EWM24287.1, cds6438 (CDS) Nannochloropsis gaditana

Overview
NameEWM24287.1
Unique Namecds6438
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:540034..541293 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24287.1
Productrmd5 like protein
Orig transcript idgnl|cribi|Naga_100020g23.5420.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:540034..541293 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027711Rmd5
IPR027370Znf-RING_LisH
IPR024964CTLH/CRA
IPR013083Znf_RING/FYVE/PHD
IPR013144CRA_dom
Homology
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|585105678|gb|EWM24287.1| (rmd5 like protein [Nannochloropsis gaditana])

HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query:    1 MCDSLLTELTRLREKQRQNTEIMLRLVNSVGAALEDSLGEPTTPQVPHSSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFLDATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSKGDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            MCDSLLTELTRLREKQRQNTEIMLRLVNSVGAALEDSLGEPTTPQVPHSSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFLDATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSKGDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF
Sbjct:    1 MCDSLLTELTRLREKQRQNTEIMLRLVNSVGAALEDSLGEPTTPQVPHSSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFLDATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSKGDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|443719683|gb|ELU09727.1| (hypothetical protein CAPTEDRAFT_159757, partial [Capitella teleta])

HSP 1 Score: 218.009 bits (554), Expect = 2.384e-63
Identity = 148/428 (34.58%), Postives = 225/428 (52.57%), Query Frame = 0
Query:    3 DSLLTELTRLREKQRQNTEIMLRLVNSVGAALED-------SLGEPTTPQVPHSSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFLDATPPVFMCRPLRKEDR-GLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGR-LDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            D +LT+   +R       + +L  VN++   +ED       + G+          ++D +  +   HK  H  +SK+ K++DR F+     V       KE++   ++Q++ +H  R+G    A  LV+E+GL    ++ Q  E    +H ++ A  K+ +L PA  WA  HR  L H  S+LEFKL RL F+ LV    SQG      AK++E                  A+ FAR + APFA     + +E++ LMG+LLY  + LD SPY+  L P  W D  +    E C +LGL +ES+LSV  +A   A+ PL  ++QV+L  +  G W A +ELP  I+ G D   RFHS+F+CP+ ++Q++ +NPP+ L CGHVI R++L +L     A G      ++ KC  CPVEQ   DA+QI+F
Sbjct:   12 DKVLTKFDDIRRNSSTTIDDLLNHVNNIRREIEDGGTSGTINPGQAILLSQTVKRIQDSLGHVSADHKDLHGNVSKVGKAIDRNFVSDFNSVCNETAFAKEEQTSEINQVICEHFLRQGMLDIAESLVEESGL---EIHDQQIEPFLELHRILEAL-KQHNLSPALHWAQAHRNELTHHRSSLEFKLLRLNFIDLV----SQGV-----AKQQE------------------ALHFAR-NFAPFA---SSHTKELQVLMGTLLYLRQGLDSSPYRHLLDPIHWVDICDVFTREACTLLGLSMESALSVIVKAGCAALPPLLTIKQVMLQRQCSGVWSAKDELPVEIDIGVDC--RFHSIFACPILKQQSNDSNPPVRLICGHVISRDALQKL-----ANG------NKVKCPYCPVEQAPSDARQIFF 391          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|762095499|ref|XP_011430253.1| (PREDICTED: protein RMD5 homolog A [Crassostrea gigas] >gi|405961428|gb|EKC27232.1| hypothetical protein CGI_10014376 [Crassostrea gigas])

HSP 1 Score: 216.468 bits (550), Expect = 9.430e-63
Identity = 141/428 (32.94%), Postives = 222/428 (51.87%), Query Frame = 0
Query:    3 DSLLTELTRLREKQRQNTEIMLRLVNSVGAALEDSLGE----PTTPQVPHSSLEDI---MPQLVQQHKTYHAALSKMTKSVDRVFL-DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGR-LDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            D +L++   LR+  ++N E ++  + ++   L D+  E    PT   +   ++  I   + ++ Q+HK  H+ +SK+ KSVDR F+ D T     C    +E R L+++++ +H  R+G    A  L+++A L  +A   +  E    +H ++ A  K+RDL PA  WA E+R+ L  + S+LEFKL RL+F+ L+    S   +A + ++          E  A  H  DL I                       LMGS+LY  + ++ SPY   LAP  W +  +    + C +LG+ VES LSV  RA   A+ PL  +RQV+   +  G W   EELP  I+ GR+   R+HS+F+CP+ R+Q++  NPPM L CGHVI R++L +L              ++ KC  CPVEQ   DA+Q++F
Sbjct:   12 DRVLSKFGGLRDHSKKNLEELISSIQNIQRELNDAPEEHEITPTQSLILMQTIRKIKEAISRMGQEHKDLHSTVSKVGKSVDRNFVTDFTSISQECNFEEEEKRFLLNEVISEHFMRQGMLHIADALIEDADLEIAA---EKKEPFLELHRILGAL-KQRDLIPALRWAEENRDNLNEIRSSLEFKLHRLRFIDLLKQGPSHQSQALQYSR--------NFEAFADRHTRDLQI-----------------------LMGSMLYLQQGIENSPYSHLLAPIYWDEICDVFTRDACTLLGMSVESPLSVSIRAGCLALPPLLNIRQVMQQRQVSGVWSNKEELPVEIDLGRE--YRYHSIFACPILRQQSTEVNPPMRLICGHVISRDALGKL-----------SNNNKVKCPYCPVEQLPSDAKQVFF 391          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|646693495|gb|KDR07718.1| (RMD5-like protein A [Zootermopsis nevadensis])

HSP 1 Score: 216.083 bits (549), Expect = 1.598e-62
Identity = 138/413 (33.41%), Postives = 210/413 (50.85%), Query Frame = 0
Query:   11 RLREKQRQNTEIMLRLVNSVGAALEDSLGEPTTPQVPHSSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFLDATPPVFMCRPLRKEDR-GLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLY-AGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            R+ E   +NTE +   ++ V    E +  +    +   + + D + ++  +H+  H+ +SK+ K++DR F+               D+  L++Q++ QH YR+G    A +L QEAGL       +    L R+ + +    K+RDL PA  WA  HRE L    S+LEFKL RLQF+ L+                       G  G+A       AI +AR H   F      + +E++ LMG  L+    ++ SPY R L P LW +  +    + C +LGL V+S LSVC  A   A+  L  ++QV+   +  G W   +ELP  I+ G+DS  R+HSVF+CP+ R+Q++ +NPPM L CGHVI R++LN+L          S G ++ KC  CPVEQ   DA+ I+F
Sbjct:   27 RVLEDLMRNTESLKNEIDLVPPGHELTAAQIVILRQTMNKIRDTVHRIASEHRDLHSTVSKVGKAIDRSFVADFASTSREDVFSGSDKVQLLNQVICQHFYRQGMLDIADELAQEAGLKMEDGGKEPFSELNRILDSL----KQRDLSPALEWAQSHRESLDTQNSSLEFKLHRLQFIDLIQR---------------------GHTGQAE------AIHYARTHFQQFI---NKHEKEIQSLMGMFLFLPNGINSSPYSRLLEPNLWVEIYDVFTRDACSLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWNGKDELPIEIDLGQDS--RYHSVFACPILRQQSTESNPPMRLICGHVISRDALNKL----------SNG-NKLKCPYCPVEQNPSDARHIFF 392          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|972198673|ref|XP_015181316.1| (PREDICTED: protein RMD5 homolog A isoform X1 [Polistes dominula])

HSP 1 Score: 215.698 bits (548), Expect = 2.235e-62
Identity = 136/379 (35.88%), Postives = 199/379 (52.51%), Query Frame = 0
Query:   49 SSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFL-----DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLY-AGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            S + DI+ +L   H+  H+ +SK+ K++DR F+      +   VF       E   L++Q++ QH YR+G    A +L  EAG+ +     +    L  + + +    K+R+L PA  WA +HRE L    S+LEFKL RL F++LV     QG   + +A                       I +AR++L  F    G + +EV+ LMG+LLY    ++ SPY   L P LW D  +    E C +LGL V+S LSVC  A   A+  L  ++QV+   +  G W   +ELP  I+ G+ S  R+HSVF+CP+ R+Q++  NPPM L CGHVI R++LN+L    T   +      R KC  CPVEQ  +DA+ IYF
Sbjct:   65 SKVRDIVQRLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVFS----GPEKSHLLNQVICQHFYRQGMLDIADELATEAGIKTDEGRKEPFTELNYILDCL----KQRNLEPALEWAKKHREALLAQNSSLEFKLHRLHFIRLV----QQGPTKQTEA-----------------------IMYARQNLTQFV---GRHEKEVQALMGTLLYLPNGIESSPYSHLLDPTLWLDIHDVFTKEACTLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWSGKDELPIEIDLGKQS--RYHSVFACPILRQQSTENNPPMKLVCGHVISRDALNKL----TNANKYVSITRRLKCPYCPVEQNPEDARLIYF 399          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|954558094|ref|XP_014602719.1| (PREDICTED: protein RMD5 homolog A isoform X1 [Polistes canadensis])

HSP 1 Score: 214.542 bits (545), Expect = 7.168e-62
Identity = 135/379 (35.62%), Postives = 199/379 (52.51%), Query Frame = 0
Query:   49 SSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFL-----DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLY-AGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            S + DI+ +L   H+  H+ +SK+ K++DR F+      +   VF       E   L++Q++ QH YR+G    A +L  EAG+ +     +    L  + + +    K+R+L PA  WA +HRE L    S+LEFKL RL F++LV     QG   + +A                       I +AR++L  F    G + +EV+ LMG+LLY    ++ SPY   L P LW D  +    E C +LGL V+S LSVC  +   A+  L  ++QV+   +  G W   +ELP  I+ G+ S  R+HSVF+CP+ R+Q++  NPPM L CGHVI R++LN+L     A    +    R KC  CPVEQ  +DA+ IYF
Sbjct:   65 SKVRDIVQRLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVFS----GPEKSHLLNQVICQHFYRQGMLDIADELATEAGIKTDEGRKEPFTELNYILDCL----KQRNLEPALEWAKKHREALLAQNSSLEFKLHRLHFIRLV----QQGPTKQTEA-----------------------IMYARQNLTQFV---GRHEKEVQALMGTLLYLPNGIESSPYSHLLDPTLWLDIHDVFTKEACTLLGLSVDSPLSVCINSGCTALPALLNIKQVMQQRQVTGIWSGKDELPIEIDLGKQS--RYHSVFACPILRQQSTENNPPMKLVCGHVISRDALNKL---TNANKYVASISRRLKCPYCPVEQNPEDARLIYF 400          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|665790779|ref|XP_008561091.1| (PREDICTED: protein RMD5 homolog A isoform X1 [Microplitis demolitor])

HSP 1 Score: 213.001 bits (541), Expect = 2.146e-61
Identity = 133/380 (35.00%), Postives = 196/380 (51.58%), Query Frame = 0
Query:   49 SSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFL-----DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVA-GDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGR-LDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            + + D + +L   H+  H+A+SK+ K++DR F+      +   VF       E   L++Q++ QH YR+G    A +L  E G+ +     +    L ++ + +    K+R+L PA  WA  HRE L    S+LEFKL RLQF++LV  G  SQ +                            A+ +AR++L  F      + +EV+ LMG+LLY    +  SPY   L P LW D  +    E C +LGL V+S LSVC  A   A+  L  ++QV+   +    W   +ELP  I+ G+ S  R+HSVF+CP+ R+Q++  NPPM L CGHVI R++LN+L          +Q   R KC  CPVEQ  +DA+ IYF
Sbjct:   65 TKVRDTVHRLATDHREAHSAVSKVGKAIDRNFIADFASTSREDVFN----GAEKTQLLNQVICQHFYRQGMLDIAEELASETGIKTDDSKKEPFTELNKILDCL----KQRNLEPALEWAKNHREALLAQNSSLEFKLHRLQFIRLVQQGPSSQAE----------------------------AVMYARKNLTQFV---SRHEKEVQSLMGTLLYLPNGIQSSPYSHLLDPNLWLDIHDVFTKEACTLLGLSVDSPLSVCVNAGCTALPALLNIKQVMQQRQVTNIWNGKDELPIEIDLGKQS--RYHSVFACPILRQQSTENNPPMKLVCGHVISRDALNKL-----TNSNKNQFVSRLKCPYCPVEQNPEDARLIYF 398          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|755926927|ref|XP_011302505.1| (PREDICTED: protein RMD5 homolog A isoform X1 [Fopius arisanus])

HSP 1 Score: 213.001 bits (541), Expect = 2.439e-61
Identity = 141/433 (32.56%), Postives = 216/433 (49.88%), Query Frame = 0
Query:    3 DSLLTELTRLREKQRQNTEIMLRLVNSVGAALEDSLGE----PTTPQVPHSSLE---DIMPQLVQQHKTYHAALSKMTKSVDRVFL-----DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLV-AGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLY-AGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            D +L +   + EK  +    ++  + ++   LE++  E    P+  Q+   +++   D +  L   H+  H  +SK+ K++DR F+      +   VF       E   L++Q++ QH YR+G    A +L  E G+ +     +    L  + + +    K+R+L PA  W   HR+ L+   S+LEFKL RLQF++LV  G  SQ +                            A+ +AR+HL  F      + +EV+ LMG+LLY    +  SPY   L P LW D  +    E C +LGL V+S LSVC  A   A+  L  ++QV+   +  G W   +ELP  I+ G+ S  R+HSVF+CP+ R+Q++  NPPM L CGHVI R++LN+L          +Q   R KC  CPVEQ  +DA+ IYF
Sbjct:   12 DKVLRKFEDINEKAGEVLSDLINQIETLKRELEEAPPEQELTPSQVQILKQAMKKVRDTVQDLATNHRESHNTVSKVGKAIDRNFIADFASTSREDVFNS----AEKTHLLNQVICQHFYRQGMLDIADELAAETGIKTEEGRKEPFTELNYILDCL----KQRNLEPALEWTYNHRDALRAQNSSLEFKLHRLQFIRLVEQGPSSQAE----------------------------AVMYARKHLTQFV---NRHEKEVQSLMGTLLYLPNGIQASPYSHLLDPTLWLDIHDVFTKEACTLLGLSVDSPLSVCVNAGCTALPALLNIKQVMQQRQVTGIWNGKDELPIEIDLGKQS--RYHSVFACPILRQQSTENNPPMKLVCGHVISRDALNKL-----TNSNKNQFVSRLKCPYCPVEQNPEDARLIYF 398          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|936695639|ref|XP_014225799.1| (PREDICTED: protein RMD5 homolog A isoform X1 [Trichogramma pretiosum])

HSP 1 Score: 213.001 bits (541), Expect = 2.599e-61
Identity = 139/405 (34.32%), Postives = 206/405 (50.86%), Query Frame = 0
Query:   26 LVNSVGAALEDSLGEPTTPQVPHSSL---EDIMPQLVQQHKTYHAALSKMTKSVDRVFL-----DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLY-AGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            L   +  A ED    P   QV   ++    D + +L   H+  H+ +SK+ K++DR F+      +   VF       E   L++Q++ QH YR+G    A +L  EAG+ +     +    L  + + +    K+++L PA  WA  HR+ L    S+LEFKL RLQF++LV          E  +K+ E                  AI++AR+HL  F      + +EV+ LMG+LLY    +  SPY   L P LW D  +    E C +LGL V+S LSVC  A + A+  L  ++QV+   +  G W   +ELP  I+ G+    R+HSVF+CP+ R+Q++  NPPM L CGHVI R++LN+L          +Q   R KC  CPV+Q  +DA+ IYF
Sbjct:   39 LSKEIEEAPEDQQLTPEQVQVLKQAMTKARDTVARLATDHRELHSTVSKVGKAIDRNFIADFASTSREDVFA----GAEKTHLLNQVICQHFYRQGMLDIADELAAEAGIKTDEGRKEPFTELNYILDCL----KQKNLDPALEWATRHRDALIAQNSSLEFKLHRLQFIRLVQ---------EGPSKQSE------------------AITYARKHLTQFV---NRHEKEVQSLMGTLLYLPNGIQSSPYSHLLDPMLWLDIHDVFTKEACTLLGLSVDSPLSVCINAGITALPALLNIKQVMQQRQVSGIWSGKDELPIEIDLGKQG--RYHSVFACPILRQQSTENNPPMKLVCGHVISRDALNKL-----TNANKNQFVSRLKCPYCPVDQNPEDARLIYF 398          
BLAST of EWM24287.1 vs. NCBI_GenBank
Match: gi|749731036|ref|XP_011149860.1| (PREDICTED: protein RMD5 homolog A isoform X1 [Harpegnathos saltator])

HSP 1 Score: 212.231 bits (539), Expect = 4.064e-61
Identity = 137/379 (36.15%), Postives = 201/379 (53.03%), Query Frame = 0
Query:   49 SSLEDIMPQLVQQHKTYHAALSKMTKSVDRVFL-----DATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGDGSQGKRAEEDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGR-LDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSK--GDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQHRFKCFICPVEQTLQDAQQIYF 419
            + + D + +L   H+  H+ +SK+ K++DR F+      +   VF C P   E   L++Q++ QH YR+G    A +L  EAG+ +     +    L  + + +    K+R+L PA  WA +HRE L    S+LEFKL RLQF++LV     QG       K+ E                  AI +AR++L  F    G + +EV+ LMG+LLY    +  SPY   L P LW +  +    E C +LGL V+S LSVC  A   A+  L  ++QV+   +  G W   +ELP  I+ G+    R+HSVF+CP+ R+Q++ +NPPM L CGHVI R++LN+L          +Q   R KC  CPVEQ  +DA+ IYF
Sbjct:   65 TKVRDTVIKLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVF-CGP---EKSHLLNQVICQHFYRQGMLDIADELAAEAGIKTDEGRKEPFTELNFILDCL----KQRNLEPALEWAKKHREALMAQNSSLEFKLHRLQFIRLV----QQGP-----CKQTE------------------AILYARQNLTRFV---GRHEKEVQSLMGTLLYLPHGIQSSPYSHLLNPTLWLEIHDVFTREACMLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWNGKDELPIEIDLGKQG--RYHSVFACPILRQQSTESNPPMKLVCGHVISRDALNKL-----TNANKNQFVSRLKCPYCPVEQNPEDARLIYF 398          
The following BLAST results are available for this feature:
BLAST of EWM24287.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105678|gb|EWM24287.1|0.000e+0100.00rmd5 like protein [Nannochloropsis gaditana][more]
gi|443719683|gb|ELU09727.1|2.384e-6334.58hypothetical protein CAPTEDRAFT_159757, partial [C... [more]
gi|762095499|ref|XP_011430253.1|9.430e-6332.94PREDICTED: protein RMD5 homolog A [Crassostrea gig... [more]
gi|646693495|gb|KDR07718.1|1.598e-6233.41RMD5-like protein A [Zootermopsis nevadensis][more]
gi|972198673|ref|XP_015181316.1|2.235e-6235.88PREDICTED: protein RMD5 homolog A isoform X1 [Poli... [more]
gi|954558094|ref|XP_014602719.1|7.168e-6235.62PREDICTED: protein RMD5 homolog A isoform X1 [Poli... [more]
gi|665790779|ref|XP_008561091.1|2.146e-6135.00PREDICTED: protein RMD5 homolog A isoform X1 [Micr... [more]
gi|755926927|ref|XP_011302505.1|2.439e-6132.56PREDICTED: protein RMD5 homolog A isoform X1 [Fopi... [more]
gi|936695639|ref|XP_014225799.1|2.599e-6134.32PREDICTED: protein RMD5 homolog A isoform X1 [Tric... [more]
gi|749731036|ref|XP_011149860.1|4.064e-6136.15PREDICTED: protein RMD5 homolog A isoform X1 [Harp... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6454rna6454Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications