EWM24208.1, cds6469 (CDS) Nannochloropsis gaditana

Overview
NameEWM24208.1
Unique Namecds6469
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:617217..617258 -
Alignment locationCM002468.1:616695..616865 -
Alignment locationCM002468.1:614993..616501 -
Alignment locationCM002468.1:614431..614865 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24208.1
ProductKinetochore protein Ndc80
Orig transcript idgnl|cribi|Naga_100217g2.6977.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:617217..617258 -
CM002468.1supercontigCM002468.1:616695..616865 -
CM002468.1supercontigCM002468.1:614993..616501 -
CM002468.1supercontigCM002468.1:614431..614865 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005623cell
Vocabulary: INTERPRO
TermDefinition
IPR005550Kinetochore_Ndc80
Homology
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|585105597|gb|EWM24208.1| (Kinetochore protein Ndc80 [Nannochloropsis gaditana])

HSP 1 Score: 1488.4 bits (3852), Expect = 0.000e+0
Identity = 718/718 (100.00%), Postives = 718/718 (100.00%), Query Frame = 0
Query:    1 MRDAFGAPNETCQVRNFNRFYTVIMALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAYGSHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAGDRKLGKRLVPCPGTRLTRTLYTTISPYTYPRLLLLPFSLPLRLSHLHTQRNSANSACRNGTNC 718
            MRDAFGAPNETCQVRNFNRFYTVIMALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAYGSHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAGDRKLGKRLVPCPGTRLTRTLYTTISPYTYPRLLLLPFSLPLRLSHLHTQRNSANSACRNGTNC
Sbjct:    1 MRDAFGAPNETCQVRNFNRFYTVIMALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAYGSHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAGDRKLGKRLVPCPGTRLTRTLYTTISPYTYPRLLLLPFSLPLRLSHLHTQRNSANSACRNGTNC 718          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|971506611|dbj|GAQ91593.1| (Centromere-associated protein HEC1 [Klebsormidium nitens])

HSP 1 Score: 325.094 bits (832), Expect = 2.863e-98
Identity = 225/631 (35.66%), Postives = 348/631 (55.15%), Query Frame = 0
Query:   29 RRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAYGS--HVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGD--DDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAG 655
            +RR TL  L +S  N RQS G P+R VS+T+   N         R ++ P S S+      AS+  R S G PR S    R+S+ +GS    + DPRP  DKG+ +A IR LI YLT+H Y+   S K+L  PT+K+F +IV FLF +VD N +   K+EDEV   FK +RYPF ISK+++QAVG+ HTWP LLA++ W+V+LL Y+E          A+A         D F+ + ++   EY+ ++Y+ FL+G+  D   + L++ L   FE R  E     + LE     +R E+ A  T+ A L  L+++  + +SD+GKFR LIE L AH + L  KV+++  +L++    L  V  +  +L A VAAQ ++ EDVARM +E+ +++E L      K ++ K +W+AE+++SR + +LE A ++++     L ++P  A+ + G+Q+E+ +   A    A PE+++  D+KGVI+P+LA IK+    K   A+  VL + + +  +EE V+E    +   E  ++K E   +AEK R E  +   ++ V A EE +  L S    DL     R HQ L    AEL   R       +A++  ++ AL  L  HK  ++  L    G
Sbjct:    4 QRRTTLGTLEASQMNSRQSTG-PAR-VSQTAAAKN--------KRLTVGPGSFSTRAPLQDASNQARLSAGQPRGSMVP-RRSSIFGSRPQAKNDPRPLADKGFQKACIRSLITYLTNHGYNHAISEKLLSTPTSKEFLHIVQFLFHKVDTNIKFGPKIEDEVPLVFKRLRYPFQISKSALQAVGSPHTWPALLAALAWLVDLLNYEER---------AIAAK-----ERDAFDESGQRLFLEYVEQSYRLFLEGEARDADASLLDEQLAQQFEVRDAETGVDIERLEAANTALRAELDAARTQPAPLEELERKRENLISDVGKFRKLIENLQAHGDMLRKKVDEKTADLAAKRTELAAVAAENQDLTARVAAQSINAEDVARMSKEKLKVEEVLRTVTAQKDRLEKDVWQAEVQLSRHLEELEGAVRSYHAAGDRLKVLPSDAKRAGGLQFELTLHARA----ARPEDMLSGDLKGVIKPALAAIKDAYTSKTRAAQAEVLGLAEAQDGSEEAVSEKQDAVAQREAALRKVEAACRAEKERGEGEVRGMAAEVAATEELLQQLGSSTGADLHHADQR-HQALV---AELAEVRAGAAAEREAVTGQVLAALDLLMSHKAYIQETLARVHG 601          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|159483571|ref|XP_001699834.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158281776|gb|EDP07530.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 279.256 bits (713), Expect = 2.076e-81
Identity = 175/560 (31.25%), Postives = 287/560 (51.25%), Query Frame = 0
Query:  101 PRKSSTGL--RKSTAYG---SHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAG 655
            P     GL  R+S+A+G   S  +QDPRP + K Y  + IR +I YL+ HN+    + K L  PT KDF  IV+FLF+QVD  FRI GK+EDEV  FFK + YPF ISK+++ AVG+ H+WP +LA++TW+VELL Y E+  ++A             GS  + E   E+   +YL   Y AF+ G+DD   QL+D L   F  R G++ A+C+ L+    ++  E+    +    +   QQ+  + L D+ KF  LI+ L   ++ L  K+ +++ +L +    +      V +L+  VA+Q ++  D+ RM  ER + +E L+  +E   +M   + E E+++   +  LE+  + +N  A  L LIP T++ ++G  YE+ +++     SA   E   LD+KGV++P L ++  +   +  E    ++ + +      E   E   E   LEG++ + E   +A K   E       +  D+++ QV   RS        RT    +RL++++A     + + E     +   +  A+  L  HKE V   +   AG
Sbjct:    6 PSAVGAGLDPRRSSAFGTKPSGPKQDPRPLSSKDYQASCIRAVITYLSTHNFPAAVAPKTLASPTGKDFATIVTFLFQQVDPTFRIQGKVEDEVPVFFKRLNYPFQISKSALFAVGSPHSWPAVLAALTWLVELLNYMEKADDNA-------------GSAFERENKVEQEFLDYLSAGYGAFMSGNDDRCQQLDDELAAKFTAREGDLVARCEQLKRANAEVLAELERLRSLPDPVVVAQQQREEQLVDMQKFEQLIQNLQGLKQTLTRKLSEKKSDLQAKQDQIAGAVADVEQLRQRVASQTINKADLNRMIMERNKQNEMLNSEKEKCEQMECKVHEQEVQIVHRLTALESTVERYNKLAHRLKLIPATSKRADGTNYELRINRD----SANQAEFSSLDLKGVVKPGLERLCEMYRTRASELSQDLISLREACVARAERNVEKKEENAALEGEIARLEAQLQAAKDAHEEKCRRLVAQADSIKAQVDEFRSAA----SNRTEHMEERLSRVQAAYEQTKRDSEAELSRLESDLKAAMQMLIAHKEAVGGAISRAAG 544          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|325180865|emb|CCA15275.1| (predicted protein putative [Albugo laibachii Nc14])

HSP 1 Score: 280.411 bits (716), Expect = 4.679e-81
Identity = 210/671 (31.30%), Postives = 341/671 (50.82%), Query Frame = 0
Query:   30 RRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDK--VSKP-QGRASLHPSSSSSSF-----------SSTTASSSLRNSN---------------GPPRKSST---GLRKSTAYGSH-VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSK--GAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAE----AVAELETLEG---KVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAGDRK 658
            RR TL P+SSS  N R S+  P+   SR S    +D+  + KP Q R S+ PS+++ S             S    SS+   N                  R+SST   G R S+    + VRQDPRP TDKG++ ASI  L+ +L+   YD   S+K+L+ PT K+   I+ FLFRQ+D N+   GKLE+E+  FFK +RYPF ++K SM  V   H+WP LLASITW++ELL YDE V+N  AN+       +G           +KA  EYL +AY+AFL G+D+ Y  LE  L    +++   ++ +   L +  E++   +    T  ++LP L  R +DY SDL KF+ LI QL   +E +  K +    EL++    L  ++  +  L+  +  Q++S +DV RM QER RL E + +  + +  +    W  E ++   +  LE   + +   A  L L+P  A+N++G+ YE+ +    G V A+      +   ++  IRP+L+ ++   +D+++ A       LDE ++ E+E  +    A  EL+ ++G   K++K ++  + EK   +A   + ++  + VE ++  + ++   DL     ++ Q L + +       E +E   +        AL A   HKEE++R +  +A + K
Sbjct:    2 RRTTLGPISSSQLNARSSLA-PT-ASSRAS----YDEYHIYKPAQMRQSVGPSTANPSRRVSNSVGTSIPGSRVGRSSVSTKNIRSSVSSASRLSSGAAGGRRSSTFSAGNRASSISTRNGVRQDPRPVTDKGFVNASIHQLLEFLSAKQYDAILSSKLLKGPTKKEACNILQFLFRQIDFNYAFEGKLEEEIALFFKILRYPFPMTKTSMVTVAP-HSWPPLLASITWIIELLNYDETVEN--ANRIEEMDEENG-----------DKAFLEYLNQAYRAFLSGEDEKYRMLEQQLANQIDSKNQIIRDEYAQLISTKEELLQSIEQAKTAKSSLPSLNVRKADYTSDLEKFKKLIAQLENLKESVLRKNDDGAVELNAKKNELVTLQNAIQSLRVKIGNQKISADDVQRMVQERHRLQELVQQTEQRQRDLQSENWRLETDLVEEMDQLEAQVKRYGQLAMQLKLLPSMAKNAHGVNYELELDMHVGKVDAAV----YLSNHLRKHIRPALSNLRKNRIDRLNVA-------LDEASQLEQETQKSGEVASIELQGVQGVEMKIRKVDDTLRREKETCDAISKQHTATTEDVELRIASILNE--ADLTAEELQSRQLLEEAQNRSIAMCESYENLVEKYRHGFTNALMASNSHKEEIERGVQTYATEIK 639          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|635363853|emb|CCI47640.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 277.33 bits (708), Expect = 7.896e-80
Identity = 201/668 (30.09%), Postives = 337/668 (50.45%), Query Frame = 0
Query:   30 RRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSS--FSSTTASSSLRNSNGPPRKSS-----------------TGLRKSTAYGSH-----------VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSK--GAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAE----AVAELETLEG---KVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAGDRK 658
            RR TL P+SSS  N R S+ +P+   SR S    +      Q R S+ PS+++ S   S+TT++S   N  G    S+                  G R+S+ + +            VRQDPRP TDKG++ ASI  L+ +L+   YD   S+K+L+ PT K+   I+ FLFRQ+D N+   GKLE+E+  FFK +RYPF ++K SM  V   H+WP LLASITW++ELL YDE V++  AN+     + +G           ++A  EYL +AY+AFL G+D+ Y  LE  L    +++   ++ +   L    +++   +    T  ++LP L  R +DY SDL KF+ L+ QL  ++     K    E EL+S    L  ++  +  L+  +  Q++S +DV RM QER RL E + +  + +  +    W  E ++   +  LE   + +   A  L L+P  A+N++GI YE+ +    G V A+      +   ++  IRP+L+  +   +++++ A       LDE ++ E+E  +    A  EL+ ++G   K++K ++  + EK   EA   + ++  + VE ++  + ++   DL     ++ Q L + +       E ++   +        AL A   HKE+++R +  +  + K
Sbjct:    2 RRTTLGPISSSQLNARSSV-VPT-ASSRASYD-EYHIYKSSQARQSVGPSTANPSRRVSTTTSTSIPGNRAGRSSVSTKNIRSSVSSSSRLSSGAAGGRRSSTFSAGNRASSISTRNGVRQDPRPVTDKGFVNASIHRLLEFLSAKQYDAILSSKLLKGPTKKEACNILQFLFRQIDLNYAFEGKLEEEIALFFKILRYPFPMTKTSMVTVAP-HSWPPLLASITWIIELLNYDETVED--ANRIEEMEAENG-----------DRAFLEYLNQAYRAFLSGEDEKYRMLEQELANQIDSKNQIIRDEYAQLTNAKDELLHSIEQAKTAKSSLPSLNVRKADYTSDLEKFKKLVAQLDNYKSSAIRKNHDGEVELNSKKNELAALQNAIQSLRVKIGNQKISADDVQRMVQERLRLQELVQQTEQRQRDLQSENWRLETDLVEEMDQLEAQVKRYGQLAMQLKLLPSMAKNAHGINYELELDMHVGKVDAAV----YLSNHLRKHIRPALSNFRKNRIERLNVA-------LDEASQLEQEAQKSGEVASVELQGVQGMEMKIRKVDDTLRREKETCEAISKQHTATTEDVELRIASILNE--ADLSAEELQSRQLLEEAQNRSSAMCESYDNLVERSRHGFTNALIASNSHKEDIERGIQTYTTEIK 639          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|545358450|ref|XP_005644796.1| (hypothetical protein COCSUDRAFT_25458 [Coccomyxa subellipsoidea C-169] >gi|384246763|gb|EIE20252.1| hypothetical protein COCSUDRAFT_25458 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 271.937 bits (694), Expect = 2.835e-78
Identity = 206/641 (32.14%), Postives = 316/641 (49.30%), Query Frame = 0
Query:   25 MALSRRRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAYGSHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKM---LDEEAKTEEEVAEAVAELET------LEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLE--REEHEQASKAISESIMG----ALHALADHKEEVKRRL 650
            M+ + RR TL  LS +  N RQSMG P+R       G    K     GR S+ P +   +  +T            PR+SS     + A     + DPR   DK Y    IR LI YL+ H YDQP + K+L  P  KD   I+ FL RQVD + +  GK+EDEV A FK ++YP+ ISK+++ AVG+ HTWP LLA++ W+ ELL Y+E+ +                 + DD  R+ E   F Y+  AY+ FL G+D+  A ++D+    F  R    + +   L+ + E +  E+ A  +  + L   + +H ++LSD  KFR L++ L +H+EGL  KV +R  +L S  + L      + +++A +AAQ +S +DV RM  ER + ++ L      +  +   + + E      + DL+ A Q +++ A  L LIP +A+ + GIQYE+ + +   +A     ELI +D+KGV++  L +++     +  E     L +   LD    +  E AE  A L T      L   V + E    A K  ME  +  +++  DA+         K +VD E R    H       A L L+   EE  +A++A +E + G    AL AL DHK  ++R L
Sbjct:    1 MSNNNRRQTLGGLSPAMLNSRQSMG-PARIAME---GKTAGKGPGLSGRPSMFPGNVRLAGPATAV----------PRRSS-----AHAKAGGPKHDPRRIGDKAYQANCIRTLIAYLSTHGYDQPLTPKMLANPMGKDVINIMHFLMRQVDPHCKNQGKIEDEVPALFKRLKYPYTISKSALFAVGSPHTWPGLLAALVWLTELLYYEEKAEQVREQ------------TFDDKARS-ESNFFNYVSTAYRHFLSGNDEECAAVDDAQTRVFHDRAEATRTRNAELQQENERLAAEVEAMRSSPSPLEEARAKHQEHLSDRDKFRKLLDNLQSHKEGLQRKVAERTADLRSKQQQL----AAIEQMRARIAAQTVSRDDVIRMNHERVKQEQRLGAVASQREALDARVADQERACEHRLDDLDAALQMYHSAADRLQLIPASAKRAAGIQYEISLDRSGTTA----HELINIDLKGVVKAGLVRVREGSGSRARELAEEALALQEGLDGAQHSASERAEENAALATQARTPCLSMTVAQLERQLAASKEAMEGDIRARAAEADAL---------KGVVD-ELRNATCHTIAGSEAAILALQGHAEEAVRANEAEAEQLNGDLAEALQALLDHKLHLQRTL 591          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|545701193|ref|XP_005702932.1| (kinetochore protein NDC8 [Galdieria sulphuraria] >gi|452819351|gb|EME26412.1| kinetochore protein NDC8 [Galdieria sulphuraria])

HSP 1 Score: 271.552 bits (693), Expect = 3.120e-78
Identity = 180/632 (28.48%), Postives = 331/632 (52.37%), Query Frame = 0
Query:   30 RRGTLEPLSSSGFNQRQSMGMPSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASS-SLRNSNGPPRKSSTGLRKSTAYGSHV--RQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRS---KVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAG 655
            RR TL  +S+ G  Q+           R SLGP          RA+L  S+S     +++A    L  S+   R SS G+R+S+ + + V  + DPRP  DK Y+   +R LI +L+ H YDQ  S K L  PT+K+F  I+ FL R++D  F    K E+E+   FK ++YPF ISK+++ AVG+ HTWPTLL  + W+ +LL YDE+             S     S+D  E +  +  F+Y+ ++Y+AFL G D  + + ++ L  +F+     ++++ + LE +I+  + E      +  +L  L+Q+  DY  D+ KF++LI QL  HR+    K+  R+EEL +  ++LE  + +   L+ ++  QEL+  D  R+Q+++  L EAL+KA  H+ +  +   + + ++      +E A + ++  A  L LIP TA+N+ G  +E+ +S+ A  +    E+++ LD+  V++P++ +++     K    R   L + ++    EE++     E  +LEGK +K E  YK E+  + + +  K+     +E++V  +++     L + +      +    Q + +L  E+E+       ++++++ ++  L  +K E++ ++  ++ 
Sbjct:    2 RRTTLSSVSTGGNIQQ-----------RLSLGP---------SRANL--SNSKEDLKTSSAQRPRLSASSTSTRYSSLGVRRSSVFTNKVGLKVDPRPLNDKSYLNDCVRNLIYFLSTHGYDQAISPKTLTTPTSKEFQSILLFLLRKIDPYFDFEKKFEEELPTLFKTLKYPFTISKSTLYAVGSPHTWPTLLGLLVWITDLLAYDEQ------------ASSQETKSIDT-ESSLNRIFFDYVSRSYQAFLGGADS-FDEFDEELAATFDKENNRVESETEELEREIKRFQDEYHQLIEKRNSLESLRQKIEDYKKDIEKFKTLINQLEQHRQVYDKKIADRDEELQNEEKNLEVWKQEKNRLRQIIEDQELNHIDGHRLQRDKQMLTEALEKAYAHRQEAIELQSKVDEKLIEQTAKVEDALRDYHRLAEKLQLIPSTAKNAKGFNFEIELSRDA--SLHRCEDILSLDLSSVVKPTIHELREAFSSKASRTREEELTVQEKYNHLEEQLLFKRNETSSLEGKYQKLENHYKNERETLASYLESKARETSELEQEVAQMKASNDSALRESQQALDSAYSEYKQTQKQLYEEKEQ-------MNDALLQSIELLTMYKMEIRDKVNSYSN 588          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|1072230877|gb|OEU15610.1| (hypothetical protein FRACYDRAFT_157212, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 261.922 bits (668), Expect = 8.787e-76
Identity = 169/509 (33.20%), Postives = 272/509 (53.44%), Query Frame = 0
Query:  121 DPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRI-TGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSG-CGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKA 627
            DPRP TDK Y Q  I+ L ++L    Y+ P S K L RP+ KDF+ IV+F+ R+VD +F+  T K+EDE+   FKAM YPF++SK ++ A G+ HTWPTLLA++TW+++ +   E +         +  + SG   SV++ E   +   F YL  +Y AFL GD+ L  +LE  L    E     +    + +  K   +  +M         L  L Q+   Y +DL +F  LI Q+  H   L  K   + EEL    +SL  +  +V +LK  +  QELS +DV +MQ ER  ++EA+++A   + +    LWE E EV ++  DLE+    +++    L L+PI +  S GI+ E VV+K AV       +L+ +D+ G+I+P+L          + +++    + LD+  ++EEE  EA+     +E K+ K EE  +AE+   +A +  +    D++E +V  LR  V   LE +  +  ++ ++LEA     R++HE+ + A
Sbjct:    1 DPRPVTDKLYQQDCIKDLFSFLQKSGYEHPISHKSLSRPSGKDFSNIVTFMLRRVDPSFQDGTLKIEDEIAMNFKAMGYPFSVSKTALVAAGSPHTWPTLLAALTWLMKRIQCMEYLI------PVVEENNSGEFDSVEELESKTDTYFFSYLSASYTAFLKGDEKLREELEMGLADRLEGDDNILMQDIEQMTDKNAAIVEKMNNLGMGEKDLEELVQKRDSYATDLEQFHDLIHQMDQHVATLKNKKNNQSEELEETSKSLAKIVSKVQQLKGSIGNQELSLDDVQKMQNERKGVEEAIERALALRDQRRSALWEIESEVDKSWSDLESFVSDYSSNVGDLKLVPIVS--SKGIEMEAVVNKDAV-LDPNLSKLLDIDLPGIIQPTLTSCHEEYCSLISDSKWKYQEALDKLERSEEEFTEALERNRIVENKIDKCEETMEAERDAQDAKLGVRVREADSIETKVASLRDPVA--LEEQMTQFERQCSELEA----MRQQHEEDNVA 494          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|299472165|emb|CBN77150.1| (Putative: similar to kinetochore associated 2 [Ectocarpus siliculosus])

HSP 1 Score: 265.388 bits (677), Expect = 1.420e-74
Identity = 198/618 (32.04%), Postives = 307/618 (49.68%), Query Frame = 0
Query:   45 RQSMGM-PSRGVSRTSLGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAYGSH--VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGS-------GCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPI---TARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRR 649
            R SMG  PS G SR S+G +              PS  SS  S+   S S         + S G+R++T++G+    R D RP  DK ++ AS+  L  YLTDH YDQP ++K L RP+ +DF  I  FLFRQ+D N+R +G+ ED+V+ F K +RYPF ISK+S+ AVG   TWP ++ +I+W+V+ L YDE +      Q A     +           VDD + AD+K    YL +AY  FL+GDD+ +  +      + +      +   + LE   E +         +  +LP L++     LSD  K  SL+E++  HR  L  KV+KR EE   L   L  +      L+  +A QE S  D+     ER+RL +AL  A E K K  K  W A++EVS     L+     +  +A AL L+P     A N+    Y + +    +    + + ++  D++GVIRP+L ++K  ++ +    R  +  +L EE K EE + + ++E+E L  +VK++EE Y   K  ++  +A   S  +  E +           LE++ G + +RL ++ AE           +KA S+ +   + AL + KE  KR+
Sbjct:   65 RTSMGARPSMGTSRPSMGTS-------------RPSMGSSRQSAGRPSMSTAGD-----RKSVGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPSGRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEERERDKEDGVDD-QGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEYTEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSASDMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLD---QEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQVKRKEEAYNKSKYALDKQVAGGKSETEHEERR-----------LESQNG-SAERLDRVAAE-----------NKASSDVLRVQIEALKERKEMEKRQ 637          
BLAST of EWM24208.1 vs. NCBI_GenBank
Match: gi|754342241|ref|XP_004365505.2| (hypothetical protein CAOG_00634 [Capsaspora owczarzaki ATCC 30864] >gi|765548464|gb|KJE89085.1| hypothetical protein CAOG_000634 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 262.307 bits (669), Expect = 8.403e-74
Identity = 177/608 (29.11%), Postives = 307/608 (50.49%), Query Frame = 0
Query:   60 LGPNFDKVSKPQGRASLHPSSSSSSFSSTTASSSLRNSNGPPRKSSTGLRKSTAY---GSHVRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRITGKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPEDVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEE-VAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVEEQVLHLRSKVLVDLETRTGRNHQRLAQLEAELGLEREEHEQASKAISESIMGALHALADHKEEVKRRLGMFAGDRKLGKRL 663
            L P F   +K   R S+   +S  + ++     +       PR S +  R+S+ +    S + +DPRP +DK Y+  SIR L+++LT H Y    + K+L  P+  DF  +  FL+  +DA++   GKLEDE+   FK M+YPF ISK+S+ AVG+ HTWPTLL +++W+VEL+TY   V   A         G G    D   R+D +  FEYL +AY +FL+G D+ Y  L   L  +F+ R   +    + L  + +    E+     + + L  ++ R    +SD  KF   ++ L  H+     K++   +E+++  R L+ +     +L+A + AQ++SP DV R+ +ER ++DEAL  A   + +M +  WE E++V+R + ++E     +N  A  L +IP  A N++G+ +E+ ++       + P  ++ +D+    RP+L +++     + H+  T  L    E  + E E V E   E+  LE K  K E+  +AEK  +     E+S  +  +E+Q+  LR      L      + +++ + ++EL     + +Q     +  I+  L  +  HK  ++ RL      + +G R+
Sbjct:  102 LAPTFSNSAKKSSRKSITGRTSIGNANAFLGLGTGAERATQPRTSLS--RRSSIFDKPASSIVKDPRPLSDKTYMADSIRNLMSFLTQHGYSTAVNVKMLSSPSVTDFQRMFKFLYAHLDASYPFAGKLEDEIPVLFKRMKYPFTISKSSLFAVGSPHTWPTLLGALSWLVELVTYSMSVDPMA---CLFPSVGDG---FDQELRSDNQIFFEYLSRAYVSFLEGSDN-YDDLRAELANTFDARNVMIDRDVERLTQEKDAYLAEIEESR-KPSPLEAIEARRKLMVSDKDKFLKYVQNLEQHKVANERKLDDHAQEVTAAKRELDQLHQDRAQLQAQIDAQDMSPADVERITKERQQVDEALRAAVVAREEMERIAWEREMQVTRKIAEMEQMISAYNKLAETLMIIPTDAVNADGVDFEIQLNMNG----SNPHSVLNVDVNEHARPALTRLREKFTVQ-HQLATEQLASCQERLEQEAEMVTERETEVNVLESKAAKIEQEQRAEKEALLHEYKEQSDVILELEQQLKQLRMGANAGL----MESERQVKKAKSELDAALAQCDQEKNECNAVIVKTLELVTAHKTRIQERLAQV---KSVGARI 687          
The following BLAST results are available for this feature:
BLAST of EWM24208.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105597|gb|EWM24208.1|0.000e+0100.00Kinetochore protein Ndc80 [Nannochloropsis gaditan... [more]
gi|971506611|dbj|GAQ91593.1|2.863e-9835.66Centromere-associated protein HEC1 [Klebsormidium ... [more]
gi|159483571|ref|XP_001699834.1|2.076e-8131.25predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|325180865|emb|CCA15275.1|4.679e-8131.30predicted protein putative [Albugo laibachii Nc14][more]
gi|635363853|emb|CCI47640.1|7.896e-8030.09unnamed protein product [Albugo candida][more]
gi|545358450|ref|XP_005644796.1|2.835e-7832.14hypothetical protein COCSUDRAFT_25458 [Coccomyxa s... [more]
gi|545701193|ref|XP_005702932.1|3.120e-7828.48kinetochore protein NDC8 [Galdieria sulphuraria] >... [more]
gi|1072230877|gb|OEU15610.1|8.787e-7633.20hypothetical protein FRACYDRAFT_157212, partial [F... [more]
gi|299472165|emb|CBN77150.1|1.420e-7432.04Putative: similar to kinetochore associated 2 [Ect... [more]
gi|754342241|ref|XP_004365505.2|8.403e-7429.11hypothetical protein CAOG_00634 [Capsaspora owczar... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6485rna6485Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications