EWM24161.1, cds6508 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|585105532|gb|EWM24161.1| (glutaredoxin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 315.079 bits (806), Expect = 9.483e-109 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 Query: 1 MRVLFFTCTLLLSLQSILGFLIPPAPSPRPRISSSFPLRSSMAPGDEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAELKK 155 MRVLFFTCTLLLSLQSILGFLIPPAPSPRPRISSSFPLRSSMAPGDEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAELKK Sbjct: 1 MRVLFFTCTLLLSLQSILGFLIPPAPSPRPRISSSFPLRSSMAPGDEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAELKK 155
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|504936846|ref|WP_015123948.1| (glutaredoxin [Synechococcus sp. PCC 6312] >gi|427376452|gb|AFY60404.1| monothiol glutaredoxin, Grx4 family [Synechococcus sp. PCC 6312]) HSP 1 Score: 148.673 bits (374), Expect = 1.041e-43 Identity = 69/101 (68.32%), Postives = 86/101 (85.15%), Query Frame = 0 Query: 52 SAAVE-KIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLA 151 SA V+ KI SLV +NK+M+FMKGSKL PQCGFSNTAV IL + A FETFDVL+DY VR+ IK+YS+WPTIPQ Y+NGEFVGGSDIL+E+++ GEL++ +A Sbjct: 2 SADVQAKIDSLVKSNKIMVFMKGSKLMPQCGFSNTAVQILNSLGAPFETFDVLADYEVRQGIKDYSNWPTIPQIYINGEFVGGSDILIELYQKGELQEMVA 102
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|551550939|ref|XP_005762961.1| (hypothetical protein EMIHUDRAFT_78687 [Emiliania huxleyi CCMP1516] >gi|551624821|ref|XP_005792613.1| glutaredoxin [Emiliania huxleyi CCMP1516] >gi|485612147|gb|EOD10532.1| hypothetical protein EMIHUDRAFT_78687 [Emiliania huxleyi CCMP1516] >gi|485646828|gb|EOD40184.1| glutaredoxin [Emiliania huxleyi CCMP1516]) HSP 1 Score: 142.124 bits (357), Expect = 4.091e-41 Identity = 61/91 (67.03%), Postives = 78/91 (85.71%), Query Frame = 0 Query: 56 EKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGEL 146 ++IK++V NK+ LFMKGSKLFPQCGFSNTAV IL + + E+ETFDVL+D VR+ +K YS+WPTIPQCY+ GEFVGG D+L+EM++SGEL Sbjct: 6 DRIKAMVEGNKIFLFMKGSKLFPQCGFSNTAVQILNSYNVEYETFDVLADNAVRDGVKTYSNWPTIPQCYIEGEFVGGCDLLIEMYQSGEL 96
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|1210260279|dbj|BAZ79274.1| (glutaredoxin-like protein [Sphaerospermopsis kisseleviana NIES-73]) HSP 1 Score: 142.124 bits (357), Expect = 4.757e-41 Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 0 Query: 56 EKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 150 EKI +L+ NNK+M+FMKG+KL PQCGFSN AV I A FETFDVLSDY VR+ IK YS WPTIPQ Y+NGEF+GGSDIL EM++ GEL++ + Sbjct: 7 EKIDNLIKNNKIMVFMKGTKLMPQCGFSNNAVQIFNALGVPFETFDVLSDYEVRQGIKEYSEWPTIPQIYINGEFLGGSDILYEMYQKGELQEKV 101
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|822632383|ref|WP_047006252.1| (monothiol glutaredoxin, Grx4 family [Erythrobacter gangjinensis] >gi|822588049|gb|KLE33404.1| glutaredoxin [Erythrobacter gangjinensis] >gi|1108535299|gb|APE26951.1| putative monothiol glutaredoxin ycf64-like [Erythrobacter gangjinensis]) HSP 1 Score: 140.584 bits (353), Expect = 2.030e-40 Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 0 Query: 56 EKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAE 152 E+I +VG+N V+LFMKG+ LFPQCGFSN AVSIL C +FE+ DVL D VR+ IK YS WPTIPQ YV GEFVGGSDI++EM+E+GEL++ L E Sbjct: 10 ERISQIVGDNDVVLFMKGTPLFPQCGFSNRAVSILDHCKVQFESVDVLQDMEVRQGIKAYSDWPTIPQLYVKGEFVGGSDIMMEMYEAGELQQMLDE 106
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|676378199|ref|XP_009032378.1| (hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens] >gi|323456862|gb|EGB12728.1| hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens]) HSP 1 Score: 141.739 bits (356), Expect = 2.397e-40 Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 0 Query: 20 FLIPPAPSPRPRISSSFPLRSSMAPGDEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 150 F+ P A +PR L A D A ++I+S+V +N VMLFMKG+K+FPQCGFSN AV IL A +FET+D LSD VR IK +S WPTIPQ YV+GEFVGGSDI+LEM+E+GEL++ + Sbjct: 18 FVAPGAAAPR--------LSPRRAGDDVEPPPDATTKRIQSMVDDNTVMLFMKGTKIFPQCGFSNMAVQILNAIGQDFETYDCLSDENVRSTIKEFSDWPTIPQLYVDGEFVGGSDIMLEMYEAGELQEMI 140
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|502956678|ref|WP_013191654.1| (glutaredoxin [Trichormus azollae] >gi|298233502|gb|ADI64638.1| glutaredoxin-like protein ['Nostoc azollae' 0708]) HSP 1 Score: 140.198 bits (352), Expect = 3.119e-40 Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 0 Query: 56 EKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 150 EKI +LV NK+M+FMKG+KL PQCGFSN V IL FETFDVLSD +R+ IK YS WPTIPQ Y+NGEFVGGSDIL+EM++ GEL++T+ Sbjct: 7 EKIDNLVQQNKIMVFMKGNKLMPQCGFSNNVVQILNTLGVPFETFDVLSDSEIRQGIKEYSEWPTIPQVYINGEFVGGSDILIEMYQKGELQQTV 101
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|748154451|ref|WP_039728777.1| (monothiol glutaredoxin, Grx4 family [Lyngbya confervoides] >gi|746958800|gb|KIF16339.1| glutaredoxin [Aphanocapsa montana BDHKU210001] >gi|746985571|gb|KIF41263.1| glutaredoxin [Lyngbya confervoides BDU141951]) HSP 1 Score: 139.813 bits (351), Expect = 3.294e-40 Identity = 59/95 (62.11%), Postives = 80/95 (84.21%), Query Frame = 0 Query: 56 EKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 150 E+I++L+ +NK+M+FMKG+KL PQCGFSN V IL FETFDVLSDY VR+ IK YS+WPTIPQ Y+NGEF+GGSDIL+E++++G+L++T+ Sbjct: 7 ERIETLINDNKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPFETFDVLSDYDVRQGIKEYSNWPTIPQVYLNGEFLGGSDILIELYQNGQLQETV 101
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|1194459177|gb|OUC12816.1| (monothiol glutaredoxin, Grx4 family [Alkalinema sp. CACIAM 70d]) HSP 1 Score: 138.272 bits (347), Expect = 1.643e-39 Identity = 57/95 (60.00%), Postives = 77/95 (81.05%), Query Frame = 0 Query: 56 EKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 150 ++I LV N+K+M+FMKG+KL PQCGFSN V IL FETFDVLSDY +R+ IK+YS+WPTIPQ Y+NGEF+GGSDI++E+++ GEL++ + Sbjct: 7 QRIDDLVNNHKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPFETFDVLSDYEIRQGIKDYSNWPTIPQVYMNGEFIGGSDIMIELYQKGELQQMV 101
BLAST of EWM24161.1 vs. NCBI_GenBank
Match: gi|1100946051|ref|WP_071455475.1| (monothiol glutaredoxin, Grx4 family [Gloeomargarita lithophora] >gi|1100594552|gb|APB35138.1| Glutaredoxin-related protein [Gloeomargarita lithophora Alchichica-D10]) HSP 1 Score: 138.272 bits (347), Expect = 1.716e-39 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 0 Query: 57 KIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLA 151 +I LV +K+M+FMKGSKL PQCGFSN V IL A A +ET DVLSDY +R+ IK YS WPTIPQ Y+NGEF+GGSDIL+EM++SGEL++ +A Sbjct: 8 RISELVKAHKIMVFMKGSKLMPQCGFSNNVVQILNAVGAVYETCDVLSDYEIRQGIKEYSQWPTIPQVYINGEFLGGSDILIEMYQSGELQEKVA 102 The following BLAST results are available for this feature:
BLAST of EWM24161.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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