EWM30029.1, cds647 (CDS) Nannochloropsis gaditana

Overview
NameEWM30029.1
Unique Namecds647
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:81001..81375 -
Alignment locationCM002456.1:80589..80902 -
Alignment locationCM002456.1:79728..80454 -
Alignment locationCM002456.1:79146..79511 -
Alignment locationCM002456.1:78875..79081 -

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Properties
Property NameValue
Protein idEWM30029.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100346g3.7657.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:81001..81375 -
CM002456.1supercontigCM002456.1:80589..80902 -
CM002456.1supercontigCM002456.1:79728..80454 -
CM002456.1supercontigCM002456.1:79146..79511 -
CM002456.1supercontigCM002456.1:78875..79081 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30029.1 vs. NCBI_GenBank
Match: gi|585112655|gb|EWM30029.1| (hypothetical protein Naga_100346g3 [Nannochloropsis gaditana])

HSP 1 Score: 1338.55 bits (3463), Expect = 0.000e+0
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 0 
Query:    1 MVSVESGSSYGMQVWVLIPVAGLGVESRATRTVHCGMGGRASPASDTPRPSSHAPLSFLISDSPTVRHVDGSHLLGFARVAGDEELEVLAQDYLHRMAGHHASSLLITYVPLAWLQARSLRTGAKGIVLAFRHRPSPIHESSSNLVLSAHDHLLSCLPSSLPPSHRPFLRHNACYRLDQEFHPLWSSSSHSSSCTHPPLPSSLADKEGNVWLYAMTPQKDAPVLLKALLRELSSASRALLKPPSKAGSGREGGRERSDSVFSLLSTTSSVASFASYSSSDVSEEGQGGKEEGREEGREEGKEEVGGDGSGEQDERGVKETRSAEATEVGDGGKVKPKTSYAVRFEEHWTSSLSASPPTASRDDHSGPKHRQDNVRGGFTVLSLVPTPGKVGGREGAAGEEAEEEVVAELEKYLSQTTAPSSLDTFPALCSSSSARSQSHQRVLKASLCVVNPPTPLLAHALSAFEKVVVEWESNAILFPHLSLPALEVLLVRFLLLPSSSSPLPPAFEIRRINNLGRGGVIEGQRHRPLRLSPTANHSKKGEEWTGLDRKFCNTQTEQNVMEELTQCGSATDGRGNNYLHHHLRHVSSRDIKRLCAPVRTILCEREREESNLLPLCPWEAKGEKGGLHGCIVQTCRSDHCHNGSLGSRETSQCNIGLQLIRQ 662
            MVSVESGSSYGMQVWVLIPVAGLGVESRATRTVHCGMGGRASPASDTPRPSSHAPLSFLISDSPTVRHVDGSHLLGFARVAGDEELEVLAQDYLHRMAGHHASSLLITYVPLAWLQARSLRTGAKGIVLAFRHRPSPIHESSSNLVLSAHDHLLSCLPSSLPPSHRPFLRHNACYRLDQEFHPLWSSSSHSSSCTHPPLPSSLADKEGNVWLYAMTPQKDAPVLLKALLRELSSASRALLKPPSKAGSGREGGRERSDSVFSLLSTTSSVASFASYSSSDVSEEGQGGKEEGREEGREEGKEEVGGDGSGEQDERGVKETRSAEATEVGDGGKVKPKTSYAVRFEEHWTSSLSASPPTASRDDHSGPKHRQDNVRGGFTVLSLVPTPGKVGGREGAAGEEAEEEVVAELEKYLSQTTAPSSLDTFPALCSSSSARSQSHQRVLKASLCVVNPPTPLLAHALSAFEKVVVEWESNAILFPHLSLPALEVLLVRFLLLPSSSSPLPPAFEIRRINNLGRGGVIEGQRHRPLRLSPTANHSKKGEEWTGLDRKFCNTQTEQNVMEELTQCGSATDGRGNNYLHHHLRHVSSRDIKRLCAPVRTILCEREREESNLLPLCPWEAKGEKGGLHGCIVQTCRSDHCHNGSLGSRETSQCNIGLQLIRQ
Sbjct:    1 MVSVESGSSYGMQVWVLIPVAGLGVESRATRTVHCGMGGRASPASDTPRPSSHAPLSFLISDSPTVRHVDGSHLLGFARVAGDEELEVLAQDYLHRMAGHHASSLLITYVPLAWLQARSLRTGAKGIVLAFRHRPSPIHESSSNLVLSAHDHLLSCLPSSLPPSHRPFLRHNACYRLDQEFHPLWSSSSHSSSCTHPPLPSSLADKEGNVWLYAMTPQKDAPVLLKALLRELSSASRALLKPPSKAGSGREGGRERSDSVFSLLSTTSSVASFASYSSSDVSEEGQGGKEEGREEGREEGKEEVGGDGSGEQDERGVKETRSAEATEVGDGGKVKPKTSYAVRFEEHWTSSLSASPPTASRDDHSGPKHRQDNVRGGFTVLSLVPTPGKVGGREGAAGEEAEEEVVAELEKYLSQTTAPSSLDTFPALCSSSSARSQSHQRVLKASLCVVNPPTPLLAHALSAFEKVVVEWESNAILFPHLSLPALEVLLVRFLLLPSSSSPLPPAFEIRRINNLGRGGVIEGQRHRPLRLSPTANHSKKGEEWTGLDRKFCNTQTEQNVMEELTQCGSATDGRGNNYLHHHLRHVSSRDIKRLCAPVRTILCEREREESNLLPLCPWEAKGEKGGLHGCIVQTCRSDHCHNGSLGSRETSQCNIGLQLIRQ 662
[Close]
BLAST of EWM30029.1 vs. NCBI_GenBank
Match: gi|553183364|ref|XP_005853885.1| (hypothetical protein NGA_0429600 [Nannochloropsis gaditana CCMP526] >gi|422295174|gb|EKU22473.1| hypothetical protein NGA_0429600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 915.99 bits (2366), Expect = 0.000e+0
Identity = 457/470 (97.23%), Postives = 461/470 (98.09%), Query Frame = 0 
Query:  126 GIVLAFRHRPSPIHESSSNLVLSAHDHLLSCLPSSLPPSHRPFLRHNACYRLDQEFHPLWSSSSHSSSCTHPPLPSSLADKEGNVWLYAMTPQKDAPVLLKALLRELSSASRALLKPPSKAGSGREGGRERSDSVFSLLSTTSSVASFASYSSSDVSEEGQGGKEEGREEGREEGKEEVGGDGSGEQDERGVKETRSAEATEVGDGGKVKPKTSYAVRFEEHWTSSLSASPPTASRDDHSGPKHRQDNVRGGFTVLSLVPTPGKVGGREGAAGEEAEEEVVAELEKYLSQTTAPSSLDTFPALCSSSSARSQSHQRVLKASLCVVNPPTPLLAHALSAFEKVVVEWESNAILFPHLSLPALEVLLVRFLLLPSSSSPLPPAFEIRRINNLGRGGVIEGQRHRPLRLSPTANHSKKGEEWTGLDRKFCNTQTEQNVMEELTQCGSATDGRGNNYLHHHLRHVSSRDIKRLC 595
            GIVLAFRHRPSPIHESSSNLVLSAHDHLLSCLPSSLPPSHRPFLRHNACYRLDQEFHPLWSSSSHSSSCT PPLPSSLADKEGNVWLYAMT QKDAPVLLKALLREL SASRALLKPPSKAGSGREGGRERSDSVFSLLSTTSSVASFASYSSSDVSEEGQGGKEEGREEG+EEGKEEVGGDGSGEQDERG KET+ AEATEVGDGGKVKPKTSYAVRFEEHWTSSLSASPPTASRDDHSGPKHRQDNVRGGFTVLSLVPTPGKVGGREGAAG EAEEEVVAELEKYLSQTTAPSSLDTFPALCSSSSARSQSHQRVLKASLCVVNPPTPLLAHALSAFEKVVVEWESNA+LFPHLSLPALEVLLVRFLLLPSSSSPLPPAFEIRRINNLGRGGVIEGQRH+PLRLSPTANHSKK EEWTGLDRKFCNTQTEQNVMEELTQCGSA DGRGNNYLHHHLRHVSSRDIKRL 
Sbjct:    4 GIVLAFRHRPSPIHESSSNLVLSAHDHLLSCLPSSLPPSHRPFLRHNACYRLDQEFHPLWSSSSHSSSCTRPPLPSSLADKEGNVWLYAMTSQKDAPVLLKALLRELGSASRALLKPPSKAGSGREGGRERSDSVFSLLSTTSSVASFASYSSSDVSEEGQGGKEEGREEGKEEGKEEVGGDGSGEQDERGGKETQRAEATEVGDGGKVKPKTSYAVRFEEHWTSSLSASPPTASRDDHSGPKHRQDNVRGGFTVLSLVPTPGKVGGREGAAGREAEEEVVAELEKYLSQTTAPSSLDTFPALCSSSSARSQSHQRVLKASLCVVNPPTPLLAHALSAFEKVVVEWESNAVLFPHLSLPALEVLLVRFLLLPSSSSPLPPAFEIRRINNLGRGGVIEGQRHQPLRLSPTANHSKKEEEWTGLDRKFCNTQTEQNVMEELTQCGSAPDGRGNNYLHHHLRHVSSRDIKRLV 473
The following BLAST results are available for this feature:
BLAST of EWM30029.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112655|gb|EWM30029.1|0.000e+0100.00hypothetical protein Naga_100346g3 [Nannochloropsi... [more]
gi|553183364|ref|XP_005853885.1|0.000e+097.23hypothetical protein NGA_0429600 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna647rna647Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications