EWM24254.1, cds6446 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|585105645|gb|EWM24254.1| (bromodomain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 4617.76 bits (11976), Expect = 0.000e+0 Identity = 2260/2260 (100.00%), Postives = 2260/2260 (100.00%), Query Frame = 0
Query: 1 MAMTDHVIDPVSPVQELSENSVKESSEEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRKPQVVMRVFEFSHGKGGRGARAPTADSVQAGPGGRGGVGRCGGGGRGGRGGRGGRGGWRGGGRDAPTGLSSWLTKGSTARRGGSGRASPREWGAKSVASDGRDEVPTSAGGGGGGGEGGRGKNESEGVPLFSEYPGQHLNEPLDLEHFWSAVDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMARLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGEDQQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQRERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDERFCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYVDLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKYLLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPEALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPVLAEGGKARECLADGRDGGMDGRKEVGPTAPATIVNYPVRDDRGVQEEEGDGGSPDLSSPKECPSSAATLRASSMNGTADTVGREGMTEKVGGIVTAAAAARAIAPTSTSETAVASSPSEAGKKDAAALTPSSGARRLTRGSPSSGRRVPRSDSSSEDLLPERLQATLEGAIPEVLTAAQLVQEGDATRADPEGKGEERGMQVLDSKAGGAALGAGSQAAAETSKAGIVPAEVGSTAAVKCSDKPLAPSPTYALAPTPQVRADQCVVCSQSRGHTLKCCQEGCEARFHLLCAWFRGAYLSVELKDRGFGGGGETGEEYPAGLHVRAYCLQHCPTGARNRLEQVQLRAKYRLREADRHGPKRHHAHKKRSYSYGGMQAEKRLGGQQALSPDSYHRYACAICMEPKAKLVEPAETLPPPSTVLQSRNEQDSSSGQSGSAAIMKEDSDMRSAGQIAESNQGAGGAVMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEGWYFQAEGRGELPVVLCPGHVPIGVYRGLNGQYFDMQATANLRKNLDRARLIVDLVRKREKLKKALWRVDCDLSELRLGKLRVLLEGRILEMQNGRRLTEERLASYRRDLDALLARPLWAREAGEEALLAKKADGLDNSAAAAAGSTAATVVMMEDVKPAAHQKPSGGEVRCVDVDIHKESGAIPDRPLRGDWNASHSASDAVNDFGEVKGGAMGTDEPAKRRGRGGGFKGGKPSSEALESTLTKTAVTHRKRQEDNVAPLAAVDALVVENAAPAHADVIYDPGRPSKRGRRRMTQSDTGETCSVSAQHLELIKDYAPETSNMTGKRKKGEEEEEEGLLARDRFEALTEGKGLAAATFLAENGSPLWSAAGKRISACGRVDFEKTLALLIDPEDLRRREKGSQAMAPGSFKSKARITLDRQLMELVSALEDCSDGDGRDVSATFEIAPDPEAYPDYYDAVLHPMDLETIRHRVQTLFYVSLADFCKDVHQLVRNAKKFNAPRSRAYIDADFLKCFFEQKKEEVLQKEKEYRTLVQEEEEGQQGKSDGFGRDGGVRAKRRRFAGKDSAVCGYDLNRNSGINDIDTRAGKGKQKLKRKGGAGPTPRFTRHSHKNKKVCLVCAAGKDDSMPVVAQGQFHTCAECVRARPEAFVGRYVDVLWPDDDTWYAGMVKDFDRASGQHRILYDDGEWEFVYLHEQEMSFPEPVELRPGDLELSLRSPEPAIPLKEASSETRNGGRKLSPVSSQTGLGKAQVGLQGSDGKADASGGICENTNAARGLAGAGVEGPVGKMDDEETEDEEKRVQKKA 2260
MAMTDHVIDPVSPVQELSENSVKESSEEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRKPQVVMRVFEFSHGKGGRGARAPTADSVQAGPGGRGGVGRCGGGGRGGRGGRGGRGGWRGGGRDAPTGLSSWLTKGSTARRGGSGRASPREWGAKSVASDGRDEVPTSAGGGGGGGEGGRGKNESEGVPLFSEYPGQHLNEPLDLEHFWSAVDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMARLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGEDQQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQRERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDERFCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYVDLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKYLLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPEALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPVLAEGGKARECLADGRDGGMDGRKEVGPTAPATIVNYPVRDDRGVQEEEGDGGSPDLSSPKECPSSAATLRASSMNGTADTVGREGMTEKVGGIVTAAAAARAIAPTSTSETAVASSPSEAGKKDAAALTPSSGARRLTRGSPSSGRRVPRSDSSSEDLLPERLQATLEGAIPEVLTAAQLVQEGDATRADPEGKGEERGMQVLDSKAGGAALGAGSQAAAETSKAGIVPAEVGSTAAVKCSDKPLAPSPTYALAPTPQVRADQCVVCSQSRGHTLKCCQEGCEARFHLLCAWFRGAYLSVELKDRGFGGGGETGEEYPAGLHVRAYCLQHCPTGARNRLEQVQLRAKYRLREADRHGPKRHHAHKKRSYSYGGMQAEKRLGGQQALSPDSYHRYACAICMEPKAKLVEPAETLPPPSTVLQSRNEQDSSSGQSGSAAIMKEDSDMRSAGQIAESNQGAGGAVMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEGWYFQAEGRGELPVVLCPGHVPIGVYRGLNGQYFDMQATANLRKNLDRARLIVDLVRKREKLKKALWRVDCDLSELRLGKLRVLLEGRILEMQNGRRLTEERLASYRRDLDALLARPLWAREAGEEALLAKKADGLDNSAAAAAGSTAATVVMMEDVKPAAHQKPSGGEVRCVDVDIHKESGAIPDRPLRGDWNASHSASDAVNDFGEVKGGAMGTDEPAKRRGRGGGFKGGKPSSEALESTLTKTAVTHRKRQEDNVAPLAAVDALVVENAAPAHADVIYDPGRPSKRGRRRMTQSDTGETCSVSAQHLELIKDYAPETSNMTGKRKKGEEEEEEGLLARDRFEALTEGKGLAAATFLAENGSPLWSAAGKRISACGRVDFEKTLALLIDPEDLRRREKGSQAMAPGSFKSKARITLDRQLMELVSALEDCSDGDGRDVSATFEIAPDPEAYPDYYDAVLHPMDLETIRHRVQTLFYVSLADFCKDVHQLVRNAKKFNAPRSRAYIDADFLKCFFEQKKEEVLQKEKEYRTLVQEEEEGQQGKSDGFGRDGGVRAKRRRFAGKDSAVCGYDLNRNSGINDIDTRAGKGKQKLKRKGGAGPTPRFTRHSHKNKKVCLVCAAGKDDSMPVVAQGQFHTCAECVRARPEAFVGRYVDVLWPDDDTWYAGMVKDFDRASGQHRILYDDGEWEFVYLHEQEMSFPEPVELRPGDLELSLRSPEPAIPLKEASSETRNGGRKLSPVSSQTGLGKAQVGLQGSDGKADASGGICENTNAARGLAGAGVEGPVGKMDDEETEDEEKRVQKKA
Sbjct: 1 MAMTDHVIDPVSPVQELSENSVKESSEEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRKPQVVMRVFEFSHGKGGRGARAPTADSVQAGPGGRGGVGRCGGGGRGGRGGRGGRGGWRGGGRDAPTGLSSWLTKGSTARRGGSGRASPREWGAKSVASDGRDEVPTSAGGGGGGGEGGRGKNESEGVPLFSEYPGQHLNEPLDLEHFWSAVDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMARLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGEDQQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQRERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDERFCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYVDLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKYLLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPEALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPVLAEGGKARECLADGRDGGMDGRKEVGPTAPATIVNYPVRDDRGVQEEEGDGGSPDLSSPKECPSSAATLRASSMNGTADTVGREGMTEKVGGIVTAAAAARAIAPTSTSETAVASSPSEAGKKDAAALTPSSGARRLTRGSPSSGRRVPRSDSSSEDLLPERLQATLEGAIPEVLTAAQLVQEGDATRADPEGKGEERGMQVLDSKAGGAALGAGSQAAAETSKAGIVPAEVGSTAAVKCSDKPLAPSPTYALAPTPQVRADQCVVCSQSRGHTLKCCQEGCEARFHLLCAWFRGAYLSVELKDRGFGGGGETGEEYPAGLHVRAYCLQHCPTGARNRLEQVQLRAKYRLREADRHGPKRHHAHKKRSYSYGGMQAEKRLGGQQALSPDSYHRYACAICMEPKAKLVEPAETLPPPSTVLQSRNEQDSSSGQSGSAAIMKEDSDMRSAGQIAESNQGAGGAVMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEGWYFQAEGRGELPVVLCPGHVPIGVYRGLNGQYFDMQATANLRKNLDRARLIVDLVRKREKLKKALWRVDCDLSELRLGKLRVLLEGRILEMQNGRRLTEERLASYRRDLDALLARPLWAREAGEEALLAKKADGLDNSAAAAAGSTAATVVMMEDVKPAAHQKPSGGEVRCVDVDIHKESGAIPDRPLRGDWNASHSASDAVNDFGEVKGGAMGTDEPAKRRGRGGGFKGGKPSSEALESTLTKTAVTHRKRQEDNVAPLAAVDALVVENAAPAHADVIYDPGRPSKRGRRRMTQSDTGETCSVSAQHLELIKDYAPETSNMTGKRKKGEEEEEEGLLARDRFEALTEGKGLAAATFLAENGSPLWSAAGKRISACGRVDFEKTLALLIDPEDLRRREKGSQAMAPGSFKSKARITLDRQLMELVSALEDCSDGDGRDVSATFEIAPDPEAYPDYYDAVLHPMDLETIRHRVQTLFYVSLADFCKDVHQLVRNAKKFNAPRSRAYIDADFLKCFFEQKKEEVLQKEKEYRTLVQEEEEGQQGKSDGFGRDGGVRAKRRRFAGKDSAVCGYDLNRNSGINDIDTRAGKGKQKLKRKGGAGPTPRFTRHSHKNKKVCLVCAAGKDDSMPVVAQGQFHTCAECVRARPEAFVGRYVDVLWPDDDTWYAGMVKDFDRASGQHRILYDDGEWEFVYLHEQEMSFPEPVELRPGDLELSLRSPEPAIPLKEASSETRNGGRKLSPVSSQTGLGKAQVGLQGSDGKADASGGICENTNAARGLAGAGVEGPVGKMDDEETEDEEKRVQKKA 2260
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|553196316|ref|XP_005856317.1| (kinesin-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292738|gb|EKU20040.1| kinesin-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1285.01 bits (3324), Expect = 0.000e+0 Identity = 631/633 (99.68%), Postives = 631/633 (99.68%), Query Frame = 0
Query: 299 DGRDEVPTSAGGGGGGGEGGRGKNESEGVPLFSEYPGQHLNEPLDLEHFWSAVDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMARLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGEDQQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQRERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDERFCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYVDLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKYLLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPEALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPVLAEGGKARECLADGRDGGMDGRKEVGPTAPATIVNYPVRDDRGVQEEEGDGGSPDLSSPKECPSSAATLRASSMNGTADTV 931
DGRDEVPTSAGGGGGGGEGGRGK ESEGVPLFSEYPGQHLNEPLDLEHFWSAVDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMARLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGEDQQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQRERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDERFCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYVDLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKYLLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPEALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPVLAEGGKARECLADGRDGGMDGRKEVGPTAPATI NYPVRDDRGVQEEEGDGGSPDLSSPKECPSSAATLRASSMNGTADTV
Sbjct: 1 DGRDEVPTSAGGGGGGGEGGRGKKESEGVPLFSEYPGQHLNEPLDLEHFWSAVDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMARLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGEDQQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQRERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDERFCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYVDLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKYLLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPEALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPVLAEGGKARECLADGRDGGMDGRKEVGPTAPATIANYPVRDDRGVQEEEGDGGSPDLSSPKECPSSAATLRASSMNGTADTV 633 HSP 2 Score: 87.8113 bits (216), Expect = 1.378e-13 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 23 KESSEEDI---LCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMD--CHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMA 134
+E++ ED+ +C VC +G S N+IV CD CD++ HQ CYG+ +P G +FC C M+ + C+LC G K T G+W H+ CA+ P T + +D S +A
Sbjct: 406 REAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSALA 522
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|553196332|ref|XP_005856322.1| (hypothetical protein NGA_2112610, partial [Nannochloropsis gaditana CCMP526] >gi|422292743|gb|EKU20045.1| hypothetical protein NGA_2112610, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 265.003 bits (676), Expect = 1.408e-78 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 99 PTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRKPQVVMRVFEFSHGKGGRG 218
PTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRKPQVVMRVFEFSHGKGGRG
Sbjct: 1 PTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRKPQVVMRVFEFSHGKGGRG 120
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|145349414|ref|XP_001419129.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144579360|gb|ABO97422.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 147.902 bits (372), Expect = 3.175e-37 Identity = 65/140 (46.43%), Postives = 83/140 (59.29%), Query Frame = 0
Query: 32 CTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWCLL 171
C VC +G S +NQI+ CD CD++VHQ CYG+ IP G W CR C C LC GGALKPT G WAH+ CA W+P++ D +E I+ + + P R L C+IC+E AG C+QC G C + FHP C L
Sbjct: 1 CGVCFDGDSYDDNQILFCDKCDIAVHQLCYGIRKIPQGDWICRSCSSRGAAKT--CFLCTERGGALKPTVDGRWAHLFCAQWIPELFIQNVDSMEPINAAHLLPDRTNLTCVICREHGAGACIQCAYGNCSVPFHPMCAL 138 HSP 2 Score: 99.3673 bits (246), Expect = 3.201e-20 Identity = 45/104 (43.27%), Postives = 59/104 (56.73%), Query Frame = 0
Query: 716 CMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVDLSAL 819
C VCFDG S + N+I+FCD CD+A HQ CYG+ ++P+GD+ C C C LC E G K T+DG W HL CA P I N+ M P++ + L
Sbjct: 1 CGVCFDGDSYDDNQILFCDKCDIAVHQLCYGIRKIPQGDWICRSC----SSRGAAKTCFLCTERGGALKPTVDGRWAHLFCAQWIPELFIQNVDSMEPINAAHL 100 HSP 3 Score: 82.4185 bits (202), Expect = 2.753e-14 Identity = 48/141 (34.04%), Postives = 70/141 (49.65%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCA 1452
++ C +C++ VH C + P +WIC++C G+ +C LC RGG L PT D RW H FCA+ P +F + P AA + + + C IC AG C++CA+ +CSV FHP+CA
Sbjct: 15 ILFCDKCDIAVHQLCYGIRK------IPQGDWICRSC----SSRGAAKTCFLCTERGGALKPTVDG--RWAHLFCAQWI-PELFIQNVDSMEPINAAHLLPD-----RTNLTCVICREHGAGACIQCAYGNCSVPFHPMCA 137
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|575075734|dbj|BAO46222.1| (bromodomain and PHD finger containing, 1, partial [Anolis jubar]) HSP 1 Score: 142.51 bits (358), Expect = 5.302e-35 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 27 EEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELID-YSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWC 169
+ED +C +C +G + N I+ CD C+L+VHQ CYGV IP G+W CR C V C+LC + GGA K T G WAH+ CALW+P+V F LE ID + PAR L C IC+++ +G C+QC C+ +FH C
Sbjct: 21 DEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTC 163 HSP 2 Score: 113.62 bits (283), Expect = 6.626e-25 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 712 DDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVD 815
+D++C +C DG SN I+FCD C++A HQ CYG+P +PEG + C +CL + P R + C LCP G FK+T DG W H+VCA+ P N + + P+D
Sbjct: 22 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID 122 HSP 3 Score: 64.3142 bits (155), Expect = 9.827e-8 Identity = 41/146 (28.08%), Postives = 60/146 (41.10%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEGW 1457
++ C C + VH C P +W+C+ C+ Q CALCP +GG T+D RW H CA + F + V L +D A+ C IC ++ +G C++C +C FH C GW
Sbjct: 40 ILFCDMCNLAVHQECYG------VPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDG--RWAHVVCALWIPEVCFA---NTVF--LEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCXX-TGW 168
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|575075636|dbj|BAO46173.1| (bromodomain and PHD finger containing, 1, partial [Anolis sagrei]) HSP 1 Score: 142.51 bits (358), Expect = 5.784e-35 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 27 EEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELID-YSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWC 169
+ED +C +C +G + N I+ CD C+L+VHQ CYGV IP G+W CR C V C+LC + GGA K T G WAH+ CALW+P+V F LE ID + PAR L C IC+++ +G C+QC C+ +FH C
Sbjct: 21 DEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTC 163 HSP 2 Score: 113.62 bits (283), Expect = 7.298e-25 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 712 DDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVD 815
+D++C +C DG SN I+FCD C++A HQ CYG+P +PEG + C +CL + P R + C LCP G FK+T DG W H+VCA+ P N + + P+D
Sbjct: 22 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID 122 HSP 3 Score: 65.855 bits (159), Expect = 2.669e-8 Identity = 41/145 (28.28%), Postives = 60/145 (41.38%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEG 1456
++ C C + VH C P +W+C+ C+ Q CALCP +GG T+D RW H CA + F + V L +D A+ C IC ++ +G C++C +C FH CA G
Sbjct: 40 ILFCDMCNLAVHQECYG------VPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDG--RWAHVVCALWIPEVCFA---NTVF--LEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAXXAG 168
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|575075678|dbj|BAO46194.1| (bromodomain and PHD finger containing, 1, partial [Anolis allogus] >gi|575075680|dbj|BAO46195.1| bromodomain and PHD finger containing, 1, partial [Anolis allogus] >gi|575075688|dbj|BAO46199.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075694|dbj|BAO46202.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075698|dbj|BAO46204.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075700|dbj|BAO46205.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075702|dbj|BAO46206.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075706|dbj|BAO46208.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075716|dbj|BAO46213.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis]) HSP 1 Score: 142.124 bits (357), Expect = 7.883e-35 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 27 EEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELID-YSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWC 169
+ED +C +C +G + N I+ CD C+L+VHQ CYGV IP G+W CR C V C+LC + GGA K T G WAH+ CALW+P+V F LE ID + PAR L C IC+++ +G C+QC C+ +FH C
Sbjct: 21 DEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTC 163 HSP 2 Score: 113.235 bits (282), Expect = 9.293e-25 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 712 DDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVD 815
+D++C +C DG SN I+FCD C++A HQ CYG+P +PEG + C +CL + P R + C LCP G FK+T DG W H+VCA+ P N + + P+D
Sbjct: 22 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID 122 HSP 3 Score: 65.4698 bits (158), Expect = 3.392e-8 Identity = 41/145 (28.28%), Postives = 60/145 (41.38%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEG 1456
++ C C + VH C P +W+C+ C+ Q CALCP +GG T+D RW H CA + F + V L +D A+ C IC ++ +G C++C +C FH CA G
Sbjct: 40 ILFCDMCNLAVHQECYG------VPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDG--RWAHVVCALWIPEVCFA---NTVF--LEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAXXAG 168
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|575075732|dbj|BAO46221.1| (bromodomain and PHD finger containing, 1, partial [Anolis jubar]) HSP 1 Score: 142.124 bits (357), Expect = 7.960e-35 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 27 EEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELID-YSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWC 169
+ED +C +C +G + N I+ CD C+L+VHQ CYGV IP G+W CR C V C+LC + GGA K T G WAH+ CALW+P+V F LE ID + PAR L C IC+++ +G C+QC C+ +FH C
Sbjct: 21 DEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTC 163 HSP 2 Score: 113.235 bits (282), Expect = 9.383e-25 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 712 DDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVD 815
+D++C +C DG SN I+FCD C++A HQ CYG+P +PEG + C +CL + P R + C LCP G FK+T DG W H+VCA+ P N + + P+D
Sbjct: 22 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID 122 HSP 3 Score: 63.5438 bits (153), Expect = 1.797e-7 Identity = 40/145 (27.59%), Postives = 59/145 (40.69%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEG 1456
++ C C + VH C P +W+C+ C+ Q CALCP +GG T+D RW H CA + F + V L +D A+ C IC ++ +G C++C +C FH C G
Sbjct: 40 ILFCDMCNLAVHQECYG------VPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDG--RWAHVVCALWIPEVCFA---NTVF--LEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCXXQAG 168
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|575075664|dbj|BAO46187.1| (bromodomain and PHD finger containing, 1, partial [Anolis sagrei] >gi|575075684|dbj|BAO46197.1| bromodomain and PHD finger containing, 1, partial [Anolis allogus] >gi|575075708|dbj|BAO46209.1| bromodomain and PHD finger containing, 1, partial [Anolis homolechis] >gi|575075740|dbj|BAO46225.1| bromodomain and PHD finger containing, 1, partial [Anolis rubribarbus]) HSP 1 Score: 141.739 bits (356), Expect = 1.034e-34 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 27 EEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELID-YSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWC 169
+ED +C +C +G + N I+ CD C+L+VHQ CYGV IP G+W CR C V C+LC + GGA K T G WAH+ CALW+P+V F LE ID + PAR L C IC+++ +G C+QC C+ +FH C
Sbjct: 21 DEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTC 163 HSP 2 Score: 112.849 bits (281), Expect = 1.085e-24 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 712 DDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVD 815
+D++C +C DG SN I+FCD C++A HQ CYG+P +PEG + C +CL + P R + C LCP G FK+T DG W H+VCA+ P N + + P+D
Sbjct: 22 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID 122 HSP 3 Score: 65.0846 bits (157), Expect = 4.977e-8 Identity = 41/145 (28.28%), Postives = 60/145 (41.38%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEG 1456
++ C C + VH C P +W+C+ C+ Q CALCP +GG T+D RW H CA + F + V L +D A+ C IC ++ +G C++C +C FH CA G
Sbjct: 40 ILFCDMCNLAVHQECYG------VPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDG--RWAHVVCALWIPEVCFA---NTVF--LEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAXQAG 168
BLAST of EWM24254.1 vs. NCBI_GenBank
Match: gi|575075646|dbj|BAO46178.1| (bromodomain and PHD finger containing, 1, partial [Anolis sagrei]) HSP 1 Score: 141.739 bits (356), Expect = 1.044e-34 Identity = 64/144 (44.44%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 27 EEDILCTVCGEGHSEVENQIVLCDHCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPTTSGDWAHIQCALWLPDVTFTQPDKLELID-YSRMAPARRTLKCMICQEKKAGPCVQCPVGKCHISFHPWC 169
+ED +C +C +G + N I+ CD C+L+VHQ CYGV IP G+W CR C V C+LC + GGA K T G WAH+ CALW+P+V F LE ID + PAR L C IC+++ +G C+QC C+ +FH C
Sbjct: 21 DEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTC 163 HSP 2 Score: 112.849 bits (281), Expect = 1.074e-24 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query: 712 DDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEVPEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLCPRSRITNLMDMGPVD 815
+D++C +C DG SN I+FCD C++A HQ CYG+P +PEG + C +CL + P R + C LCP G FK+T DG W H+VCA+ P N + + P+D
Sbjct: 22 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPID 122 HSP 3 Score: 65.0846 bits (157), Expect = 5.025e-8 Identity = 41/145 (28.28%), Postives = 60/145 (41.38%), Query Frame = 0
Query: 1312 VMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVGDEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHSPVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPLCAKLEG 1456
++ C C + VH C P +W+C+ C+ Q CALCP +GG T+D RW H CA + F + V L +D A+ C IC ++ +G C++C +C FH CA G
Sbjct: 40 ILFCDMCNLAVHQECYG------VPYIPEGQWLCRRCL---QSPSRAVDCALCPNKGGAFKQTDDG--RWAHVVCALWIPEVCFA---NTVF--LEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAXQAG 168 The following BLAST results are available for this feature:
BLAST of EWM24254.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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