EWM24164.1, cds6507 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|585105535|gb|EWM24164.1| (progestin and adipoq receptor family member 3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 345.125 bits (884), Expect = 4.048e-120 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADGD 173
MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADGD
Sbjct: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADGD 173
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|146104884|ref|XP_001469933.1| (conserved hypothetical protein [Leishmania infantum JPCM5] >gi|398025052|ref|XP_003865687.1| hypothetical protein, conserved [Leishmania donovani] >gi|134074303|emb|CAM73049.1| conserved hypothetical protein [Leishmania infantum JPCM5] >gi|322503924|emb|CBZ39010.1| hypothetical protein, conserved [Leishmania donovani]) HSP 1 Score: 90.8929 bits (224), Expect = 1.537e-18 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCV 166
+D GI L+ GS++P YA C P W++ Y ++ L G G F + + + + +VG G++P++H ++P HI ++ LL M YGVG F ++ R PE L + +FD FSSHQ+WHLC+ A T + + + + CV
Sbjct: 204 LDYYGITFLVVGSFLPFCFYAMSCAPEWRNAYLSMIGSFGLAGFIGPFFRHWTSEAFATKKIIFYVCMVGSGIIPTIHLSQMIPLHISGPYVKGLLTMLALYGVGVFIYAFRIPEAL------SPGTFDFYFSSHQIWHLCVLGAATTHFYNCVAMYLSRETIVCV 363
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1158832251|ref|XP_020334982.1| (progestin and adipoQ receptor family member 3-like [Oncorhynchus kisutch] >gi|1158832253|ref|XP_020334983.1| progestin and adipoQ receptor family member 3-like [Oncorhynchus kisutch]) HSP 1 Score: 87.8113 bits (216), Expect = 1.810e-18 Identity = 50/175 (28.57%), Postives = 85/175 (48.57%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADG 172
+D GI++ I G Y+PG+ YAF C W+ +Y + L+L H RT+ F + G+G++P++HW L + + +FL ++ M+L G F F+ S+ PER F + + L +SHQ+WH+ + F Y W + + + H+ C L +
Sbjct: 25 LDYAGISVGILGCYIPGVFYAFYCNIFWRQVYLVIVLALILAIFLAQIHPHYHSKEWQHLRTVIFCSVAGYGVIPAVHWVWLNGGFSSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFMFYWWHQTAVYIMNFRHNQPCPPLYTNS 193
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|401420840|ref|XP_003874909.1| (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322491145|emb|CBZ26410.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]) HSP 1 Score: 89.7373 bits (221), Expect = 4.737e-18 Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCV 166
+D GI L+ GS++P Y C P W++ Y ++ ++G G F + + + + +VG G++P++H ++P HI ++ LL M YGVG F ++ R PE L + +FD FSSHQ+WHLC+ A T + + + L CV
Sbjct: 204 LDYYGITFLVVGSFLPFCFYTMSCAPEWRNAYLSMIGSFGVVGFIGPFFRHWTSEAFATKKIIFYVCMVGSGIIPTIHLSQMIPLHISGPYVKGLLTMLALYGVGVFVYAFRIPEAL------SPGTFDFYFSSHQIWHLCVLGAATTHFYNCVAMYLSRETLVCV 363
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|929236671|ref|XP_013994172.1| (PREDICTED: progestin and adipoQ receptor family member 3-like isoform X1 [Salmo salar]) HSP 1 Score: 88.5817 bits (218), Expect = 7.336e-18 Identity = 49/168 (29.17%), Postives = 82/168 (48.81%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGC 165
+D GI++ I G Y+PG+ YAF C W+ +Y + L+L RT F F+ G+G++P++HW L + + +FL ++ M+L G F F+ S+ PER F + + L +SHQ+WH+ + F Y W + + + H+ C
Sbjct: 145 LDYAGISVGILGCYIPGVFYAFYCITFWRQVYLVIVLALILAIFSAQIHPHYLSKEWQHLRTTIFCFVAGYGVIPAIHWVWLNGGFSSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFMFYWWHQTAVYIMNFRHNQPC 306
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|157877645|ref|XP_001687137.1| (conserved hypothetical protein [Leishmania major strain Friedlin] >gi|68130212|emb|CAJ09523.1| conserved hypothetical protein [Leishmania major strain Friedlin]) HSP 1 Score: 88.9669 bits (219), Expect = 8.521e-18 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLLVPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCV 166
+D GI L+ GS++P YA C P W++ Y ++ L+G G F + + + + +VG G++P++H ++P HI + LL M YGVG F ++ R PE L + +FD FSSHQ+WHLC+ A T + + + + CV
Sbjct: 204 LDYYGITFLVVGSFLPFCFYAMSCAPAWRNAYLSMIGSFGLVGFIGPFFRHWTSEAFAKKKIIFYVCMVGSGIIPTIHLSQMIPLHISGPHVKGLLTMLALYGVGVFIYAFRIPEAL------SPGTFDFYFSSHQIWHLCVLGAATTHFYNCVAMYLSRETIVCV 363
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1211248426|ref|XP_021478361.1| (progestin and adipoQ receptor family member 3-like isoform X3 [Oncorhynchus mykiss]) HSP 1 Score: 86.2705 bits (212), Expect = 1.262e-17 Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEG---ILEFHHA 159
+D VGI++ I G Y+PG+ YAF C W+ +Y L+L H RT F + G+G++P+ HW L + + + +FL ++ M+L G F F+ S+ PER F + + L +SHQ+WH+ + F +Y W + I++F H+
Sbjct: 53 LDFVGISVGILGCYIPGVFYAFYCITFWRQVYLVTALALILAVFLAQIHPHYHSKEWRHQRTAIFCSVAGYGIIPAGHWVWLNEGLGSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFLLYWWHQTAVYIMKFRHS 211
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|974087361|ref|XP_015241772.1| (PREDICTED: progestin and adipoQ receptor family member 3-like [Cyprinodon variegatus]) HSP 1 Score: 87.4261 bits (215), Expect = 1.747e-17 Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQ-----SLFRTLTFAFLVGFGLVPSLHWCLLVP---AHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLE---GILEFHHA 159
+D GI++ I G YVPGI YAF C W+ +Y LL +L L A F PR + R F + G G++P+ HW L + I +FL ++GM+L G F F++++ PER F + + + +SHQLWH+ + Y W + GI++F H+
Sbjct: 145 LDYAGISVGILGCYVPGIFYAFYCNAFWRQVY-----LLTVLSLILAVFCAQVHPRYLSNDWKVIRMSIFCCVAGIGVIPACHWIWLSEGFASDIVQLFLPRVIGMYLIAGSAFLFYATKIPERYFPGQ------VNYIGASHQLWHILVVLMFYWWHQTAVGIMDFRHS 303
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1025122591|ref|XP_016413042.1| (PREDICTED: progestin and adipoQ receptor family member 3-like [Sinocyclocheilus rhinocerous] >gi|1025122596|ref|XP_016413043.1| PREDICTED: progestin and adipoQ receptor family member 3-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 87.0409 bits (214), Expect = 2.030e-17 Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQ-SLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADG 172
+D GI++ I G YVPG+ YAF C W+ +Y LT L L+L + A + +Q R++ F + G+G++P+ HW L + I +F ++ M+L F F+ S+ PER F + + L +SHQLWH+ + Y W + + H+L C + G
Sbjct: 143 LDYAGISVGILGCYVPGVFYAFYCNSFWRQVY-LLTVLALILAVFAAQIHPLYLTQQWKKLRSVMFCSVAGYGVIPACHWVWLNGGFDSEIVKVFFPRVMIMYLIAASAFLFYVSKIPERYFPGQ------LNYLGASHQLWHVLVVVMFYWWHQTAIYIMKYRHNLPCTDYSSHG 311
BLAST of EWM24164.1 vs. NCBI_GenBank
Match: gi|1158873028|ref|XP_020340433.1| (progestin and adipoQ receptor family member 3-like isoform X1 [Oncorhynchus kisutch]) HSP 1 Score: 86.6557 bits (213), Expect = 3.142e-17 Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0
Query: 1 MDLVGIALLIWGSYVPGIHYAFVCFPRWQSLYQTLTFLLLLLGLGGAAFTDTHCPRQSLFRTLTFAFLVGFGLVPSLHWCLL---VPAHIRSIFLDNLLGMFLAYGVGFFFWSSRFPERLFESKKGAAFSFDLLFSSHQLWHLCIFFAVYTWLEGILEFHHALHDLGCVVLRADG 172
+D VGI++ I G Y+PG+ YAF C W+ +Y L+L H RT F + G+G++P+ HW L + + + +FL ++ M+L G F F+ S+ PER F + + L +SHQ+WH+ + F Y W + + + H+ C L +
Sbjct: 145 LDFVGISVGILGCYIPGVFYAFYCITFWRQVYLVTALALILAVFLAQIHPHYHSKEWRHQRTAIFCSVAGYGIIPAGHWVWLNEGLGSAVVQLFLPRVIVMYLIAGAAFLFYISKIPERCFPGQ------LNYLGASHQVWHVLVVFMFYWWHQTAVYIMNFRHNQPCPPLYTNS 313 The following BLAST results are available for this feature:
BLAST of EWM24164.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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