EWM24216.1, cds6414 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM24216.1
Unique Name	cds6414
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002468.1:495733..498300 -

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM24216.1
Product	beta-adaptin-like protein a
Orig transcript id	gnl\|cribi\|Naga_100020g48.5349.mrna
Gene	CPC20
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002468.1	supercontig	CM002468.1:495733..498300 -

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Biological Process**
Term	Definition
GO:0009987	cellular process
GO:0006810	transport
GO:0016192	vesicle-mediated transport
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0005737	cytoplasm
GO:0030117	membrane coat
GO:0030131	clathrin adaptor complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR026739	AP_beta
IPR011989	ARM-like
IPR002553	Clathrin/coatomer_adapt-like_N
IPR015151	B-adaptin_app_sub_C

Homology

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|585105607|gb|EWM24216.1| (beta-adaptin-like protein a [Nannochloropsis gaditana])

HSP 1 Score: 1754.96 bits (4544), Expect = 0.000e+0
Identity = 855/855 (100.00%), Postives = 855/855 (100.00%), Query Frame = 0

Query:    1 MTMSAPLPQSRQSHPSPLPGQHQQQNPPAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAFRLPSAAGMVLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLKIGRPEMESEGDDGKDRSANAVVELITQVLSSLHLL 855
            MTMSAPLPQSRQSHPSPLPGQHQQQNPPAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAFRLPSAAGMVLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLKIGRPEMESEGDDGKDRSANAVVELITQVLSSLHLL
Sbjct:    1 MTMSAPLPQSRQSHPSPLPGQHQQQNPPAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAFRLPSAAGMVLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLKIGRPEMESEGDDGKDRSANAVVELITQVLSSLHLL 855

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|299116733|emb|CBN76291.1| (Coatomer protein complex, beta sub-unit [Ectocarpus siliculosus])

HSP 1 Score: 767.303 bits (1980), Expect = 0.000e+0
Identity = 404/819 (49.33%), Postives = 534/819 (65.20%), Query Frame = 0

Query:   13 SHPSPLPGQH---QQQNPP--AYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAFRLPSAAGMVLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMG-VQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLKIGRPE 825
            + P   P Q     Q NP   +YFVD KKGE++ELKQLL+ ++V++DPK+KR+VIKKVIAYMTLGIDVSRLFTEM+LAIET DLVVKKMVYLYLC YA  KPDLA+MC+NTLQRDC+  DPMVRGLALR+LCSLRLP+M+EYIS PL+ +LTD + YVRKTGVM ILK++HL P        VD LYNM+QD D  VV NC++VL E++A + GGMA N  ++ HLLGRL +FNEWG+  ILALV+++ PADE+E F IMNL+DPVLRTSNSG VL+ + CFL LT  +PD++ QVY R KAPLLTLMAGG+ E  YCILKHLE M+ R PGVFDDEYRQ + RYNEPT VKY K+  LA++A+  T   ++AEL EY+ D+D  ++R+++RA+G I  RLP +A   +ERL+  + +D++ ++ E + V+  +LR+YP+ + E LP LQ C++ +D  P  +AA+IWM GEYG +   E PY+LEPL+D++    S+ +K+ LLTAA+KLFFKRPPEMQSMLGRLLA A NDL+SQD+HDRALLY+RLL  D E A+RV   E      R  + G FAE+RD T  RD +F EFNTL+++Y   S  F  P +R K  +   T  + G  +  D  + G  L    AD   L    V       +P+  G     G  A    ++  +D+  +              S +        +       +    FQ LWA L   +  + +++ +P      +E  L +RG+  +ASG      K F Y +  LG  YL+Q  + K  + L L +K   P+
Sbjct:   10 NQPQRGPAQQPPPSQSNPTGGSYFVDQKKGEINELKQLLRAVSVDRDPKKKREVIKKVIAYMTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDTDAQVVANCVVVLNEIMA-DAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSRHEPADEDEAFEIMNLVDPVLRTSNSGAVLAAVNCFLLLTKNMPDMRYQVYERTKAPLLTLMAGGSSETVYCILKHLEGMLPRCPGVFDDEYRQFFTRYNEPTGVKYAKVRCLALLADSTTAEAVIAELGEYAGDMDPLLARQAMRAVGKICLRLPGSAAAAIERLIDLMGMDVSYVKAEAVQVVEVLLRKYPQWRTEVLPSLQRCLKHID-EPAGKAAVIWMVGEYGDE-ITEAPYMLEPLVDAWEEEPSSQIKMHLLTAAVKLFFKRPPEMQSMLGRLLARAVNDLSSQDLHDRALLYHRLLKHDPEVARRVCCCE------RPPVSGEFAEDRD-TGRRDVVFSEFNTLSMVYDDHSDNFTLPEFRAKKVKN--TRAIPGEAEANDLADLGLALERSKADQQQLYDAAV------TAPAGGGGGTSGGDVAPPAAAAPEVDLLGLMGGDENGGGWGGGGSQAAPTAAGGGVEFQTGITINSGQFQSLWAALGAGVESSFEMSKVPA-STQEVEGLLTARGVNTMASGNKPAAMKFFFYAKDVLGSTYLMQCSVLKPERLLELVVKSDAPD 809

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|566024788|gb|ETI47699.1| (hypothetical protein F443_08132 [Phytophthora parasitica P1569])

HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0
Identity = 383/825 (46.42%), Postives = 516/825 (62.55%), Query Frame = 0

Query:   28 PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G ++  P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:   42 PNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQVADQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDNTPPPQQQQRNAAPPPQPVAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 821

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|570328469|gb|ETO76417.1| (hypothetical protein F444_08184 [Phytophthora parasitica P1976])

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 383/825 (46.42%), Postives = 516/825 (62.55%), Query Frame = 0

Query:   28 PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G ++  P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:   42 PNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQVAEQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDNTPPPQQQQRNAAPPPQPVAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 821

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|675191991|ref|XP_008904880.1| (hypothetical protein PPTG_11336 [Phytophthora parasitica INRA-310] >gi|568094964|gb|ETN09734.1| hypothetical protein PPTG_11336 [Phytophthora parasitica INRA-310])

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 383/825 (46.42%), Postives = 516/825 (62.55%), Query Frame = 0

Query:   28 PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G ++  P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:   38 PNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDNTPPPQQQQRNAAPPPQPAAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 817

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|568050511|gb|ETM47448.1| (hypothetical protein L914_07843 [Phytophthora parasitica] >gi|570952245|gb|ETP17502.1| hypothetical protein F441_08106 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 383/825 (46.42%), Postives = 516/825 (62.55%), Query Frame = 0

Query:   28 PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G ++  P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:   38 PNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDNTPPPQQQQRNAAPPPQPVAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 817

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|567962102|gb|ETK87632.1| (hypothetical protein L915_07959 [Phytophthora parasitica] >gi|568020077|gb|ETL94214.1| hypothetical protein L917_07777 [Phytophthora parasitica] >gi|570986552|gb|ETP45538.1| hypothetical protein F442_08068 [Phytophthora parasitica P10297] >gi|970627988|gb|KUF75757.1| Beta-adaptin protein A [Phytophthora nicotianae])

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 383/825 (46.42%), Postives = 516/825 (62.55%), Query Frame = 0

Query:   28 PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G ++  P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:   38 PNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDNTPPPQQQQRNAAPPPQPAAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 817

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|970660047|gb|KUF97634.1| (hypothetical protein AM588_10006768 [Phytophthora nicotianae])

HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0
Identity = 390/850 (45.88%), Postives = 525/850 (61.76%), Query Frame = 0

Query:    8 PQSRQSHPSPLPGQHQQQNP-----PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P S + H +P  G    Q P     P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G ++  P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:    7 PSSTRWHAAPPGGAPGAQRPAGSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDNTPPPQQQQRNAAPPPQPAAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 811

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|567990834|gb|ETL41056.1| (hypothetical protein L916_07884 [Phytophthora parasitica])

HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0
Identity = 383/825 (46.42%), Postives = 515/825 (62.42%), Query Frame = 0

Query:   28 PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTT--AVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            P YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++A +EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT    +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +++ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+G ++    PY+LE LID +   ++  V L LL A MKLFFKRPPE+QSMLGRLL +A N+ + QDV DRALLYYRLL          ++ +   +     IV  FAE  + T L+DKLF EFN+LAV+Y KPS  FVSP++       ++ P        +                       + G +   P +    N         PS DLLDM D G + + P      P A+      S+ AL+ S  M+  TFQ  W   P      V L  LP    S LE +  SRGI  +ASG+V   +K F Y Q   GR +L + ++ K ++ L  T+K
Sbjct:   38 PNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMA-DEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLVEQMQDHIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEFG-QDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTE----EIVSVFAESVE-TDLKDKLFQEFNSLAVVYNKPSELFVSPTH----LAGAVAPLDDEDDAEEEE--------------------ADEGYDHTPPPQQQQRNAAPPPQPAAPSMDLLDM-DFGSASSGPP-----PQAA-----GSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQ--SELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK 817

[Close]

BLAST of EWM24216.1 vs. NCBI_GenBank
Match: gi|953497637|emb|CEG41124.1| (ap-1 complex subunit [Plasmopara halstedii])

HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0
Identity = 395/854 (46.25%), Postives = 514/854 (60.19%), Query Frame = 0

Query:   10 SRQSHPSPLPGQ------HQQQNP-----PAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTTA--VPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAF-----------------RLPSAAGM-------------VLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLK 820
            S  SH  PLPG          Q P     P+YF D KKGEV+ELK LL+ + VEKD KRKR++IKKVIAYMTLGIDVSRLF+EMVL ++T DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ +LTD S YVRKTGV+GILK++ L P++ + ++ +D LYNMI+D DP VV+NCL+ L E++ A+EGG+A+NQP+++HLL R+ +FNEWG   IL +VAKY P   +E+FTIMN L+  LR SNS VVL T KCF +LT A  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KIDILA++A+   V DIV EL+EY TDVDQE++RR+IRAI +IA                   +P A G              +L+ +V FL++D++ +R E+++VM+D+LR+YP+++ + LP L   +  V   P A+AA++WM GE+ G++    PY+LE LID +   +S+ V L LL A MKLFFKRPPEMQSMLGRLL +A N+   QDV DRALLYYRLL          ++ +  ++      V  FAE  + T L DKLF EFN+LAV+Y KPS  FVSP++   PA     P                      DD            E E  S                S DLLDM     S   P    T             L LI S  M+  TFQ  W   P      V L  LP    + LE +  SRGI  +ASG+V   +K F Y Q   GR YL + ++ K ++    T+K
Sbjct:    4 SYPSHGPPLPGSMVPPPPAGAQRPGGNSNPSYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRITDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQARGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVTKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLLKNTIPQQYPGGGNVPEAYGQHAAERLVEQMQDHILDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLCRIISAV-GQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEASSSVILELLAAVMKLFFKRPPEMQSMLGRLLGSAINESNHQDVRDRALLYYRLLEQQPTDQAAAIVAQFRLE----ETVSVFAESIE-TDLMDKLFQEFNSLAVVYNKPSELFVSPTHLAGPA----APL---------------------DDE----------AEREEAS----------------SMDLLDMDFSSTSNGPPKPPTT-------------LTLIPSPVMDAATFQGQWGSRPIVAEVVVQLPTLPPQ--NELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRYYLSETLVEKANRTFRATIK 783

The following BLAST results are available for this feature:

BLAST of EWM24216.1 vs. NCBI_GenBank

BLAST of EWM24216.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585105607\|gb\|EWM24216.1\|	0.000e+0	100.00	beta-adaptin-like protein a [Nannochloropsis gadit...	[more]
gi\|299116733\|emb\|CBN76291.1\|	0.000e+0	49.33	Coatomer protein complex, beta sub-unit [Ectocarpu...	[more]
gi\|566024788\|gb\|ETI47699.1\|	0.000e+0	46.42	hypothetical protein F443_08132 [Phytophthora para...	[more]
gi\|570328469\|gb\|ETO76417.1\|	0.000e+0	46.42	hypothetical protein F444_08184 [Phytophthora para...	[more]
gi\|675191991\|ref\|XP_008904880.1\|	0.000e+0	46.42	hypothetical protein PPTG_11336 [Phytophthora para...	[more]
gi\|568050511\|gb\|ETM47448.1\|	0.000e+0	46.42	hypothetical protein L914_07843 [Phytophthora para...	[more]
gi\|567962102\|gb\|ETK87632.1\|	0.000e+0	46.42	hypothetical protein L915_07959 [Phytophthora para...	[more]
gi\|970660047\|gb\|KUF97634.1\|	0.000e+0	45.88	hypothetical protein AM588_10006768 [Phytophthora ...	[more]
gi\|567990834\|gb\|ETL41056.1\|	0.000e+0	46.42	hypothetical protein L916_07884 [Phytophthora para...	[more]
gi\|953497637\|emb\|CEG41124.1\|	0.000e+0	46.25	ap-1 complex subunit [Plasmopara halstedii]	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna6430	rna6430	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications