENGTRGSVLDRQSQTGRRK+SDAAVRVR+GKGFLSDEEEEVIRGLFAFRLARFHKELEAKRKGKERKRE+GRDLIDAGEKYAHKPEVAEVGEAQTTAA GT Sbjct: 1 MSLSMLRYLRLVDQAGPQKHCQLWVFLKLRKSMRTRHPYILNLLATDIFACGRMVHELPRDGRGALARHSSSSSSCQTAVSGGDLGTETCNKFSSLDKSEIITEVEGSKEIKERTDSEEEGGRHGGHGAPYSGEKHLGRDYYSKRFRLLVQYMVEGGPPIAMREEMETRGDGLPSFQWKMAVVNFMNQAFLWPQDTLKDQYLPLLHALDDVPGAVMGSFHNTFDAWHAKVRRHSYTMSGEKPALPPLPPEFMRVEAILLPFIIRSLAAARPLSAPSLAGVEGEGREESGEETELGGERQQMGESTADKERKAMKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQAGIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHS-----------------------------------GLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEERWQQRKKGLSSPFHASFFARDIGLEMNRGKKEENGKEETGEEGQQKSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGLKLGMLVEHSHHDRDARLRHQFALKMEKLHGIPYKPPAPSQIPPSIRIEEDTGAENDDEEEEEERWRKEKDDEAEHAKLLEERGEGKENGTRGSVLDRQSQTGRRKESDAAVRVRKGKGFLSDEEEEVIRGLFAFRLARFHKELEAKRKGKERKRERGRDLIDAGEKYAHKPEVAEVGEAQTTAAGGT 1026
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|1173929508|gb|OQR82729.1| (ATP-dependent RNA helicase SUPV3L1 [Achlya hypogyna]) HSP 1 Score: 429.869 bits (1104), Expect = 9.513e-134 Identity = 236/563 (41.92%), Postives = 325/563 (57.73%), Query Frame = 0 Query: 313 MKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIA-RAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 + + L + D+RLPH WYP AR M+RKIIYH GPTNSGKTY ALQRLKMA+ +GGGLY GPLRLLALEIY+TLN GVYCSL+TG+EKR +P S H S TVEMCS YDVAV+DEIQMIGDPERG AWTRAL L+AKEIH+CG EAV++V + + TGD+ E++ YER + L I L Y K+ GDC+V FS+ + IK+EIE T +CC++YG LP ETRS QAR+FNE G+DVLVA+DAIGMGLNLNIRRI+F S++K Y G DM + L T+QIA RAG S D++ L + + +L G + + L++ A F E+ E +Q E + G +++D + ++A + Y MC+ + A+ L ++K + + ER+ P++ R+ + ++ +A A + R +PL + LP P L + ++ K ++D YLWLS++FP TF +E A+ ++ K+ ++E GL Sbjct: 170 LSTESIASLQELTDLRLPHTWYPKARAMQRKIIYHGGPTNSGKTYEALQRLKMAE--EGGGLYCGPLRLLALEIYETLNMNGVYCSLVTGEEKREVPMSTHVSCTVEMCSAGTTYDVAVVDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVDLVRKFAEITGDEFELKTYERRSPLAIEKSALGSYGKIRKGDCVVGFSRRRVFQIKREIEMATGLRCCIIYGQLPPETRSQQARLFNEPDNGYDVLVASDAIGMGLNLNIRRIVFDSVLK------------------------------------YDGADMVDISSSL---TKQIAGRAGRSGS-----DYSHGLATTLA----PNDLSFVHGAYHEAPATLTA---AGLFP---------------SSEQMVEFAKQMPETTDLG----QLLDKYVSLARLDGAYFMCKFADIKQAAALLVELK-MDLQERFTFCMAPVNLRNPLSRKIFTDYATAHSEGREVPLDIFLPRFAPKNELALRDIEIKAKIIDVYLWLSYRFPETFKMQEQAIDLKTKVVALIEEGL 659
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|669160860|ref|XP_008615992.1| (hypothetical protein SDRG_11720 [Saprolegnia diclina VS20] >gi|530732424|gb|EQC30666.1| hypothetical protein SDRG_11720 [Saprolegnia diclina VS20]) HSP 1 Score: 424.091 bits (1089), Expect = 1.177e-131 Identity = 229/563 (40.67%), Postives = 324/563 (57.55%), Query Frame = 0 Query: 313 MKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIA-RAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 + + L + D+RLPH W+P AR ++RKIIYH GPTNSGKTY ALQRLKMA+ GGGLY GPLRLLALEIY+TLN GVY SL+TG+EKR +P + H + TVEMCS Q YDVAV+DEIQMIGDPERG AWTRAL L+AKEIH+CG EAV++V + Q TGDD E++ YER + L+I L Y+K+ GDC+V FS+ + IK EIE T +CC++YG LP ETRS QAR+FNE G+DVLVA+DAIGMGLNLNIRRI+F S++K + G DM + L T+QIA RAG S D++ L + + +L +G + + L++ G T E+ + +++ E L +++D + ++A + Y MC+ + A+ L +K + + ER+ P++ R+ + ++ + A + R +PL + LP P L + ++ K ++D YLWLS++FP TF + A++++ K+ ++E GL Sbjct: 157 LSTESIASLQELTDLRLPHTWFPKARSLQRKIIYHGGPTNSGKTYEALQRLKMAE--DGGGLYCGPLRLLALEIYETLNMAGVYTSLVTGEEKREVPMATHVACTVEMCSAGQTYDVAVIDEIQMIGDPERGWAWTRALSCLQAKEIHVCGSMEAVDLVRKFAQTTGDDFELKTYERRSPLSIEKSALGSYAKIRKGDCVVGFSRRRVFQIKHEIEKATGLRCCIIYGQLPPETRSQQARLFNEPDNGYDVLVASDAIGMGLNLNIRRIVFDSVLK------------------------------------FDGADMVDISSSL---TKQIAGRAGRSGS-----DYSHGLATTLA----PNDLSFVQGAYHEAPSALTAA----------------------GLFPTSEQMVEFAKQMPETTDLGQLLDKYVSLARLDGAYFMCKFADIKQAAALLVDLK-MDLQERFTFCMAPVNLRNPLSRKIFTDYVMAHSEGREVPLDIFLPRFAPKNELALRDVEIKAKIIDVYLWLSYRFPETFTMQLQAIELKTKVLELVEQGL 646
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|970654116|gb|KUF92474.1| (hypothetical protein AM588_10003757 [Phytophthora nicotianae]) HSP 1 Score: 422.165 bits (1084), Expect = 1.859e-131 Identity = 229/560 (40.89%), Postives = 331/560 (59.11%), Query Frame = 0 Query: 321 LVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEV-LHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFAS-----LLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 VR+ D+RLPH+ YPYA M+RKIIYH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALEI++ +N +G+Y SL+TGQEK+L+P+S H S TVEM ++ + +DVAV+DEIQ+IGDP+RG AWTRAL GL+AKEIH+CG EAV +V + + TGDD E+R YER + L IA + L YS + GDC+VAFS+ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ F++LVA+DA+GMGLNLNIRR++F ++ K S G + + + KQIAG RAG + S DFAS LLE +G +K S + + +PL ++ GL + + EE K+ G L +++D + +A + Y MC + M A+ L + L++++R+ P+S R+ A ++ ++A A + + + L + LP P T + ++ K ++D YLWLS +F TFV+++ AL+++ K+ ++E GL Sbjct: 52 FVRLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQA--GEDGGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGSYSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAG-------------------------------------RAGRYGS-----DFASGEATCLLEEDLGYLKESYD-------------EVPTPLTSA------GLFPSSEQMEEFAKQLPGITD------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYAPRTAEALGDVEIKAKIIDLYLWLSFRFEDTFVEKDLALELKTKVLELVEQGL 535
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|676389189|ref|XP_009037873.1| (hypothetical protein AURANDRAFT_10272, partial [Aureococcus anophagefferens] >gi|323451361|gb|EGB07238.1| hypothetical protein AURANDRAFT_10272, partial [Aureococcus anophagefferens]) HSP 1 Score: 416.001 bits (1068), Expect = 3.084e-131 Identity = 231/539 (42.86%), Postives = 315/539 (58.44%), Query Frame = 0 Query: 326 DMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIE-AKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSG--------MIKQIAGRAGRRSSRFPR--GEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTF 853 D+R P +WYP ARL RR++IYH GPTNSGKTYHAL+ LK AD GGG+Y GPLRLLALE+Y+ LN G YCSL TGQE+R +PF+ H S T+EM + + +DVAV+DEIQMIG P+RGHAWTRAL GL A+EIH+CG +A +V RLC TGD E+++YER+T LT L ++ V GDC+V FS+ DI +++EIE A KCC+VYG LP ETR+ QAR+FN+E +G+DVLVA+DA+GMGLNLNI R++F ++K S E E L ++KQIAGRAGR ++ F G VT D+ ++R L + ++RAGLFP E L FA+ ELG + GL + A A DI +E ++E +++ +D + +++D C + P ++ +R+ A+ ML +A ARA +VRLP P+ L +++LC+KH+VLD YLWL+ +FP TF Sbjct: 5 DLRAPEEWYPKARLSRRRVIYHGGPTNSGKTYHALEALKRADADGGGGVYAGPLRLLALEVYERLNAAGCYCSLFTGQERREVPFATHASCTIEMVPVGRRWDVAVVDEIQMIGSPDRGHAWTRALHGLDAREIHVCGALDAAALVERLCGITGDAFELKEYERLTPLTTERAHLDGWTGVKKGDCVVTFSRDDIHRVRREIETANEDMKCCVVYGQLPPETRAQQARLFNDEASGYDVLVASDAVGMGLNLNIGRVLFRQILKYSGELSDEALDGTRLSPVEHQLVKQIAGRAGRMATAFSSGGGGVTAMDARDLSYVRAALAAPNDAVSRAGLFPPAEILALFAA-------------ELGDAD-------MGLGDVVAAFVEACDI------------------DESLYYVCGQDEVAKVVKKLDDDIRL-DLADMLLFCTA--------------PCNLNDRF-------------AVSMLNAYARARAGGGRCGPNVRLPKGRPSKLSDLHDLCSKHNVLDLYLWLAFRFPETF 477
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|1173946330|gb|OQR94875.1| (ATP-dependent RNA helicase SUPV3L1 [Thraustotheca clavata]) HSP 1 Score: 417.542 bits (1072), Expect = 3.208e-129 Identity = 227/563 (40.32%), Postives = 324/563 (57.55%), Query Frame = 0 Query: 313 MKDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIA-RAGLFPSPEQLEDFASLLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 + + L + D+RLPH W+P AR MRRKIIYH GPTNSGKTY ALQRL +A+ GGGLY GPLRLLALEIY+TLN GVYCSL+TG+EKR +P S H S TVEMCS YDVAV+DEIQMIGDP+RG AWTRAL L+A+EIH+CG EAV++V + + GDD E++ YER + L+I L Y K+ GDC+V FS+ + IK+EIE T +CC++YG LP ETRS QAR+FNE G+DVLVA+DAIGMGLNLNI RI+F S++K + G DM + L T+QIA RAG S D++ L + + +L +G +++ + L++ A F E+ E +Q E + G ++++ + ++A + Y MC+ + A L + K + + ER+ P++ R+ + ++ +A A + R +PL + LP P L + ++ K ++D YLWLS++FP TF ++ A++++ ++ ++E GL Sbjct: 158 LSSESIASLQELTDLRLPHTWFPKARAMRRKIIYHGGPTNSGKTYEALQRLMLAE--NGGGLYCGPLRLLALEIYETLNMNGVYCSLVTGEEKREVPMSTHVSCTVEMCSAGSQYDVAVVDEIQMIGDPDRGWAWTRALSCLQAQEIHVCGSLEAVDLVRKFAEVAGDDFELKTYERRSPLSIEKAALGSYDKIRKGDCVVGFSRRRVFQIKREIEMATGLRCCIIYGQLPPETRSQQARLFNEPDNGYDVLVASDAIGMGLNLNIHRIVFDSVLK------------------------------------FDGADMVDISSSL---TKQIAGRAGRSGS-----DYSHGLATTLA----PADLSYVQGAYREEPRALTA---AGLFP---------------SSEQMVEFAKQMPETTDLG----QLLEKYVSLARLDGAYFMCKFADIKQAAGLLTEFK-MDLQERFTFCMAPVNLRNPLSRKIFTDYAMAHSEGREVPLDIFLPRFAPKNELALRDIEIKAKIIDVYLWLSYRFPETFKMQDQAIELKSRVLELVEEGL 647
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|675172067|ref|XP_008894918.1| (hypothetical protein PPTG_04427 [Phytophthora parasitica INRA-310] >gi|566016133|gb|ETI39044.1| hypothetical protein F443_15330 [Phytophthora parasitica P1569] >gi|567953587|gb|ETK79238.1| hypothetical protein L915_14882 [Phytophthora parasitica] >gi|567982234|gb|ETL32659.1| hypothetical protein L916_14786 [Phytophthora parasitica] >gi|568011749|gb|ETL85927.1| hypothetical protein L917_14599 [Phytophthora parasitica] >gi|568041681|gb|ETM39068.1| hypothetical protein L914_14739 [Phytophthora parasitica] >gi|568104352|gb|ETN18997.1| hypothetical protein PPTG_04427 [Phytophthora parasitica INRA-310] >gi|570943684|gb|ETP08941.1| hypothetical protein F441_15150 [Phytophthora parasitica CJ01A1] >gi|570974684|gb|ETP36989.1| hypothetical protein F442_15174 [Phytophthora parasitica P10297] >gi|970628828|gb|KUF76296.1| ATP-dependent RNA helicase SUPV3L1 [Phytophthora nicotianae]) HSP 1 Score: 419.468 bits (1077), Expect = 7.429e-129 Identity = 228/560 (40.71%), Postives = 331/560 (59.11%), Query Frame = 0 Query: 321 LVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEV-LHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFAS-----LLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 L ++ D+RLPH+ YPYA M+RKIIYH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALEI++ +N +G+Y SL+TGQEK+L+P+S H S TVEM ++ + +DVAV+DEIQ+IGDP+RG AWTRAL GL+AKEIH+CG EAV +V + + TGDD E+R YER + L IA + L YS + GDC+VAFS+ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ F++LVA+DA+GMGLNLNIRR++F ++ K S G + + + KQIAGR AG + S DFAS LLE +G +K S + + +PL ++ GL + + EE K+ G L +++D + +A + Y MC + M A+ L + L++++R+ P+S R+ A ++ ++A A + + + L + LP P T + ++ K ++D YLWLS +F TFV+++ AL+++ K+ ++E GL Sbjct: 178 LQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQA--GEDGGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGSYSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGR-------------------------------------AGRYGS-----DFASGEATCLLEEDLGYLKESYD-------------EVPTPLTSA------GLFPSSEQMEEFAKQLPGITD------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYAPRTAEALGDVEIKAKIIDLYLWLSFRFEDTFVEKDLALELKTKVLELVEQGL 661
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|570319832|gb|ETO67780.1| (hypothetical protein F444_15334 [Phytophthora parasitica P1976]) HSP 1 Score: 417.542 bits (1072), Expect = 3.980e-128 Identity = 227/560 (40.54%), Postives = 331/560 (59.11%), Query Frame = 0 Query: 321 LVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEV-LHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIARAGLFPSPEQLEDFAS-----LLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 L ++ D+RLPH+ YPYA M+RKIIYH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALEI++ +N +G+Y SL+TGQEK+L+P+S H S TVEM ++ + +DVAV+DEIQ+IG+P+RG AWTRAL GL+AKEIH+CG EAV +V + + TGDD E+R YER + L IA + L YS + GDC+VAFS+ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ F++LVA+DA+GMGLNLNIRR++F ++ K S G + + + KQIAGR AG + S DFAS LLE +G +K S + + +PL ++ GL + + EE K+ G L +++D + +A + Y MC + M A+ L + L++++R+ P+S R+ A ++ ++A A + + + L + LP P T + ++ K ++D YLWLS +F TFV+++ AL+++ K+ ++E GL Sbjct: 178 LQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQA--GEDGGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGNPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGSYSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMIDIPPSLAKQIAGR-------------------------------------AGRYGS-----DFASGEATCLLEEDLGYLKESYD-------------EVPTPLTSA------GLFPSSEQMEEFAKQLPGITD------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYAPRTAEALGDVEIKAKIIDLYLWLSFRFEDTFVEKDLALELKTKVLELVEQGL 661
BLAST of EWM24104.1 vs. NCBI_GenBank
Match: gi|695379901|ref|XP_009516660.1| (hypothetical protein PHYSODRAFT_537681 [Phytophthora sojae] >gi|348689571|gb|EGZ29385.1| hypothetical protein PHYSODRAFT_537681 [Phytophthora sojae]) HSP 1 Score: 413.305 bits (1061), Expect = 6.717e-128 Identity = 229/567 (40.39%), Postives = 338/567 (59.61%), Query Frame = 0 Query: 314 KDSGLGQLVRVCDMRLPHDWYPYARLMRRKIIYHAGPTNSGKTYHALQRLKMADPAKGGGLYLGPLRLLALEIYDTLNEEGVYCSLLTGQEKRLIPFSDHTSATVEMCSLRQDYDVAVLDEIQMIGDPERGHAWTRALLGLRAKEIHLCGGPEAVEVVSRLCQATGDDLEIRKYERMTELTIASEPLLDYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQARIFNEEGTGFDVLVATDAIGMGLNLNIRRIIFHSLIKVSDEGGAEVLHSGMIKQIAGRAGRRSSRFPRGEVTCYKGEDMEFLRQGLGTATEQIA-RAGLFPSPEQLEDFAS-----LLESQVGRIKGSGELGGEEGRWQQRKKGLSSPLHASFFARDIGLEMNRGKKEENGKEETGEEGQQTSEEEEEGLGLMEVMDSFFNMAEVSDTYHMCRSRSMASIASYLAQVKPLSIAERYILSSVPISSRDRFAMQMLYQFAAARAARRPMPLSVRLPASPPTTLLGMNELCTKHSVLDAYLWLSHKFPSTFVQRESALQMRVKLTRMLESGL 874 D+ L L ++ D+RLPH+ YPYA M+R+IIYH GPTNSGKT+ AL+RLK A + GG+Y GPLRLLALEIY+ +N +G+Y SL+TGQEK+++P+S H S TVEM ++ + +DVAV+DEIQ+IGDP+RG AWTRAL GL+AKEIH+CG EAV +V + + TGD+ E+R YER + L I++ L +YS + GDC+VAFS+ DI IK++IE KT KCC++YG LP ETRS QAR+FN+ F++LVA+DA+GMGLNLNIRR++F ++ K S GG+ GM+ A A +QIA RAG + S DFAS LLE + +K S + + +PL ++ GL + + EE K+ G L +++D + +A + Y MC + M A+ L + L++++R+ P+S R+ A ++ ++A A + + + L + LP PP T + ++ K ++D YLWLS +F TFV+++ AL+++ ++ ++E GL Sbjct: 87 NDNALS-LQQLTDLRLPHEMYPYATAMKRRIIYHEGPTNSGKTHQALERLKQA--GEDGGIYCGPLRLLALEIYERMNSDGLYTSLVTGQEKKIVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDEFELRSYERRSPLEISTTHLKNYSNIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYS--GGS----GGMVDIPASLA-------------------------------KQIAGRAGRYGS-----DFASGEATCLLEEDLEYLKESYD-------------EVPTPLTSA------GLFPSSEQMEEFAKQLPGITD------------LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYPPRTADALGDVEIKAKIIDLYLWLSFRFEETFVEKDLALELKARVLELVEQGL 576 The following BLAST results are available for this feature:
BLAST of EWM24104.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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