EWM24220.1, cds6444 (CDS) Nannochloropsis gaditana

Overview
NameEWM24220.1
Unique Namecds6444
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:554046..554109 +
Alignment locationCM002468.1:555123..556637 +
Alignment locationCM002468.1:556680..556882 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24220.1
Productalanine-2-oxoglutarate aminotransferase 2
Orig transcript idgnl|cribi|Naga_100020g17.5353.mrna
GeneOsNAAT1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:554046..554109 +
CM002468.1supercontigCM002468.1:555123..556637 +
CM002468.1supercontigCM002468.1:556680..556882 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015422PyrdxlP-dep_Trfase_major_sub2
IPR004839Aminotransferase_I/II
Homology
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|585105611|gb|EWM24220.1| (alanine-2-oxoglutarate aminotransferase 2 [Nannochloropsis gaditana])

HSP 1 Score: 1231.85 bits (3186), Expect = 0.000e+0
Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 0
Query:    1 MAFVCIGSDKEKYNSMMSNTDITHEHAIVGNLLPTSTYTRGTKNMAAQPRVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTGRGTDSRDVKRAEQQESEVNWMIPAHRPDMPKSYYRSDSGRTGRDVTCFASLQYVLFSIIIDTFDLPLSLR 593
            MAFVCIGSDKEKYNSMMSNTDITHEHAIVGNLLPTSTYTRGTKNMAAQPRVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTGRGTDSRDVKRAEQQESEVNWMIPAHRPDMPKSYYRSDSGRTGRDVTCFASLQYVLFSIIIDTFDLPLSLR
Sbjct:    1 MAFVCIGSDKEKYNSMMSNTDITHEHAIVGNLLPTSTYTRGTKNMAAQPRVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTGRGTDSRDVKRAEQQESEVNWMIPAHRPDMPKSYYRSDSGRTGRDVTCFASLQYVLFSIIIDTFDLPLSLR 593          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|298714844|emb|CBJ25743.1| (nicotinanamine aminotransferase A [Ectocarpus siliculosus])

HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0
Identity = 302/473 (63.85%), Postives = 367/473 (77.59%), Query Frame = 0
Query:   46 AAQPRVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEY 518
            A+  +VL YD++ + VK C+YAVRGE+Y AATER+ AGKEVIFTNVGNPHGLGQKP+TF+RQV ALV APFLLE P V  +FP D IARA+ Y+    GG GAYSDSKG P VRQE  DF++RRDG  +  D IFLTNGASEAVRL L   +RGP DG++VP+PQYPLYSA++ L SG+ VGY L E  GW LD   L  A+ +A+R G+ +R +VFINPGNPTG CL+ +DL  LV+FAY ++LVLMADEVYQ+NIYQ+  PF S + V   MG PY+  +EL +FHT SKGVYGECG RGG MEL N D+RV+DE+YKL SINLSPNV GQV +G+M N P+PG ESYA + REK+ LL SL RRAR+I DAFN  +G+ C+ETEGA+Y+FPKI LP AA+ AAKAAGK+PDVFYCL+LL+ TG+S VPGSGF Q +GT+HFRTTILP E  FQ ++  F +FH  FMA+Y
Sbjct:    3 ASGGKVLTYDTIAECVKDCQYAVRGEIYLAATERIKAGKEVIFTNVGNPHGLGQKPLTFLRQVMALVMAPFLLEDPRVSDMFPGDAIARAREYLVHVKGGFGAYSDSKGNPYVRQEVCDFIERRDGHRTSPDNIFLTNGASEAVRLVLRTAIRGPSDGVMVPVPQYPLYSASVALYSGTFVGYNLCEAKGWGLDTASLNNALNEARRNGITLRALVFINPGNPTGNCLTVEDLRQLVRFAYDNRLVLMADEVYQENIYQSKTPFTSCKKVLAEMGYPYSSSVELVSFHTVSKGVYGECGLRGGYMELTNIDQRVSDEMYKLCSINLSPNVTGQVAMGIMCNPPKPGSESYALHMREKEVLLQSLIRRARSIVDAFNGLDGVTCEETEGALYAFPKIDLPRAAIDAAKAAGKAPDVFYCLELLKETGLSCVPGSGFGQAEGTYHFRTTILPAEDTFQSVVDGFTSFHRGFMAKY 475          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|922554809|ref|XP_013605461.1| (PREDICTED: glutamate--glyoxylate aminotransferase 1 [Brassica oleracea var. oleracea] >gi|923876605|ref|XP_013711295.1| PREDICTED: glutamate--glyoxylate aminotransferase 1-like [Brassica napus])

HSP 1 Score: 609.372 bits (1570), Expect = 0.000e+0
Identity = 286/472 (60.59%), Postives = 356/472 (75.42%), Query Frame = 0
Query:   52 LNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            L YD L ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  +FP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG  DGILVP+PQYPLYSA I LL GS+V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L+ ++KF Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++G++L +FHT SKG +GECG RGG  E+ NF  RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FMA+Y+   G
Sbjct:    3 LEYDLLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGEGDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLKEILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNFPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMAQYENGFG 474          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|1072908188|ref|XP_018436204.1| (PREDICTED: glutamate--glyoxylate aminotransferase 1-like [Raphanus sativus])

HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0
Identity = 285/472 (60.38%), Postives = 356/472 (75.42%), Query Frame = 0
Query:   52 LNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            L Y+SL ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+HP+V  +FP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG +DGILVP+PQYPLYSA I LL GS+V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L  +++F Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++ ++L +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRAR +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FM +Y+ S G
Sbjct:    3 LEYESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDHPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGERDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLREILRFCYSEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRARIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYENSFG 474          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|565499476|ref|XP_006307377.1| (hypothetical protein CARUB_v10009003mg [Capsella rubella] >gi|482576088|gb|EOA40275.1| hypothetical protein CARUB_v10009003mg [Capsella rubella])

HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0
Identity = 284/474 (59.92%), Postives = 356/474 (75.11%), Query Frame = 0
Query:   50 RVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            + L+YD+L ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  IFP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG  DGILVP+PQYPLYSA I LL G++V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L  ++KF Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++G++L +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FM +Y  + G
Sbjct:    4 KALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMIFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGDGDGILVPVPQYPLYSATISLLGGTLVPYYLDESENWGLDVNNLRQSVAQARSQGITVRAMVIINPGNPTGQCLSEANLREILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYDNNVG 477          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|297339119|gb|EFH69536.1| (alanine-2-oxoglutarate aminotransferase 1 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0
Identity = 283/474 (59.70%), Postives = 357/474 (75.32%), Query Frame = 0
Query:   50 RVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            + L+YD+L ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  +FP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG  DGILVP+PQYPLYSA I LL G++V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  ++  ++KF Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++G++L +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+++GLMV+ P+PGD SY Q+ARE + +L+SLRRRAR +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FM +Y  + G
Sbjct:    4 KALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGDGDGILVPVPQYPLYSATISLLGGTLVPYYLDESQNWGLDVNNLRQSVAQARSQGITVRAMVIINPGNPTGQCLSEANIREILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMEMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNLPPRVVEEIYKVASIALSPNVSAQILMGLMVSPPKPGDISYDQFARESKGILESLRRRARIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGAIQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYDNNVG 477          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|685348814|ref|XP_009110107.1| (PREDICTED: glutamate--glyoxylate aminotransferase 1 [Brassica rapa])

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 285/472 (60.38%), Postives = 356/472 (75.42%), Query Frame = 0
Query:   52 LNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            L YD L ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  +FP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG  DGILVP+PQYPLYSA I LL GS+V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L+ ++KF Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++G++L +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK+PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FMA+Y+   G
Sbjct:    3 LEYDLLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGEGDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLKEILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKAPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMAQYENGFG 474          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|1190948868|ref|XP_020867671.1| (glutamate--glyoxylate aminotransferase 1 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0
Identity = 283/474 (59.70%), Postives = 356/474 (75.11%), Query Frame = 0
Query:   50 RVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            + L+YD+L ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  +FP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG  DGILVP+PQYPLYSA I LL G++V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  ++  ++KF Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++G++L +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRAR +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FM +Y  + G
Sbjct:    4 KALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGDGDGILVPVPQYPLYSATISLLGGTLVPYYLDESQNWGLDVNNLRQSVAQARSQGITVRAMVIINPGNPTGQCLSEANIREILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMEMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNLPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRARIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGAIQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYDNNVG 477          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|923922679|ref|XP_013730520.1| (PREDICTED: glutamate--glyoxylate aminotransferase 1 [Brassica napus] >gi|674891275|emb|CDY41452.1| BnaA08g20540D [Brassica napus])

HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0
Identity = 285/472 (60.38%), Postives = 354/472 (75.00%), Query Frame = 0
Query:   52 LNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            L YD L ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  +FP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG  DGILVP+PQYPLYSA I LL GS+V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L+ ++KF Y  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++G++L +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FMA+Y    G
Sbjct:    3 LEYDLLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGEGDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLKEILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMAQYDNGFG 474          
BLAST of EWM24220.1 vs. NCBI_GenBank
Match: gi|685362419|ref|XP_009115544.1| (PREDICTED: glutamate--glyoxylate aminotransferase 1-like [Brassica rapa] >gi|923556109|ref|XP_013738229.1| PREDICTED: glutamate--glyoxylate aminotransferase 1-like [Brassica napus] >gi|674888515|emb|CDY44130.1| BnaA09g31220D [Brassica napus] >gi|674928549|emb|CDY04729.1| BnaC05g18600D [Brassica napus])

HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0
Identity = 284/472 (60.17%), Postives = 356/472 (75.42%), Query Frame = 0
Query:   52 LNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTG 523
            L Y+SL ++VK C+YAVRGELY  A+E    GK++IFTNVGNPH LGQKP+TF RQV AL  APFLL+ P+V  IFP D IARAK Y+    GG+GAYSDS+GLP VR+E A+F+QRRDG+ SD + IFLT+GAS+ V   L  ++RG +DGILVP+PQYPLYSA I LL GS+V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L  +++F +  KLVL+ DEVYQ NIYQ  RPF+S++ V + MGSP+++ ++L +FHT SKG +GECG RGG  E+ NF  RV +E+YK+ASI LSPNV  Q+ +GLMV+ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LPP A+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +  +I+  F  F+  FM +Y+ S G
Sbjct:    3 LEYESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMIFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGERDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLREILRFCHSEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNFPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIKLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYENSFG 474          
The following BLAST results are available for this feature:
BLAST of EWM24220.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105611|gb|EWM24220.1|0.000e+0100.00alanine-2-oxoglutarate aminotransferase 2 [Nannoch... [more]
gi|298714844|emb|CBJ25743.1|0.000e+063.85nicotinanamine aminotransferase A [Ectocarpus sili... [more]
gi|922554809|ref|XP_013605461.1|0.000e+060.59PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
gi|1072908188|ref|XP_018436204.1|0.000e+060.38PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
gi|565499476|ref|XP_006307377.1|0.000e+059.92hypothetical protein CARUB_v10009003mg [Capsella r... [more]
gi|297339119|gb|EFH69536.1|0.000e+059.70alanine-2-oxoglutarate aminotransferase 1 [Arabido... [more]
gi|685348814|ref|XP_009110107.1|0.000e+060.38PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
gi|1190948868|ref|XP_020867671.1|0.000e+059.70glutamate--glyoxylate aminotransferase 1 [Arabidop... [more]
gi|923922679|ref|XP_013730520.1|0.000e+060.38PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
gi|685362419|ref|XP_009115544.1|0.000e+060.17PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6460rna6460Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications