EWM30020.1, cds654 (CDS) Nannochloropsis gaditana

Overview
NameEWM30020.1
Unique Namecds654
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:89801..91171 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30020.1
Productformamidopyrimidine-dna glycosylase
Orig transcript idgnl|cribi|Naga_100391g3.3409.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:89801..91171 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003677DNA binding
GO:0003676nucleic acid binding
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0003684damaged DNA binding
GO:0008270zinc ion binding
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
Vocabulary: INTERPRO
TermDefinition
IPR010979Ribosomal_S13-like_H2TH
IPR015886DNA_glyclase/AP_lyase_DNA-bd
IPR012319DNA_glycosylase/AP_lyase_cat
Homology
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|585112643|gb|EWM30020.1| (formamidopyrimidine-dna glycosylase [Nannochloropsis gaditana])

HSP 1 Score: 933.71 bits (2412), Expect = 0.000e+0
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKGGRIKDKVEGEVVEEQEKVGKGSRAQSGSTRAKKVIKIEGENNDTETSEKERGKRTKPINYGAAARKETKTRKKIPGSSPSGAKVRQGTKQRSAGKEAENASCTAHAEPRRSPRARPAGKK 456
            MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKGGRIKDKVEGEVVEEQEKVGKGSRAQSGSTRAKKVIKIEGENNDTETSEKERGKRTKPINYGAAARKETKTRKKIPGSSPSGAKVRQGTKQRSAGKEAENASCTAHAEPRRSPRARPAGKK
Sbjct:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKGGRIKDKVEGEVVEEQEKVGKGSRAQSGSTRAKKVIKIEGENNDTETSEKERGKRTKPINYGAAARKETKTRKKIPGSSPSGAKVRQGTKQRSAGKEAENASCTAHAEPRRSPRARPAGKK 456          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|551624875|ref|XP_005792640.1| (putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516] >gi|485646855|gb|EOD40211.1| putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 215.698 bits (548), Expect = 6.445e-62
Identity = 136/333 (40.84%), Postives = 180/333 (54.05%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHR-SMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQ 332
            MPELPEV A  S I+   +GRR+  ++  EQGGGPR G +DD V  +    +V   +++ R +  V RRGK LW+EL +S          +G A  +            +L HMGMTG+++ Q VA P Y+SFA+D T  WPP+  K E +  ++   G     +RLAF D RR+GR+ +  A   DP +  PL  LA D   + P    FA  L+    P+KAALLDQ R+VCGVGNWVADEVLYQAG  PA  C  L EE++  +   +  VC  AC    R   FP             +    +  P G R+ F+TVGGRTTA VP+ Q
Sbjct:    1 MPELPEVEAQRSTIEAATLGRRIATLIAVEQGGGPREGQFDDKVIAEEVTPDVLAITLQDRWVLGVRRRGKQLWLELGES----------KGGACCA-----------CLLIHMGMTGAVIVQGVAAPVYKSFAVDET-AWPPRFTKLELLMADA--AGVSAPCVRLAFTDPRRFGRVLLRGA---DPFSRPPLSALAADPVTDPPSAEAFASVLRRVRAPIKAALLDQGRVVCGVGNWVADEVLYQAGVLPAAPCESLSEEQLAAIHAQVLAVCTAACGRLERGCDFPG------------QTSGSMASPLG-RIHFDTVGGRTTAFVPARQ 293          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|551581721|ref|XP_005776340.1| (putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516] >gi|485628444|gb|EOD23911.1| putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 215.698 bits (548), Expect = 1.090e-61
Identity = 136/333 (40.84%), Postives = 179/333 (53.75%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHR-SMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQ 332
            MPELPEV A  S I+   +GRR+  ++  EQGGGPR G +DD V  +    +V   +++ R +  V RRGK LW+EL +S          +G A               +L HMGMTG+++ Q VA P Y+SFA+D T  WPP+  K E +  ++   G     +RLAF D RR+GR+ +  A   DP +  PL  LA D   + P    FA  L+    P+KAALLDQ R+VCGVGNWVADEVLYQAG  PA  C  L EE++  +   +  VC  AC    R   FP             +    +  P G R+ F+TVGGRTTA VP+ Q
Sbjct:    1 MPELPEVEAQRSTIEAATLGRRIATLIAVEQGGGPREGQFDDKVIAEEVTPDVLAITLQDRWVLGVRRRGKQLWLELGES----------KGGAC-----------CACLLIHMGMTGAVIVQGVAAPVYKSFAVDET-AWPPRFTKLELLMADA--AGVSAPCVRLAFTDPRRFGRVLLRGA---DPFSRPPLSALAADPVTDPPSAEAFASVLRRVRAPIKAALLDQGRVVCGVGNWVADEVLYQAGVLPAAPCESLSEEQLAAIHAQVLAVCTAACGRLERGCDFPG------------QTSGSMASPLG-RIHFDTVGGRTTAFVPARQ 293          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|915153824|ref|XP_013328300.1| (DNA-formamidopyrimidine glycosylase [Rasamsonia emersonii CBS 393.64] >gi|802091978|gb|KKA21688.1| DNA-formamidopyrimidine glycosylase [Rasamsonia emersonii CBS 393.64])

HSP 1 Score: 206.838 bits (525), Expect = 1.013e-58
Identity = 135/411 (32.85%), Postives = 209/411 (50.85%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKA--DEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLA--VFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKGGRIKDKVEGEVVEEQEKVGKGSRAQSGSTRAKKVIKIEGENNDTETSEKERGKRTKPINYGA-AARKETKT 406
            MPEL EVA +   I+K ++G+ L +V T+           DD+V+GKA     E  ++M+G+ +   G++GK+ W+ +C                 P  A           + H GM G L  ++     YR+   +  E WPPK+ K     +E PK          AF D RR  RI+++     D R  SPLKE  PD   ++         E L+   +PVKA LLDQ  I  G+GNW+ DE+LY A   P +  + L + ++++++  + +VC T+  V   S+ FP DWLF  RW+K KK++  V  P+G ++VF TVGGRT+A+VP+VQ+  G   KD  + +V ++++  G      +G  R +  +K E ++ D ET+  +R    K    GA +A KE +T
Sbjct:    1 MPELAEVARIVHFIRKHLVGKTLANVQTQN----------DDIVYGKAGTSAAEFQKAMQGKKIIGAGQQGKYFWITMCS----------------PPHA-----------VMHFGMAGWLKIKNADTYYYRTTKEEDKE-WPPKYWKFLLETDEDPK-------TEAAFVDFRRLARIRLVDCPADDIRKYSPLKENGPDPLADKDVFTEDWLLENLRSKKVPVKAWLLDQANI-SGIGNWMGDEILYHAKIHPEQYSNTLSDAQIKQLYSSINYVCTTSVDVLADSDQFPEDWLFKHRWSKGKKNQPAVL-PNGNKIVFLTVGGRTSAVVPAVQKKTGPVAKDIADEDVGKDEDANG----TSAGGKRKRGTVKKEDDSEDDETTGPKRAASRKGKTGGAKSAIKEEET 360          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|1027018970|ref|XP_016604971.1| (formamidopyrimidine-DNA glycosylase [Spizellomyces punctatus DAOM BR117] >gi|907090523|gb|KNC96931.1| formamidopyrimidine-DNA glycosylase [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 206.453 bits (524), Expect = 7.656e-58
Identity = 137/400 (34.25%), Postives = 194/400 (48.50%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKG----GRIKDKVEGEVVEEQEKVGKGSRAQSGSTR--AKKVIKIEGENNDTETSEKERGKRTKPI 394
            MPELPEV      I    + + +V V T          + DD+V+     QE    ++GR L   GRRGK  ++ + D  P C                          + H+GMTGS+  +  A  +Y+ F+    + WPP+  K    F++  +         LAF D RR  RI+++     DP    P+ EL  D  +  PDL VF+E ++    P+KA LLDQ     GVGNWVADEVL+QA   PA+    L + E+  + + L+ V  TA AVN  S  FP+DWLFH+RW K +      + PDG  + FETV GRTTAIVP+VQ++ G    GR K+K + E+ EE         A+    +   +K IK+E + +  +     R  R K I
Sbjct:    1 MPELPEVERARLLIHSNFLNKAIVDVET----------VVDDIVYQGCTNQEFATKVKGRTLVDTGRRGKVFYL-ILDQHP-CP-------------------------VLHLGMTGSVRIKGQAGLEYKDFST-AGDDWPPRFYKFVIRFDDGQE---------LAFTDMRRLARIRLVDG---DPLLHPPISELGFDPLLSMPDLDVFSETVRKRKCPIKALLLDQA-FSAGVGNWVADEVLFQARVHPAQNTVSLTDAELAALHDQLSFVIKTAVAVNADSSKFPNDWLFHYRWGKGRVTNREAKMPDGSNIKFETVAGRTTAIVPAVQKLHGNTIIGRRKNKTKSELKEEDTGASHPDAAEEVPIKGNGRKRIKVERDQDIADVESSPRTTRRKRI 349          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|953422087|ref|XP_014553115.1| (hypothetical protein COCVIDRAFT_29633 [Bipolaris victoriae FI3] >gi|578486056|gb|EUN23539.1| hypothetical protein COCVIDRAFT_29633 [Bipolaris victoriae FI3])

HSP 1 Score: 201.83 bits (512), Expect = 2.601e-56
Identity = 123/366 (33.61%), Postives = 190/366 (51.91%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGK--ADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAV--FAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIK---GGRIKDKVEGEVVEEQEKVGKGSR 359
            MPE+ EVA +   +KK  +G+ +  V T+E          D++V+GK         ++M G+ +    ++GK+ W+ + D+ P                            L H GM+G + F +     YR    +  E WPPK+ K  F+F+    +G+  NE+  AF D RR  RI+++ A   D R  +PLKE  PD  +++  L V    ++LK   +PVKA LLDQ  I  G+GNWV DE+++QA   P +  +   +E+V+R+++ + +VC TA   NG S++FP DWL   RW K KK+ + +  P G ++ F  VGGRT+AIVPSVQ+      G + D  E E  E   K+ K ++
Sbjct:    1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQE----------DNIVYGKVGTSAAAFQKAMSGKKILDARQQGKYFWL-VMDTAPHP--------------------------LMHFGMSGWMKFSNDETAYYRPTKPEEAE-WPPKYWK--FIFQ---LQGEPKNEV--AFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPVIDKDILTVEWLGKKLKSKRVPVKALLLDQANI-SGIGNWVGDEIMFQAKLHPEQYSNTFSDEQVKRLYDAMMYVCDTAVQANGDSDSFPQDWLMKHRWGKGKKEASKL--PTGEKITFLKVGGRTSAIVPSVQKKTAAVAGDVSDNAEAEDSEADTKLKKSNK 318          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|928527638|ref|XP_014082616.1| (hypothetical protein COCC4DRAFT_30449 [Bipolaris maydis ATCC 48331] >gi|451999073|gb|EMD91536.1| hypothetical protein COCHEDRAFT_1194331 [Bipolaris maydis C5] >gi|477591635|gb|ENI08707.1| hypothetical protein COCC4DRAFT_30449 [Bipolaris maydis ATCC 48331])

HSP 1 Score: 200.675 bits (509), Expect = 8.214e-56
Identity = 124/366 (33.88%), Postives = 186/366 (50.82%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGK--ADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAV--FAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIK---GGRIKDKVEGEVVEEQEKVGKGSR 359
            MPE+ EVA +   +KK  +G+ +  V T+E          D++V+GK         ++M G+ +    ++GK+ W+ + D+ P                            L H GM+G + F +     YR    +  E WPPK+ K     +E PK     NE+  AF D RR  RI+++ A   D R  +PLKE  PD  +++  L V   +++LK   +PVKA LLDQ  I  G+GNWV DE++YQA   P +  +   +E+V+R+ + + +VC TA   NG S++FP DWL   RW K KK+ + +  P G ++ F  VGGRT+AIVPSVQ+      G + D  E E  E   K  K ++
Sbjct:    1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQE----------DNIVYGKVGTSAAAFQKAMSGKKILDARQQGKYFWL-VMDTAPHP--------------------------LMHFGMSGWMKFSNDETAYYRPTKPEEAE-WPPKYWKFILQLQEEPK-----NEV--AFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPVIDKDILTVEWLSKKLKSKRVPVKALLLDQANI-SGIGNWVGDEIMYQAKLHPEQYSNTFSDEQVKRLHDAMMYVCDTAVQANGDSDSFPQDWLMKHRWGKGKKEASKL--PTGEKITFLKVGGRTSAIVPSVQKKTAAVAGDVSDNAEAEDSEANTKPKKSNK 318          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|915062619|ref|XP_013272154.1| (formamidopyrimidine-DNA glycosylase [Rhinocladiella mackenziei CBS 650.93] >gi|759328690|gb|KIX05018.1| formamidopyrimidine-DNA glycosylase [Rhinocladiella mackenziei CBS 650.93])

HSP 1 Score: 199.519 bits (506), Expect = 1.112e-55
Identity = 123/354 (34.75%), Postives = 181/354 (51.13%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKA--DEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAV--FAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKGGRIKDKVEGEVVEE 350
            MPE+ EVA     I+K ++G+ L  V+  E          D+ VFGKA     E    M G+ +   G++GK+ W+ +  S P                            + H GM+G L F+      Y+  A    E WPPK  K  F+ E  P+ G+    +  AF D RR+ RI+++       R E+PLKE  PD  ++R  + V    E+ K   +P+KA LLDQ  I+ G+GNWV DE++Y A   P +  + L +E++ R+ + + ++C TA  +   SE FP DWLF  RWAK KK  A +  P+G ++ F TVGGRT+A+VPSVQ+  G   K+  E E ++E
Sbjct:    1 MPEIGEVARTVHYIRKLLVGKTLSKVIATE----------DNNVFGKAGTSAAEFQEHMTGKKIVDAGQQGKYFWI-IMSSPPHP--------------------------VMHFGMSGWLKFKSEHTYYYQPKAGGENEPWPPKFVK--FMIETKPENGEE--AIEAAFVDMRRFARIRLVDCPASQIRNETPLKENGPDPVIDRDIVTVAWLKEKCKAKKVPIKAMLLDQ-AIISGIGNWVGDEIMYNAKIHPEQYANTLTDEQITRLHQSVHYICRTAVELLADSEQFPDDWLFKHRWAKGKKGNANIL-PNGEKIAFLTVGGRTSAVVPSVQKKTGPVAKEMSEAEGLDE 311          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|628223958|ref|XP_007715307.1| (hypothetical protein COCCADRAFT_7568 [Bipolaris zeicola 26-R-13] >gi|576916101|gb|EUC30372.1| hypothetical protein COCCADRAFT_7568 [Bipolaris zeicola 26-R-13])

HSP 1 Score: 197.593 bits (501), Expect = 1.259e-54
Identity = 122/366 (33.33%), Postives = 188/366 (51.37%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGK--ADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAV--FAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIK---GGRIKDKVEGEVVEEQEKVGKGSR 359
            MPE+ EVA +   +KK  +G+ +  V T+E          D++V+GK         ++M G+ +    ++GK+ W+ + D+ P                            L H GM+G + F +     YR    +  E WPPK+ K  F+ +    +G+  NE+  AF D RR  RI+++ A   D R  +PLKE  PD  +++  L V    ++LK   +PVKA LLDQ  I  G+GNWV DE+++QA   P +  +   +E+V+R+++ + +VC TA   NG S++FP DWL   RW K KK+ + +  P G ++ F  VGGRT+AIVPSVQ+      G + D  E E  E   K  K ++
Sbjct:    1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQE----------DNIVYGKVGTSAAAFQKAMSGKKILDARQQGKYFWL-VMDTAPHP--------------------------LMHFGMSGWMKFSNDETAYYRPTKPEEAE-WPPKYWK--FILQ---LQGEPKNEV--AFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPVIDKDILTVEWLGKKLKSKRVPVKALLLDQANI-SGIGNWVGDEIMFQAKLHPEQYSNTFSDEQVKRLYDAMMYVCDTAVQANGDSDSFPQDWLMKHRWGKGKKEASKL--PTGEKITFLKVGGRTSAIVPSVQKKTAAVAGDVSDNAEAEDSEADTKPKKSNK 318          
BLAST of EWM30020.1 vs. NCBI_GenBank
Match: gi|1028896521|gb|OAK98778.1| (formamidopyrimidine-dna glycosylase [Stagonospora sp. SRC1lsM3a])

HSP 1 Score: 196.438 bits (498), Expect = 1.287e-54
Identity = 133/432 (30.79%), Postives = 212/432 (49.07%), Query Frame = 0
Query:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGK--ADEQEVHRSMEGRVLTAVGRRGKHLWMELCDSFPSCSQGRNHRGSAIPSKASKTMDDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAV--FAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQR-----------------------IKGGRIKDKVEGEVVEEQEKVGKGSRAQSGSTRAKKVIKIEGENNDTE----TSEKERGKRTKPINYGAAAR 401
            MPE+ E++ +   +KK  +G+ +  V T+E          DD+++GK         +++ G+ +    ++GK+ W+ + DS P                            L H GM+G + F +     YR    +  E WPP+  K     +E PK         +AF D RR GRI+++ A   D R  +PLKE  PD  +++  L V   +++L+   +PVKA LLDQ  I  G+GNWV DE++YQA   P +  +   +E+++R+ + + +VC TA  +   S+ FP+DWL   RW+K KK+  G + P G ++ F  VGGRT+AIVPSVQ+                        +GG+ K     E  EEQE     ++A+ G T+A+KV+K E E+ D E     ++K++     P+  G  A+
Sbjct:    1 MPEIAEISRIVHYLKKHAVGKTIEAVKTQE----------DDIIYGKVGTSASAFQKALAGKKILDARQQGKYFWL-VMDSKPHP--------------------------LMHFGMSGWMKFSNDDSAYYRPAKAEEAE-WPPRFWKFVLQLKEDPK-------TEVAFIDARRLGRIRLVDAEAEDMRKTTPLKENGPDPVIDKDILTVEWLSKKLRSKKVPVKALLLDQANI-SGIGNWVGDEIMYQARLHPEQYSNTFSDEQIKRLHDAIMYVCDTAVELLAESDRFPADWLMKHRWSKGKKE--GSKLPTGEKIAFLKVGGRTSAIVPSVQKKTAAVAGDVSEGAEEEADEEVKPKRGGKRKAPAAKE--EEQEMEQAPTKAKRGRTKAEKVVKAEPEDGDEEEAVPVAKKQKKSTNGPVKKGKKAQ 382          
The following BLAST results are available for this feature:
BLAST of EWM30020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112643|gb|EWM30020.1|0.000e+0100.00formamidopyrimidine-dna glycosylase [Nannochlorops... [more]
gi|551624875|ref|XP_005792640.1|6.445e-6240.84putative formamidopyrimidine-DNA glycosylase [Emil... [more]
gi|551581721|ref|XP_005776340.1|1.090e-6140.84putative formamidopyrimidine-DNA glycosylase [Emil... [more]
gi|915153824|ref|XP_013328300.1|1.013e-5832.85DNA-formamidopyrimidine glycosylase [Rasamsonia em... [more]
gi|1027018970|ref|XP_016604971.1|7.656e-5834.25formamidopyrimidine-DNA glycosylase [Spizellomyces... [more]
gi|953422087|ref|XP_014553115.1|2.601e-5633.61hypothetical protein COCVIDRAFT_29633 [Bipolaris v... [more]
gi|928527638|ref|XP_014082616.1|8.214e-5633.88hypothetical protein COCC4DRAFT_30449 [Bipolaris m... [more]
gi|915062619|ref|XP_013272154.1|1.112e-5534.75formamidopyrimidine-DNA glycosylase [Rhinocladiell... [more]
gi|628223958|ref|XP_007715307.1|1.259e-5433.33hypothetical protein COCCADRAFT_7568 [Bipolaris ze... [more]
gi|1028896521|gb|OAK98778.1|1.287e-5430.79formamidopyrimidine-dna glycosylase [Stagonospora ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna654rna654Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications