EWM24286.1, cds6406 (CDS) Nannochloropsis gaditana

Overview
NameEWM24286.1
Unique Namecds6406
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:479858..480094 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24286.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100020g59.5419.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:479858..480094 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24286.1 vs. NCBI_GenBank
Match: gi|585105677|gb|EWM24286.1| (hypothetical protein Naga_100020g59 [Nannochloropsis gaditana])

HSP 1 Score: 165.236 bits (417), Expect = 7.842e-52
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 
Query:    1 MYFHIDEIITNQAMLRYSTVMGKVLKKSTYFFHREGIPTAREGHKCMSEGNLHRSNNINLTLWLFTRQVHMITSVIMR 78
            MYFHIDEIITNQAMLRYSTVMGKVLKKSTYFFHREGIPTAREGHKCMSEGNLHRSNNINLTLWLFTRQVHMITSVIMR
Sbjct:    1 MYFHIDEIITNQAMLRYSTVMGKVLKKSTYFFHREGIPTAREGHKCMSEGNLHRSNNINLTLWLFTRQVHMITSVIMR 78
The following BLAST results are available for this feature:
BLAST of EWM24286.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105677|gb|EWM24286.1|7.842e-52100.00hypothetical protein Naga_100020g59 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6422rna6422Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications