EWM24190.1, cds6481 (CDS) Nannochloropsis gaditana

Overview
NameEWM24190.1
Unique Namecds6481
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:645172..645438 +
Alignment locationCM002468.1:645764..647089 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24190.1
Productgamma-butyrobetaine dioxygenase
Orig transcript idgnl|cribi|Naga_100325g5.3132.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:645172..645438 +
CM002468.1supercontigCM002468.1:645764..647089 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR003819Taurine_dOase
Homology
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|585105576|gb|EWM24190.1| (gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana])

HSP 1 Score: 1104.35 bits (2855), Expect = 0.000e+0
Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 0
Query:    1 MFVTSTFVVLFRIVVYDGASCLCSRRAPASYLSFRHAIHEANRQISMPSDNIHAVAATPRASAPRPSPKKGRTLAAPESRLQSMRTLTQVLLHEQKGIVEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEGSWARVVEGTDGLDEKGRRRETLGLVGMGGKGKGSAPRSSL 530
            MFVTSTFVVLFRIVVYDGASCLCSRRAPASYLSFRHAIHEANRQISMPSDNIHAVAATPRASAPRPSPKKGRTLAAPESRLQSMRTLTQVLLHEQKGIVEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEGSWARVVEGTDGLDEKGRRRETLGLVGMGGKGKGSAPRSSL
Sbjct:    1 MFVTSTFVVLFRIVVYDGASCLCSRRAPASYLSFRHAIHEANRQISMPSDNIHAVAATPRASAPRPSPKKGRTLAAPESRLQSMRTLTQVLLHEQKGIVEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEGSWARVVEGTDGLDEKGRRRETLGLVGMGGKGKGSAPRSSL 530          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|553193336|ref|XP_005855754.1| (gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana CCMP526] >gi|422293295|gb|EKU20595.1| gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1004.97 bits (2597), Expect = 0.000e+0
Identity = 482/484 (99.59%), Postives = 483/484 (99.79%), Query Frame = 0
Query:   47 MPSDNIHAVAATPRASAPRPSPKKGRTLAAPESRLQSMRTLTQVLLHEQKGIVEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEGSWARVVEGTDGLDEKGRRRETLGLVGMGGKGKGSAPRSSL 530
            MPSDNIHAVAATPRASAPRPSPKKGRTLAAPESRLQSMRTLTQVLLHEQKGIVEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEGSWARVVEGTDGL+EKGRRRETLGLVGMGGK KGSAPRSSL
Sbjct:    1 MPSDNIHAVAATPRASAPRPSPKKGRTLAAPESRLQSMRTLTQVLLHEQKGIVEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEGSWARVVEGTDGLEEKGRRRETLGLVGMGGKVKGSAPRSSL 484          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|916614764|ref|WP_051221855.1| (hypothetical protein [Neptunomonas japonica])

HSP 1 Score: 252.292 bits (643), Expect = 3.253e-75
Identity = 145/378 (38.36%), Postives = 196/378 (51.85%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKD-GFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLR 475
            ++V W DG+   +H  WLRDNCP  F   TG+R  + L +  + Y LS       KG          L + W + G    F  +WLR+ CY +           GR       GY      + D + V    +    +S +   +WM  L  YG+A+I  +P +P  VM+ A  I Y R+T++G++F VVS +KP +LAYT + L +HTDL  +E  PG Q LHCL+ D+ GGESTFVDG  V E LR +  E +R LCE  IPF   D         P I LD+ G ++EI +N       +LP+ VM   Y A              +E+K+ AG+MV F+NRR+LHGR AFD  TG RHL G YVD  EF + LR
Sbjct:   30 MQVCWNDGSHATYHYIWLRDNCPTAFHPQTGERCFDLLSVSQDIYPLSITID---KG---------VLIIEWSEQGHISHFEQSWLREFCYSSELAK-------GRS-----SGYQSWDCKFVDRIPVQNQQEI--MSSDRALYEWMSTLDKYGLAIINGMPDSPKAVMQTASRIDYLRQTNFGSTFDVVSEKKPINLAYTSISLPLHTDLANQEVPPGYQFLHCLSNDSVGGESTFVDGLKVLEELREDHPEYFRLLCEYVIPFRFHDEAHDIRQHHPVINLDNFGNIIEIKYNAHLADIFDLPSEVMYDYYIAYRELMGRLKDTRYKIELKLSAGEMVVFDNRRVLHGRNAFDENTGKRHLRGCYVDRSEFKSRLR 381          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|1055657610|ref|WP_067297225.1| (gamma-butyrobetaine dioxygenase [Marinobacterium profundum])

HSP 1 Score: 249.595 bits (636), Expect = 3.729e-74
Identity = 135/380 (35.53%), Postives = 201/380 (52.89%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTW-KDGFSHAFPSAWLRQHCY--ETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLR 475
            + + W DG    FH  WLRDNCP     ST  R +          +   C    +     +    ++L + W  DG S  F   WLR HCY  + R   Q  P +W +  +       LP   Y+D+++  A             ++W+  LRD G++L+++  T PGT+ ++A+ I++ R+T++G  F V S       AYT + L +HTDL  RE  PG+Q LHCL  DA+GGES  VDGF +AE +R E  +D+  L  +P+ F  KD    +  + P + LD  G ++E+ F    RGPL++PA  + R YRA + F  +   P    E ++  GD++ F+NRR+LH R+AFD + G RHL+G YVD DE L+ +R
Sbjct:   32 LRLVWDDGRESEFHYLWLRDNCPCASCVSTLTREQ----------LFEICDVSLSIQPSEARLDDDYLTIQWLGDGHSSRFHPGWLRTHCYSEQARAERQWQPEIWDKAAIEV----CLPKYDYADMMQDDAV-----------LLRWLRKLRDCGISLLQNTDTRPGTLQQVAERISFIRETNFGTLFDVRSKPDANTAAYTTLRLPLHTDLPTRELQPGLQFLHCLENDASGGESILVDGFRIAEHMREEYPDDFAALSRLPMDFYNKDRNSDYRFRGPALVLDGQGTVIEVRFANFLRGPLDVPADQVVRHYRAYSTFIRLTREPRFQFEYRLVPGDLLVFDNRRVLHARRAFDLQQGQRHLQGCYVDRDELLSRIR 386          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|1055792471|ref|WP_067386561.1| (gamma-butyrobetaine dioxygenase [Marinobacterium sp. ST58-10] >gi|1032358313|gb|ANG64877.1| gamma-butyrobetaine hydroxylase [Marinobacterium sp. ST58-10])

HSP 1 Score: 248.825 bits (634), Expect = 7.217e-74
Identity = 135/380 (35.53%), Postives = 204/380 (53.68%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWK-DGFSHAFPSAWLRQHCY--ETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLR 475
            + + W DG    FH  WLRDNCP     S+  R +          +   C    +    ++  + ++L+V W+ DG S  F   WLR HCY  + R   Q  P +W +  +       LP   Y+D+++  A             + W+  LRD G++L+++  T PGT+ ++A+ I++ R+T++G  F V S       AYT + L +HTDL  RE  PG+Q LHCL  DA+GGES  VDGF +AE +R E  +D+  L  +P+ F  KD    +  + P + LD  G ++E+ F    RGPL++PA  + R YRA + F  +   P    E ++  GD++ F+NRR+LH R+AFD + G RHL+G YVD DE L+ +R
Sbjct:   32 LRLVWDDGRESEFHYLWLRDNCPCAQCVSSLTREQ----------LFEICDVPLSIRPETAQLNGDYLEVQWQGDGHSSRFHPGWLRTHCYSEQARAGRQWQPEIWDKATIEA----SLPKYDYADMMQDDAV-----------LLCWLRKLRDCGISLLQNTDTRPGTLQQVAERISFIRETNFGTLFDVRSKPDANTAAYTTLRLPLHTDLPTRELQPGLQFLHCLENDASGGESILVDGFRIAEHMREEYPDDFDALSRLPMDFYNKDRNSDYRFRGPALVLDGQGTVIEVRFANFLRGPLDVPADQVVRHYRAYSTFIRLTREPRFQFEYRLVPGDLLVFDNRRVLHARRAFDLQQGQRHLQGCYVDRDELLSRIR 386          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|516090877|ref|WP_017521457.1| (gamma-butyrobetaine dioxygenase [Pseudomonas nitroreducens])

HSP 1 Score: 246.514 bits (628), Expect = 5.575e-73
Identity = 142/381 (37.27%), Postives = 196/381 (51.44%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQH------HQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVS-ARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLT 472
            +EV W DG    FH  WLRDNCP       G+   +  +      +    +  PA+     G     L V W+DG    F   WLR H Y+          HQ   R+W RD       + +P   +  +++                ++WM+ LRD G++ ++ VPT PG++ ++A  IA+ R+T++G  F V S A   +  AYT   L +HTDL  RE  PG+Q LHCL  DA GG+S FVDGF +A+ LR E+ ED+RTLCE+PI F  KD    +    P I LD  G + EI      RGP + PA  M  +Y A   F  +   P   ++ K++AG M  F+NRR LH R AFDP +G RHL+G Y+D DE L+
Sbjct:   32 LEVLWADGRVSPFHHQWLRDNCPC------GECVYSVTREQVLEIIDVPASLAPARASLDQGQ----LCVDWQDGHRSRFDPGWLRAHAYDDESRAERLAAHQTT-RVWRRD-------FEVPVFQHDRLLE-----------DDSALLEWMLALRDLGLSRVDGVPTAPGSLHRIAQRIAFIRETNFGVLFDVKSKAAAADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAEGGDSVFVDGFAIAQALRDEAPEDFRTLCEMPIEFRNKDRRSDYRCLAPVIALDARGEISEIRIANFLRGPFDAPAEHMDALYHAWRAFLTLTRDPRFRLQQKLRAGQMWCFDNRRTLHARTAFDPASGERHLQGCYIDRDELLS 383          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|1176573226|ref|WP_082400216.1| (hypothetical protein [Neptunomonas antarctica] >gi|1131933429|emb|SIS66701.1| gamma-butyrobetaine dioxygenase [Neptunomonas antarctica])

HSP 1 Score: 246.514 bits (628), Expect = 5.593e-73
Identity = 141/383 (36.81%), Postives = 197/383 (51.44%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKD-GFSHAFPSAWLRQHCY--ETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHG 478
            ++V W DG+   +H  WLRDNCP  F   TG+R  + L +  + + LS            +G     L + W + G    F  +WLR+ CY  E  + H  + + W  + + +     +P     D++           TS +   +WM  L  YG+A+I  +P  P  V++ A+ I Y R+T++G +F VVS + P +LAYT + L +HTDL  +E  PG Q LHCL+ ++ GGESTFVDG  V E LR +  E +R LCE  IPF   D         P I LD+ G +VEI +N       +LP  VM   Y A              +E+K+ AG+MV F+NRR+LHGR AFD   G RHL G YVD  EF + LR  G
Sbjct:   30 IQVRWSDGSNTTYHNIWLRDNCPTAFHPHTGERCFDLLSVSQDIHPLSVTL--------DTGT----LIIEWSEQGHISCFEQSWLREFCYSGELAKDHSSSYQSWSCEFIDH-----IPVDNQQDIL-----------TSDRALYEWMSALDKYGLAIINGMPNEPEAVVQTANRIDYLRQTNFGVTFDVVSEKVPINLAYTSLSLPLHTDLANQEIPPGYQFLHCLSNESMGGESTFVDGLKVLEGLREDQPEYFRLLCEYAIPFRFHDQAHDIREHHPVINLDNFGNIVEIKYNAHLADIFDLPGEVMYDYYIAYRELMGRLKDARYKIELKLSAGEMVVFDNRRVLHGRNAFDDSAGKRHLRGCYVDRSEFKSRLRVLG 384          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|771600805|ref|WP_045213862.1| (gamma-butyrobetaine dioxygenase [Pseudomonas sp. 21] >gi|770081181|gb|KJJ98692.1| gamma-butyrobetaine dioxygenase [Pseudomonas sp. 21])

HSP 1 Score: 244.588 bits (623), Expect = 3.331e-72
Identity = 142/381 (37.27%), Postives = 196/381 (51.44%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYETRQH------HQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVS-ARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLT 472
            +EV W DG    FH  WLRDNCP      +  R +  L++      L+   AG  +GQ         L + W+DG    F   WLR H Y+          HQ   R+W RD       + +P   +  ++                 ++WM+ LRD G++ ++ VPT PG++ ++A  IA+ R+T++G  F V S A   +  AYT   L +HTDL  RE  PG+Q LHCL  +A GG+S FVDGF +A  LR E+ ED+R LCE+PI F  KD    +    P I LD  G + EI      RGP + PA  M  +Y A   F  +   P   ++ K++AG M  F+NRR LH R AFDP +G RHL+G Y+D DE L+
Sbjct:   32 LEVLWADGRVSPFHHQWLRDNCPCSECVYSVTR-EQVLEIIDVPANLAPSRAGLDQGQ---------LCIDWQDGHRSRFDPGWLRAHAYDDESRAERLAAHQTT-RVWRRD-------FEVPVFQHDQLMD-----------DDSALLEWMLALRDLGLSRVDGVPTAPGSLQRIAQRIAFIRETNFGVLFDVKSKAEAADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNNADGGDSVFVDGFAIARALRDEAPEDFRALCEMPIEFRNKDRRSDYRCLAPVIALDARGEISEIRIANFLRGPFDAPAERMDALYHAWRAFLTLTRDPRFRLQQKLRAGQMWCFDNRRTLHARTAFDPASGERHLQGCYIDRDELLS 383          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|1180891746|ref|WP_084336089.1| (gamma-butyrobetaine dioxygenase [Pseudomonas indica] >gi|1087080927|emb|SDL68386.1| gamma-butyrobetaine dioxygenase [Pseudomonas indica])

HSP 1 Score: 243.432 bits (620), Expect = 9.284e-72
Identity = 149/384 (38.80%), Postives = 195/384 (50.78%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCPVYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSG--ASAEFLQVTWKDGFSHAFPSAWLRQHCYE-----TRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLR 475
            +EV W D     FH  WLRDNCP      T  R +          VL      PA  QP      +   L+V W DG    +   WLR H Y+      R   +   R+W   L  +     LP   Y+ V+K             +  + W+  LRD G+  ++ +PT PGT+  +A  IA+ R++++G  F V S    +  AYT   L +HTDL  RE  PG+Q LHCL  DA GG+S FVDGF +AE LRRE+ ED+RTLCE+P+ F  KD    +    P I LD  G + EI      RGP   PA  M  +YRA  HF A+   P   VE +++AG M  F+NRR LH R AFDP +G RH +G YVD DE L+ +R
Sbjct:   35 LEVEWSDTRISPFHYLWLRDNCPCAQCVYTVTREQ----------VLEIVDV-PADLQPRQARIEADGALRVDWPDGHVSRYHPGWLRAHAYDDLSREERLRERPRSRLWATGLNEH-----LPVFDYAAVMK-----------DDRTLLDWLRALRDTGLTQVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPEDFRTLCELPVEFRNKDRHSDYRCLAPIIALDAHGAVTEIRIANFLRGPFNAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGARHFQGCYVDRDELLSRIR 391          
BLAST of EWM24190.1 vs. NCBI_GenBank
Match: gi|802131951|ref|WP_046039353.1| (gamma-butyrobetaine dioxygenase [Pseudomonas fluorescens] >gi|799203280|gb|KJZ48117.1| gamma-butyrobetaine dioxygenase [Pseudomonas fluorescens])

HSP 1 Score: 243.047 bits (619), Expect = 1.214e-71
Identity = 137/383 (35.77%), Postives = 193/383 (50.39%), Query Frame = 0
Query:   99 VEVSWQDGTRGLFHGAWLRDNCP----VYFDNSTGQRTKNTLQLGPEAYVLSACAAGPAKGQPSSGASAEFLQVTWKDGFSHAFPSAWLRQHCYET-----RQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLT 472
            V V W D     FH  WLRDNCP    VY    T ++    + +  +    +A   G              L V W+DG S  F   WLR H Y+      RQ H+   R+W  DL        LP   Y  ++             +Q  +QW++ +RD G+  +  VPT PG++  +A  I++ R++++G  F V S    +  AYT   L +H+DL  RE  PG+Q LHCL  DA GGES FVDGF +A+ LRRE+ E +++LCE+P+ F  KD    +    P I LD  G++ EI      RGP +     M ++Y+A   F A+   P   +  ++  G++  F+NRR LH R AFDP TG RH +G YVD DE L+
Sbjct:   29 VLVKWADDRVSPFHHQWLRDNCPCPQCVY--TVTREQVLEIVDVAQDLMPDNASIDGDG-----------CLSVDWQDGHSSRFDPGWLRAHAYDDESRAERQQHKPKARLWHSDLQ-------LPVFEYQALM-----------NDSQALLQWLLAVRDVGLTQVRGVPTEPGSLKLIAQRISFIRESNFGVLFNVQSKADADSNAYTAFNLPLHSDLPTRELQPGLQFLHCLVNDAEGGESIFVDGFAIADALRREAPESFKSLCEIPVEFRNKDRHSDYRCLAPIIALDALGQVSEIRMANFLRGPFDASVEQMPKLYQAYRRFIAMTREPRFRLMQRLNPGELWCFDNRRTLHARNAFDPATGARHFQGCYVDRDELLS 380          
The following BLAST results are available for this feature:
BLAST of EWM24190.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105576|gb|EWM24190.1|0.000e+0100.00gamma-butyrobetaine dioxygenase [Nannochloropsis g... [more]
gi|553193336|ref|XP_005855754.1|0.000e+099.59gamma-butyrobetaine dioxygenase [Nannochloropsis g... [more]
gi|916614764|ref|WP_051221855.1|3.253e-7538.36hypothetical protein [Neptunomonas japonica][more]
gi|1055657610|ref|WP_067297225.1|3.729e-7435.53gamma-butyrobetaine dioxygenase [Marinobacterium p... [more]
gi|1055792471|ref|WP_067386561.1|7.217e-7435.53gamma-butyrobetaine dioxygenase [Marinobacterium s... [more]
gi|516090877|ref|WP_017521457.1|5.575e-7337.27gamma-butyrobetaine dioxygenase [Pseudomonas nitro... [more]
gi|1176573226|ref|WP_082400216.1|5.593e-7336.81hypothetical protein [Neptunomonas antarctica] >gi... [more]
gi|771600805|ref|WP_045213862.1|3.331e-7237.27gamma-butyrobetaine dioxygenase [Pseudomonas sp. 2... [more]
gi|1180891746|ref|WP_084336089.1|9.284e-7238.80gamma-butyrobetaine dioxygenase [Pseudomonas indic... [more]
gi|802131951|ref|WP_046039353.1|1.214e-7135.77gamma-butyrobetaine dioxygenase [Pseudomonas fluor... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6497rna6497Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications