EWM24187.1, cds6487 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24187.1 vs. NCBI_GenBank
Match: gi|585105572|gb|EWM24187.1| (paired amphipathic helix protein sin3b [Nannochloropsis gaditana]) HSP 1 Score: 2321.97 bits (6016), Expect = 0.000e+0 Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 0 Query: 1 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1197 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL Sbjct: 1 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1197
BLAST of EWM24187.1 vs. NCBI_GenBank
Match: gi|585105571|gb|EWM24186.1| (paired amphipathic helix protein sin3b [Nannochloropsis gaditana]) HSP 1 Score: 2321.97 bits (6016), Expect = 0.000e+0 Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 0 Query: 1 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1197 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL Sbjct: 76 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLPGARGGGEGGSLQGGEEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGVYLEFLRVMRAFQGGEMGIGEVMKRVGRMFQDHPSLLDGFNRFLPPQYRMPAPQGKAPAPAGGWEGGEEDVGEADALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFLPHGYRMPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEFAANFIENVRNRFAADPARYQTFLEVLQRHEEEGKEGGLAETEQLAKTVSELFRGHEDLLKDFAHFLPGPVRAALGLMGPEEDGKLPEGEGGGGEGEGKKPAEEKEEGGEEEMGMADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVKVRVFFAKRPTEGTRLVEALEGAMNVEGGQGGSGSDRKKKWEETKERVMQVAREVLKEEGEESGMRKELEEWMAGKEGEKTKEVGSGDQAGGVVEGAVRGGGGERAEARGKEGGMDVEKGGQAGGEGGRGTGGGRRDGKEEEEVGRGEGGAGKGTEKENSPRGKKRKAGEGDEGEEEVEEEEEGEEEELVIMDEDMTDDEEGKEEGGEKNAGKGAEKEEEGKEGELGGGKGAEEDGGEGDPGIGPKESRKKEASGGEASGDKVDPKGKGKREEEGGREGGRDGGREGGAEETGEEETSGAVGTGEVPALGKEGGREEGGEEGGGPGGGHEGNSPGAVKPSPPTSTPRSSPPSVSPSSGPRKRSLAEVMGKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1272
BLAST of EWM24187.1 vs. NCBI_GenBank
Match: gi|553177672|ref|XP_005852485.1| (transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526] >gi|422296048|gb|EKU23347.1| transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 493.812 bits (1270), Expect = 1.920e-161 Identity = 233/236 (98.73%), Postives = 233/236 (98.73%), Query Frame = 0 Query: 1 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPET 236 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNAL YLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLC QVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPE Sbjct: 76 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKEDVSMEDAVLYMDRVKSAYADKPEV 311 HSP 2 Score: 68.9366 bits (167), Expect = 1.832e-8 Identity = 63/204 (30.88%), Postives = 89/204 (43.63%), Query Frame = 0 Query: 386 PPQYRMPAPQGKAPAPAGGWEGGEEDVGEA---DALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFL-----------------------------PHGYR----MPSVPPSAPPFQRPSPPGVPGRAGSGGGEGSGGGGGEGGGGGDGGEGERDVEF--AANFIENVRNRFAADP 551 PP Y +P AP+PA A +AL +++ V+ TF +P++Y +FL VMR + G T + +V RLF G+++LLRGF FL P GYR PS PPS PPF +PG G+G G EG GGE + DV A +++ V++ +A P Sbjct: 123 PPSYSLPY---NAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPF-------LPG--GNGTRPPLQTGVTEG-----GGEAKEDVSMEDAVLYMDRVKSAYADKP 309 HSP 3 Score: 65.4698 bits (158), Expect = 2.461e-7 Identity = 46/164 (28.05%), Postives = 80/164 (48.78%), Query Frame = 0 Query: 216 MEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPPKGLP------------------GARG----------------GGEGG--SLQGG-EEGGGEGEGEAGQAQMQGAIEFTDQVRATFQNQPGV 342 M++A++Y++ V+ +A +P+ YA FL +++ ++ DT + V+++FQG+D L++GF FL H + PP P G RG GG G LQ G EGGGE + + M+ A+ + D+V++ + ++P V Sbjct: 151 MQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPPSHPPFLPGGNGTRPPLQTGVTEGGGEAKED---VSMEDAVLYMDRVKSAYADKPEV 311
BLAST of EWM24187.1 vs. NCBI_GenBank
Match: gi|553193381|ref|XP_005855765.1| (transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526] >gi|422293306|gb|EKU20606.1| transcriptional repressor sin3p, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 385.956 bits (990), Expect = 1.971e-121 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0 Query: 1 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALAYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCVQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPP 183 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNAL YLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLC QVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPP Sbjct: 76 MASLFANPNSSLPAASSNFQGLYSGSNAHLMNNNASKPGQDWHRGLPPPSYSLPYNAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPPLPSPAPSVPGPASFPHSMGHPSGYRGWNARPSAPP 258 HSP 2 Score: 63.929 bits (154), Expect = 4.701e-7 Identity = 25/73 (34.25%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 216 MEDAVLYMDRVKSAYADKPETYARFLEIIKSFQDELPDTARVLEAVTQIFQGRDDLIQGFNCFLPAAHRLPPP 288 M++A++Y++ V+ +A +P+ YA FL +++ ++ DT + V+++FQG+D L++GF FL H + PP Sbjct: 151 MQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFLSGIHAVDPP 223 HSP 3 Score: 62.7734 bits (151), Expect = 9.487e-7 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0 Query: 386 PPQYRMPAPQGKAPAPAGGWEGGEEDVGEA---DALDFMDRVRSTFTARPEVYVAFLEVMRGFQAGALRTEGVMQEVGRLFAGEEALLRGFNAFL 477 PP Y +P AP+PA A +AL +++ V+ TF +P++Y +FL VMR + G T + +V RLF G+++LLRGF FL Sbjct: 123 PPSYSLPY---NAPSPAFPGRPSMPPSHAALMQNALVYLELVQRTFAHQPDIYASFLSVMREHKEGRRDTPNLCGQVSRLFQGQDSLLRGFQDFL 214
BLAST of EWM24187.1 vs. NCBI_GenBank
Match: gi|553193357|ref|XP_005855759.1| (paired amphipathic helix repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293300|gb|EKU20600.1| paired amphipathic helix repeat-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 201.445 bits (511), Expect = 6.236e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 Query: 649 MADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVK 752 MADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVK Sbjct: 1 MADAFKFLQRVREKIGAENEEKYNEFLDVLRGYEEKEIVPAEATRRVEALLGGDTELWEEFKGFLPDVGRREEEDEDEDEEDDEGQEEEEEEEGREEVESLLVK 104 HSP 2 Score: 134.42 bits (337), Expect = 1.881e-32 Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0 Query: 1120 GKEGAVEVMGKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 1197 G+E ++ KEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL Sbjct: 94 GREEVESLLVKEEAGPVDGEGRSSNHTGLGQDKASSPVQGNLLKGGGSDEGGKEGGQEGGQEGGKECLSRADASPSGL 171 The following BLAST results are available for this feature:
BLAST of EWM24187.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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