EWM24145.1, cds6527 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585105507|gb|EWM24145.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 903.279 bits (2333), Expect = 0.000e+0 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0 Query: 1 MDIAMEGGSKDAGGSSLSAGIGSDGQVVGMSSMSRAMNFFSPSPDPDWPFCSPAGLLYESGLVCPVMQVSAMILMRSPPDFEKLTSEHHCPNPEGALPMELEALNGKDGQGSMPMMIPPELWENQNVYFLKDPGGWKWPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWASLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQGVQEAGELCSVDFMDSMTARFPNLEGSPVEGDLVHAGAVAGRGGGMGESPSMWDGFMGRGGRLRKT 435 MDIAMEGGSKDAGGSSLSAGIGSDGQVVGMSSMSRAMNFFSPSPDPDWPFCSPAGLLYESGLVCPVMQVSAMILMRSPPDFEKLTSEHHCPNPEGALPMELEALNGKDGQGSMPMMIPPELWENQNVYFLKDPGGWKWPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWASLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQGVQEAGELCSVDFMDSMTARFPNLEGSPVEGDLVHAGAVAGRGGGMGESPSMWDGFMGRGGRLRKT Sbjct: 1 MDIAMEGGSKDAGGSSLSAGIGSDGQVVGMSSMSRAMNFFSPSPDPDWPFCSPAGLLYESGLVCPVMQVSAMILMRSPPDFEKLTSEHHCPNPEGALPMELEALNGKDGQGSMPMMIPPELWENQNVYFLKDPGGWKWPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWASLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQGVQEAGELCSVDFMDSMTARFPNLEGSPVEGDLVHAGAVAGRGGGMGESPSMWDGFMGRGGRLRKT 435
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|553183716|ref|XP_005853950.1| (hypothetical protein NGA_0436400, partial [Nannochloropsis gaditana CCMP526] >gi|422295111|gb|EKU22410.1| hypothetical protein NGA_0436400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 273.092 bits (697), Expect = 3.213e-88 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 Query: 272 MPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQGVQEAGELCSVDFMDSMTARFPNLEGSPVE 399 MPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQGVQEAGELCSVDFMDSMTARFPNLEGSPVE Sbjct: 1 MPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQGVQEAGELCSVDFMDSMTARFPNLEGSPVE 128
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585109275|gb|EWM27098.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 112.079 bits (279), Expect = 3.894e-23 Identity = 101/400 (25.25%), Postives = 153/400 (38.25%), Query Frame = 0 Query: 47 DWPFCSPAGLLYESGLVCPVMQVSAMILMRSPPDF-------EKLTSEHHCPNPEGALPMELEAL---------------------------------NGKD-GQGSMPMMIPPELWENQNVYFLKDPGGW-------KWPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYG-------------------------QCGWASLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIE---NPDNL----ESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYF 366 ++P CS L E GL+C + + PP + P P L M L AL G D Q M + P W NQ Y L+ G + P SFTR++ M+V+ RGT++ W+ +FQ +A TA +PG VH G SLGG++ + A + +++ V+FG+P VGD TF+ NA V R + G G G +Y +GD I+Q+P + P M ++ +P ES+ + G+VPF + ++N W + + FR P +A H CSY C+T+ + GD+ +C F Sbjct: 104 EFPACSIQAALNEDGLICLAGSLWLALTQTLPPQLGWGSKIRPPVDPLRELPQPLEVLSMPLPALVPTEKVEAEKPTYYFLYRAIQNLYAAVGANARSRGTDSAQEPMLNLALPPAWTNQREYTLRWTGSLVAGVLQPQAPFAVSFTRDKEMLVVVRGTIYSAEWQRNFQYQHADPTETAAYRMPGGVHAGFFAVFKDLAEALVDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPRTQVELVSFGAPNVGDATFSSAFNARVRNRHLAFSGVG------SEGDSYFIGDWISQVPCGAVT-TCPLLTEMSSVDLNGSPSGQRQANESYSYTALGGSVPFTPAQMQNGRTWALRSD----VAGFRYSP---VAAHTCSYMCFTAPSVGDAYDQCVF 489
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|553180277|ref|XP_005853377.1| (class 3 [Nannochloropsis gaditana CCMP526] >gi|553191614|ref|XP_005855413.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422293644|gb|EKU20944.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422295682|gb|EKU22981.1| class 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.531 bits (262), Expect = 1.872e-21 Identity = 79/278 (28.42%), Postives = 119/278 (42.81%), Query Frame = 0 Query: 119 PELWENQNVYFLKDPGGWKWPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAA--ATARRGLPGRVHYGQCGWA-------------------------SLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRA--VYVGSGQLNE-PVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYF 366 P + +Q + F G PIGQSF + +VV+ RGT+F D YA + GL GR+H G A SLG A Q+ + L L ++ FG+P GD F + NA +NLR +Y+G+G + PV +G+GD+I Q C+ + +NPD + ++ G V FY++D+ NT+ W + + + + ACH CSY CW+ + D + RCYF Sbjct: 91 PRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVP----FGIGDIIPQALSLCWPV-----RGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVD-------QVVTLDSSPSACHGCSYLCWSVQGLDDPEDRCYF 352
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585108504|gb|EWM26457.1| (class 3 [Nannochloropsis gaditana]) HSP 1 Score: 105.916 bits (263), Expect = 4.836e-21 Identity = 79/278 (28.42%), Postives = 118/278 (42.45%), Query Frame = 0 Query: 119 PELWENQNVYFLKDPGGWKWPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAA--ATARRGLPGRVHYGQCGWA-------------------------SLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRA--VYVGSGQLNE-PVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYF 366 P + +Q + F G PIGQSF + +VV+ RGT+F D YA + GL GR+H G A SLG A Q+ + L L ++ FG+P GD F + NA +NLR +Y+G+G + PV +G+GD+I Q C+ + +NPD + ++ G V FY++D+ NT+ W + + + ACH CSY CW+ + D + RCYF Sbjct: 229 PRGYHSQRLIFTSSNGTKDPPIGQSFVKGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRLHKGFFSEALTLTQQIEMGLDAHPTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQFNALLNLRARSFMYIGNGLVTSAPVP----FGIGDIIPQALSLCWPV-----RGCPGTQNPDMNAAIKYEATGGIVAFYSTDMPNTQEWNRVDQVV-------TLDSSPSACHGCSYLCWSVQGLDDPEDRCYF 490
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585101028|gb|EWM21025.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 106.301 bits (264), Expect = 5.976e-21 Identity = 86/309 (27.83%), Postives = 132/309 (42.72%), Query Frame = 0 Query: 124 NQNVYFL-KDPGGWKWPIGQSFTR-------------EQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWASLGGAISQVAAA----------------------------FLVKHHRHLKIDCVTFGSPQVGDRTFTD-FLNANVNLRRAVYVGSGQLNEPVQRG----------LNYGMGDVITQMPLACYNLS------IPFCESMKFIENPDNLESFQFVMAAGNVPFYASDL---RNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTS---EATGDSDTRCYFP 367 NQ + +L ++ + PIGQ+FT E +VV+ RGT+F W ++F+ A+ G+ G + + +A + Q+ AA + + H L++ VTFG+P V D F + + +NLR+ Y+GSG L P +RG ++G+GD+ QMP C +S P +S D + Q A G+V +A DL + + WL E+F A D G +A H+C+YACW S E +TRCYFP Sbjct: 350 NQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAI-IPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLL-PPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDA--GLIATHVCAYACWVSTGGEGAAGEETRCYFP 654
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585109778|gb|EWM27512.1| (lipase class 3 [Nannochloropsis gaditana]) HSP 1 Score: 105.145 bits (261), Expect = 7.458e-21 Identity = 85/297 (28.62%), Postives = 121/297 (40.74%), Query Frame = 0 Query: 108 DGQGSMPMMIPPELWENQNVY---FLKDPG-GWK------WPIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGW------------------------ASLGGAISQVAAAFLVKHHRHL-KIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLNYGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQ 369 D Q +P ++ E W+ + Y +LK WK PI S + RM+V+ RGT++ W DFQ +A PGR H G SLG I+ + L +H ++D + FG P GD F D VN R +++G G P Y GD+ Q Y P C+ + P +++++V VPFY D+ N + W N R+ + +A HICSY CWTS A GD D+RCYF + Sbjct: 182 DMQSILPKLV--EDWDRERWYMVDYLKQTNINWKNIPHRQSPIAVSMMKGDRMMVVIRGTIWTEEWCKDFQYRWADDEDGL---FPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVLVTGHSLGAGIANMIGLRLENSLQHKPRVDVIGFGGPNTGDTDFADIYRRTVNSRHLIFLGHGSSPNPNM----YTAGDITAQYTCEPY----PGCDVLA--TGPFG-KTYKYVRPHNQVPFYPEDMPNPKTW----NDIANVRRIIPSTKRVIASHICSYICWTSLAVGDLDSRCYFASE 458
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|553188297|ref|XP_005854770.1| (lipase-related protein [Nannochloropsis gaditana CCMP526] >gi|422294286|gb|EKU21586.1| lipase-related protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 85.1149 bits (209), Expect = 3.509e-14 Identity = 96/448 (21.43%), Postives = 162/448 (36.16%), Query Frame = 0 Query: 49 PFCSPAGLLYESGLVCPVMQVSAMILMRSPPDFEKLTSEHHCPNPE--GALPMELEALNGKDGQGSMPMMIPPELW--ENQNVY-------------------------------FLKDPG-----GWKW---------PIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWA------------------------SLGGAISQVAAAFLVKHH------------------------------------RHLKIDCVTF---GSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLN--YGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGD--SDTRCYFPG--QGVQEAGELC 378 P C+ G L + VCPV++ + +PP + + P+PE LP L +P +I E+ E +Y F PG GW+ P + + + +VV+ RG+ W +F + A + A G+PGRVH G + S+GGA+S + A+L + + +H +TF G+P+VGD F+ F +VN R ++GSG G N + +GD + Q+P C+ +P C + E++ + G + + N +GW+++ N+ F+ +G +A H+CSY CW + ++CYFP + V A ++C Sbjct: 108 PTCAVIGFLLRTVPVCPVVRQLEKYFLGTPPSLNQFFANTLVPSPEMNAYLPKPLAVY-----PSMLPDIIDEEVADAERHTIYWYYAMVALAWRNMADILRPEEARAAGRPAQTFEAYPGWHLADGWETGRLIESQSGPFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCF--PVPDCVG-------GSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWL---GDFKIGFKGMVATHMCSYWCWATRGLPPPYEGSKCYFPSDVKHVGPATDIC 538
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585101868|gb|EWM21613.1| (lipase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 82.4185 bits (202), Expect = 3.104e-13 Identity = 94/415 (22.65%), Postives = 152/415 (36.63%), Query Frame = 0 Query: 48 WPFCSPAGLLYESGLVCPVMQVSAMILMRSPPDFEKLTSEHHCPNPEGALPMELEALNGKDGQGSMPMMIPPELWENQNVYFLKD--------------------PG--------------GWKW---PIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLP---GRVHYGQCGW------------------------ASLGGAISQVAAAFL---------VKHH-----RHLKIDCVTFGSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQR-GLNYGMGDVITQMPLACYNLSIPFC-------ESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTSEATGDSDTRCYFPGQ-GVQEAG 375 +P+ L VCP++ I+ + P T++ + NP+G LP + L G D I E VY + D PG G +W P ++ ++V RGTM+ + +++ S +P G+VH G S+GG I+ + A+L VK + ++++ +T G+ GDR F + +N+R Y+G G + + + G Y MGDV+ Q P + +P C E++ + + F + M V Y + ++NT W K N AR + H C Y CW ++ GD +TRCYF Q VQ+ G Sbjct: 166 FPWAGVIEFLVSVNAVCPIVDFVETIVAVNLPSVRIQTTQEYPQNPDGTLPRPWKDLKGCDAWFVDEDTIRAEKASYYYVYRMYDTFYAYATDTAEDKELLDPLAPGWGPQTVHFRNATSVGGQWRESPFSVVTEKDGHVLVAMRGTMY----QDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWIEDGLDAPGKMYTMGDVVAQAP----GVPLPTCMHSSSGNETLWGVHK--DAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLDPARM------AVVLSHKCPYTCWLTDGMGDPNTRCYFQEQREVQQQG 564
BLAST of EWM24145.1 vs. NCBI_GenBank
Match: gi|585110050|gb|EWM27768.1| (lipase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 76.6406 bits (187), Expect = 7.926e-12 Identity = 63/279 (22.58%), Postives = 109/279 (39.07%), Query Frame = 0 Query: 139 PIGQSFTREQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRVHYGQCGWA------------------------SLGGAISQVAAAFLVKHH------------------------------------RHLKIDCVTF---GSPQVGDRTFTDFLNANVNLRRAVYVGSGQLNEPVQRGLN--YGMGDVITQMPLACYNLSIPFCESMKFIENPDNLESFQFVMAAGNVPFYASDLRNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACW 352 P + + + +VV+ RG+ W +F + A + A G+PGRVH G + S+GGA+S + A+L + + +H +TF G+P+VGD F+ F +VN R ++GSG G N + +GD + Q+P C+ +P C + E++ + G + + N +GW+++ N+ F+ +G +A H+CSY CW Sbjct: 53 PFAVTMAKNRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGIRFRGKAVGFNMVWEIGDFVVQVPWDCF--PVPDCVG-------GSTETYMYSYHGGLIKITPRMMPNEDGWMEEANWL---GDFKIGFKGMVATHMCSYWCW 319 The following BLAST results are available for this feature:
BLAST of EWM24145.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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