EWM24164.1, cds6507 (CDS) Nannochloropsis gaditana

Overview
NameEWM24164.1
Unique Namecds6507
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:718880..718911 +
Alignment locationCM002468.1:719080..719569 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24164.1
Productprogestin and adipoq receptor family member 3-like protein
Orig transcript idgnl|cribi|Naga_100532g1.2620.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:718880..718911 +
CM002468.1supercontigCM002468.1:719080..719569 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR004254AdipoR/HlyIII-related
Homology
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|585105535|gb|EWM24164.1| (progestin and adipoq receptor family member 3-like protein [Nannochloropsis gaditana])

HSP 1 Score: 345.125 bits (884), Expect = 4.048e-120
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADGD 173
            MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADGD
Sbjct:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADGD 173          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|146104884|ref|XP_001469933.1| (conserved hypothetical protein [Leishmania infantum JPCM5] >gi|398025052|ref|XP_003865687.1| hypothetical protein, conserved [Leishmania donovani] >gi|134074303|emb|CAM73049.1| conserved hypothetical protein [Leishmania infantum JPCM5] >gi|322503924|emb|CBZ39010.1| hypothetical protein, conserved [Leishmania donovani])

HSP 1 Score: 90.8929 bits (224), Expect = 1.537e-18
Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCV 166
            +D  GI  L+ GS++P   YA  C P W++ Y ++     L G  G  F        +  + + +  +VG G++P++H   ++P HI   ++  LL M   YGVG F ++ R PE L      +  +FD  FSSHQ+WHLC+  A  T     +  + +   + CV
Sbjct:  204 LDYYGITFLVVGSFLPFCFYAMSCAPEWRNAYLSMIGSFGLAGFIGPFFRHWTSEAFATKKIIFYVCMVGSGIIPTIHLSQMIPLHISGPYVKGLLTMLALYGVGVFIYAFRIPEAL------SPGTFDFYFSSHQIWHLCVLGAATTHFYNCVAMYLSRETIVCV 363          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1158832251|ref|XP_020334982.1| (progestin and adipoQ receptor family member 3-like [Oncorhynchus kisutch] >gi|1158832253|ref|XP_020334983.1| progestin and adipoQ receptor family member 3-like [Oncorhynchus kisutch])

HSP 1 Score: 87.8113 bits (216), Expect = 1.810e-18
Identity = 50/175 (28.57%), Postives = 85/175 (48.57%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADG 172
            +D  GI++ I G Y+PG+ YAF C   W+ +Y  +   L+L           H       RT+ F  + G+G++P++HW  L     + +  +FL  ++ M+L  G  F F+ S+ PER F  +       + L +SHQ+WH+ + F  Y W +  +   +  H+  C  L  + 
Sbjct:   25 LDYAGISVGILGCYIPGVFYAFYCNIFWRQVYLVIVLALILAIFLAQIHPHYHSKEWQHLRTVIFCSVAGYGVIPAVHWVWLNGGFSSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFMFYWWHQTAVYIMNFRHNQPCPPLYTNS 193          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|401420840|ref|XP_003874909.1| (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322491145|emb|CBZ26410.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103])

HSP 1 Score: 89.7373 bits (221), Expect = 4.737e-18
Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCV 166
            +D  GI  L+ GS++P   Y   C P W++ Y ++     ++G  G  F        +  + + +  +VG G++P++H   ++P HI   ++  LL M   YGVG F ++ R PE L      +  +FD  FSSHQ+WHLC+  A  T     +  + +   L CV
Sbjct:  204 LDYYGITFLVVGSFLPFCFYTMSCAPEWRNAYLSMIGSFGVVGFIGPFFRHWTSEAFATKKIIFYVCMVGSGIIPTIHLSQMIPLHISGPYVKGLLTMLALYGVGVFVYAFRIPEAL------SPGTFDFYFSSHQIWHLCVLGAATTHFYNCVAMYLSRETLVCV 363          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|929236671|ref|XP_013994172.1| (PREDICTED: progestin and adipoQ receptor family member 3-like isoform X1 [Salmo salar])

HSP 1 Score: 88.5817 bits (218), Expect = 7.336e-18
Identity = 49/168 (29.17%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGC 165
            +D  GI++ I G Y+PG+ YAF C   W+ +Y  +   L+L                   RT  F F+ G+G++P++HW  L     + +  +FL  ++ M+L  G  F F+ S+ PER F  +       + L +SHQ+WH+ + F  Y W +  +   +  H+  C
Sbjct:  145 LDYAGISVGILGCYIPGVFYAFYCITFWRQVYLVIVLALILAIFSAQIHPHYLSKEWQHLRTTIFCFVAGYGVIPAIHWVWLNGGFSSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFMFYWWHQTAVYIMNFRHNQPC 306          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|157877645|ref|XP_001687137.1| (conserved hypothetical protein [Leishmania major strain Friedlin] >gi|68130212|emb|CAJ09523.1| conserved hypothetical protein [Leishmania major strain Friedlin])

HSP 1 Score: 88.9669 bits (219), Expect = 8.521e-18
Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCV 166
            +D  GI  L+ GS++P   YA  C P W++ Y ++     L+G  G  F        +  + + +  +VG G++P++H   ++P HI    +  LL M   YGVG F ++ R PE L      +  +FD  FSSHQ+WHLC+  A  T     +  + +   + CV
Sbjct:  204 LDYYGITFLVVGSFLPFCFYAMSCAPAWRNAYLSMIGSFGLVGFIGPFFRHWTSEAFAKKKIIFYVCMVGSGIIPTIHLSQMIPLHISGPHVKGLLTMLALYGVGVFIYAFRIPEAL------SPGTFDFYFSSHQIWHLCVLGAATTHFYNCVAMYLSRETIVCV 363          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1211248426|ref|XP_021478361.1| (progestin and adipoQ receptor family member 3-like isoform X3 [Oncorhynchus mykiss])

HSP 1 Score: 86.2705 bits (212), Expect = 1.262e-17
Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEG---ILEFHHA 159
            +D VGI++ I G Y+PG+ YAF C   W+ +Y      L+L           H       RT  F  + G+G++P+ HW  L   + + +  +FL  ++ M+L  G  F F+ S+ PER F  +       + L +SHQ+WH+ + F +Y W +    I++F H+
Sbjct:   53 LDFVGISVGILGCYIPGVFYAFYCITFWRQVYLVTALALILAVFLAQIHPHYHSKEWRHQRTAIFCSVAGYGIIPAGHWVWLNEGLGSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFLLYWWHQTAVYIMKFRHS 211          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|974087361|ref|XP_015241772.1| (PREDICTED: progestin and adipoQ receptor family member 3-like [Cyprinodon variegatus])

HSP 1 Score: 87.4261 bits (215), Expect = 1.747e-17
Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQ-----SLFRTLTFAFLVGFGLVPSLHWCLLVP---AHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLE---GILEFHHA 159
            +D  GI++ I G YVPGI YAF C   W+ +Y     LL +L L  A F     PR       + R   F  + G G++P+ HW  L     + I  +FL  ++GM+L  G  F F++++ PER F  +       + + +SHQLWH+ +    Y W +   GI++F H+
Sbjct:  145 LDYAGISVGILGCYVPGIFYAFYCNAFWRQVY-----LLTVLSLILAVFCAQVHPRYLSNDWKVIRMSIFCCVAGIGVIPACHWIWLSEGFASDIVQLFLPRVIGMYLIAGSAFLFYATKIPERYFPGQ------VNYIGASHQLWHILVVLMFYWWHQTAVGIMDFRHS 303          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1025122591|ref|XP_016413042.1| (PREDICTED: progestin and adipoQ receptor family member 3-like [Sinocyclocheilus rhinocerous] >gi|1025122596|ref|XP_016413043.1| PREDICTED: progestin and adipoQ receptor family member 3-like [Sinocyclocheilus rhinocerous])

HSP 1 Score: 87.0409 bits (214), Expect = 2.030e-17
Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQ-SLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADG 172
            +D  GI++ I G YVPG+ YAF C   W+ +Y  LT L L+L +  A     +  +Q    R++ F  + G+G++P+ HW  L     + I  +F   ++ M+L     F F+ S+ PER F  +       + L +SHQLWH+ +    Y W +  +      H+L C    + G
Sbjct:  143 LDYAGISVGILGCYVPGVFYAFYCNSFWRQVY-LLTVLALILAVFAAQIHPLYLTQQWKKLRSVMFCSVAGYGVIPACHWVWLNGGFDSEIVKVFFPRVMIMYLIAASAFLFYVSKIPERYFPGQ------LNYLGASHQLWHVLVVVMFYWWHQTAIYIMKYRHNLPCTDYSSHG 311          
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1158873028|ref|XP_020340433.1| (progestin and adipoQ receptor family member 3-like isoform X1 [Oncorhynchus kisutch])

HSP 1 Score: 86.6557 bits (213), Expect = 3.142e-17
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0
Query:    1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADG 172
            +D VGI++ I G Y+PG+ YAF C   W+ +Y      L+L           H       RT  F  + G+G++P+ HW  L   + + +  +FL  ++ M+L  G  F F+ S+ PER F  +       + L +SHQ+WH+ + F  Y W +  +   +  H+  C  L  + 
Sbjct:  145 LDFVGISVGILGCYIPGVFYAFYCITFWRQVYLVTALALILAVFLAQIHPHYHSKEWRHQRTAIFCSVAGYGIIPAGHWVWLNEGLGSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFMFYWWHQTAVYIMNFRHNQPCPPLYTNS 313          
The following BLAST results are available for this feature:
BLAST of EWM24164.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105535|gb|EWM24164.1|4.048e-120100.00progestin and adipoq receptor family member 3-like... [more]
gi|146104884|ref|XP_001469933.1|1.537e-1831.33conserved hypothetical protein [Leishmania infantu... [more]
gi|1158832251|ref|XP_020334982.1|1.810e-1828.57progestin and adipoQ receptor family member 3-like... [more]
gi|401420840|ref|XP_003874909.1|4.737e-1830.72conserved hypothetical protein [Leishmania mexican... [more]
gi|929236671|ref|XP_013994172.1|7.336e-1829.17PREDICTED: progestin and adipoQ receptor family me... [more]
gi|157877645|ref|XP_001687137.1|8.521e-1831.33conserved hypothetical protein [Leishmania major s... [more]
gi|1211248426|ref|XP_021478361.1|1.262e-1730.91progestin and adipoQ receptor family member 3-like... [more]
gi|974087361|ref|XP_015241772.1|1.747e-1733.53PREDICTED: progestin and adipoQ receptor family me... [more]
gi|1025122591|ref|XP_016413042.1|2.030e-1730.68PREDICTED: progestin and adipoQ receptor family me... [more]
gi|1158873028|ref|XP_020340433.1|3.142e-1729.14progestin and adipoQ receptor family member 3-like... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6523rna6523Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications