EWM24107.1, cds6565 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|585105441|gb|EWM24107.1| (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 833.173 bits (2151), Expect = 0.000e+0 Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query: 1 MARIMRSVATMAMLTFASLAVAESPMRRMQSLTGVLSGAAKDVMEDTLPAYKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTERDPAKLDAFVKDYAASRRFRFCTFTLFPILFYIMHFLFDKSLSGSETHYSTLKTGNTEETEEGCRTFSMRRNVSKVTARQGGSQASIFFNVCVERDARGRRREGRLIFRCDTTQTLWLRRHCKPLFNFKFLMPFRFESLMYMRLDMDRTLMYAVRQEETGRGSGHAISLD 404
MARIMRSVATMAMLTFASLAVAESPMRRMQSLTGVLSGAAKDVMEDTLPAYKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTERDPAKLDAFVKDYAASRRFRFCTFTLFPILFYIMHFLFDKSLSGSETHYSTLKTGNTEETEEGCRTFSMRRNVSKVTARQGGSQASIFFNVCVERDARGRRREGRLIFRCDTTQTLWLRRHCKPLFNFKFLMPFRFESLMYMRLDMDRTLMYAVRQEETGRGSGHAISLD
Sbjct: 1 MARIMRSVATMAMLTFASLAVAESPMRRMQSLTGVLSGAAKDVMEDTLPAYKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTERDPAKLDAFVKDYAASRRFRFCTFTLFPILFYIMHFLFDKSLSGSETHYSTLKTGNTEETEEGCRTFSMRRNVSKVTARQGGSQASIFFNVCVERDARGRRREGRLIFRCDTTQTLWLRRHCKPLFNFKFLMPFRFESLMYMRLDMDRTLMYAVRQEETGRGSGHAISLD 404
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|553183764|ref|XP_005853961.1| (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >gi|422295096|gb|EKU22395.1| hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 513.072 bits (1320), Expect = 0.000e+0 Identity = 256/260 (98.46%), Postives = 257/260 (98.85%), Query Frame = 0
Query: 1 MARIMRSVATMAMLTFASLAVAESPMRRMQSLTGVLSGAAKDVMEDTLPAYKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTERDPAKLDAFVKDYAASRRFRF--CTF 258
MARIMRSVATMAMLTFASLAVAESPMRRMQSLTGVLSGAAKDVMEDTLPAYKPD ELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTERDPAKLDAFVKDYAASRRFRF CT+
Sbjct: 1 MARIMRSVATMAMLTFASLAVAESPMRRMQSLTGVLSGAAKDVMEDTLPAYKPDGELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTERDPAKLDAFVKDYAASRRFRFSRCTW 260
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|585104564|gb|EWM23494.1| (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 117.857 bits (294), Expect = 1.594e-26 Identity = 60/171 (35.09%), Postives = 97/171 (56.73%), Query Frame = 0
Query: 59 MMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVT 229
Q K+G+D ++LFET F S ++IL++VE QH+I+E +P+L A GF+E GRRL D TTAGF+ G+ ++L+ K +P++ ++EL D I + F AS D ++ + + LYPGV+ ++L+ V S K+ E+ R I+ DP ++
Sbjct: 134 FFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYIS 304
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|585107197|gb|EWM25436.1| (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 110.153 bits (274), Expect = 1.837e-23 Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = 0
Query: 52 KPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLIN 223
+P+ ++ +Q K +D ++LF S +A+L +VE QH+I++ +PLLAAFDGF++ITGRRL T GF G+ +++ +KDP + ++++ A+ I F A GD A++ + + N +PGV+ VL+ V + K+ EIMR I+
Sbjct: 118 RPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFID 289
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|553185360|ref|XP_005854240.1| (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >gi|422294820|gb|EKU22120.1| hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 82.0333 bits (201), Expect = 6.142e-15 Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0
Query: 59 MMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKT 143
Q K+G+D ++LFET F S ++IL++VE QH+I+E +P+L A GF+E GRRL D TTAGF+ G+ ++L +M KT
Sbjct: 80 FFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLL----EMFKT 160
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|585102650|gb|EWM22205.1| (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 79.337 bits (194), Expect = 4.610e-13 Identity = 56/220 (25.45%), Postives = 100/220 (45.45%), Query Frame = 0
Query: 25 PMRRMQSLTGVLSGAAKDVMEDTLPA--------YKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEIT-GRRLDDAGTTAGFTAGLNSILKTLPD-MLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTE 234
P R+QS TG S ++ V + KP + + + KN + +++F+ + + G KAILD+ + QH+++++ PLL A GF I RRL T F+ G+N++L D + +P + L+++ A I F A AG+ GA++ + + + Y G++ + +S K E+M I D + A +
Sbjct: 35 PFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFED 254
BLAST of EWM24107.1 vs. NCBI_GenBank
Match: gi|553185077|ref|XP_005854196.1| (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >gi|422294860|gb|EKU22160.1| hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 65.0846 bits (157), Expect = 4.286e-8 Identity = 48/215 (22.33%), Postives = 90/215 (41.86%), Query Frame = 0
Query: 52 KPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEIT-GRRLD------------------------------DAGTTAGFTAGLNSILKTLPD-MLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTE 234
KP + + + KN + +++F+ + + G KAILD+ + QH+++++ PLL A GF I RRL +A T F+ G+N++L D + +P + L+++ A I F A AG+ GA++ + + + Y G++ + ++ K E+M I D + A +
Sbjct: 70 KPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKDASLAKAFED 284 The following BLAST results are available for this feature:
BLAST of EWM24107.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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