EWM24173.1, cds6504 (CDS) Nannochloropsis gaditana

Overview
NameEWM24173.1
Unique Namecds6504
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:711364..711912 +
Alignment locationCM002468.1:712085..712129 +

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Properties
Property NameValue
Protein idEWM24173.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100296g6.9847.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:711364..711912 +
CM002468.1supercontigCM002468.1:712085..712129 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24173.1 vs. NCBI_GenBank
Match: gi|585105547|gb|EWM24173.1| (hypothetical protein Naga_100296g6 [Nannochloropsis gaditana])

HSP 1 Score: 401.364 bits (1030), Expect = 1.315e-141
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 
Query:    1 MTSSDDSDRATLVRAIDFSLQGDAEARRFLEDLSTPDLSAGIDPLLSLWKVSLDLFTSSPDGTPHAYFIACVLRRNVRQQWDFTPSQTRTQLAKGTWETLIAYAEKRAEIPPQINSSRGVLSTLIADPAVNQLISVVVAQAVAIEDRNGEAHAATRQLISMALSHAGSVNKAQQSLSTGRWKPVRRREASWWWACGH 197
            MTSSDDSDRATLVRAIDFSLQGDAEARRFLEDLSTPDLSAGIDPLLSLWKVSLDLFTSSPDGTPHAYFIACVLRRNVRQQWDFTPSQTRTQLAKGTWETLIAYAEKRAEIPPQINSSRGVLSTLIADPAVNQLISVVVAQAVAIEDRNGEAHAATRQLISMALSHAGSVNKAQQSLSTGRWKPVRRREASWWWACGH
Sbjct:    1 MTSSDDSDRATLVRAIDFSLQGDAEARRFLEDLSTPDLSAGIDPLLSLWKVSLDLFTSSPDGTPHAYFIACVLRRNVRQQWDFTPSQTRTQLAKGTWETLIAYAEKRAEIPPQINSSRGVLSTLIADPAVNQLISVVVAQAVAIEDRNGEAHAATRQLISMALSHAGSVNKAQQSLSTGRWKPVRRREASWWWACGH 197
The following BLAST results are available for this feature:
BLAST of EWM24173.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105547|gb|EWM24173.1|1.315e-141100.00hypothetical protein Naga_100296g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6520rna6520Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications