EWM24235.1, cds6400 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|585105626|gb|EWM24235.1| (urease accessory protein ureg [Nannochloropsis gaditana]) HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0 Query: 1 MSSTPHSKHVSTEGREKVSTARHPEKDNGHHHQHEHHHSTSRGDEHCDAHNKVVEDQRKHIHDHDYHHHHHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLKRDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIRPKKTSGIRDVAEKSS 344 MSSTPHSKHVSTEGREKVSTARHPEKDNGHHHQHEHHHSTSRGDEHCDAHNKVVEDQRKHIHDHDYHHHHHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLKRDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIRPKKTSGIRDVAEKSS Sbjct: 1 MSSTPHSKHVSTEGREKVSTARHPEKDNGHHHQHEHHHSTSRGDEHCDAHNKVVEDQRKHIHDHDYHHHHHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLKRDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIRPKKTSGIRDVAEKSS 344
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|585105627|gb|EWM24236.1| (urease accessory protein ureg [Nannochloropsis gaditana]) HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0 Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0 Query: 28 NGHHHQHEHHHSTSRGDEHCDAHNKVVEDQRKHIHDHDYHHHHHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLKRDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIRPKKTSGIRDVAEKSS 344 GHHHQHEHHHSTSRGDEHCDAHNKVVEDQRKHIHDHDYHHHHHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLKRDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIRPKKTSGIRDVAEKSS Sbjct: 5 QGHHHQHEHHHSTSRGDEHCDAHNKVVEDQRKHIHDHDYHHHHHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLKRDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIRPKKTSGIRDVAEKSS 321
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|953487802|emb|CEG48630.1| (urease accessory protein [Plasmopara halstedii]) HSP 1 Score: 337.421 bits (864), Expect = 1.555e-112 Identity = 166/254 (65.35%), Postives = 199/254 (78.35%), Query Frame = 0 Query: 70 HHHHYHDNSMSAQQKGDHLPSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 +H H D + + P+ ++ EHGHTHE +E G FH RD RD+++RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+ED EFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + + ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINKTDLA VGADL+ MAR+A +MRGDGP V +Q+ D GVQDII H++K WK Sbjct: 20 NHSHIDDLIQNFTRSHGRAPTLDEENHLREHGHTHEHLEHAGIFHERDTAKSDRDWVQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDSEFLVRHDALPKERIRAIETGGCPHAAIREDISANLQACEDLTEEFHPQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKTDLAPHVGADLDVMARDAKLMRGDGPTVFSQINQDKGVQDIIEHMIKTWK 273
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|568036057|gb|ETM33674.1| (urease accessory protein UreG [Phytophthora parasitica]) HSP 1 Score: 331.257 bits (848), Expect = 4.899e-110 Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 0 Query: 89 PSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 P+ EHGHTHE ME G FH RD RD+ +RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+EDGEFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + +A ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGADL+ M R+A +MRG+GP V +Q+ GVQDI+ H++ WK Sbjct: 47 PTTDEEKQLREHGHTHEHMEHAGVFHERDAAKSGRDWTQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDGEFLVRHDALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGADLDVMDRDAKLMRGEGPTVFSQINQGKGVQDIVDHVIGTWK 281
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|568006192|gb|ETL80462.1| (urease accessory protein UreG [Phytophthora parasitica]) HSP 1 Score: 331.257 bits (848), Expect = 4.913e-110 Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 0 Query: 89 PSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 P+ EHGHTHE ME G FH RD RD+ +RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+EDGEFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + +A ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGADL+ M R+A +MRG+GP V +Q+ GVQDI+ H++ WK Sbjct: 49 PTTDEEKQLREHGHTHEHMEHAGVFHERDAAKSGRDWTQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDGEFLVRHDALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGADLDVMDRDAKLMRGEGPTVFSQINQGKGVQDIVDHVIGTWK 283
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|567976698|gb|ETL27215.1| (urease accessory protein UreG [Phytophthora parasitica] >gi|570938040|gb|ETP03297.1| urease accessory protein UreG [Phytophthora parasitica CJ01A1]) HSP 1 Score: 330.487 bits (846), Expect = 1.146e-109 Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 0 Query: 89 PSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 P+ EHGHTHE ME G FH RD RD+ +RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+EDGEFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + +A ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGADL+ M R+A +MRG+GP V +Q+ GVQDI+ H++ WK Sbjct: 54 PTTDEEKQLREHGHTHEHMEHAGVFHERDAAKSGRDWTQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDGEFLVRHDALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGADLDVMDRDAKLMRGEGPTVFSQINQGKGVQDIVDHVIGTWK 288
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|570968337|gb|ETP31456.1| (urease accessory protein UreG [Phytophthora parasitica P10297]) HSP 1 Score: 330.102 bits (845), Expect = 1.385e-109 Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 0 Query: 89 PSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 P+ EHGHTHE ME G FH RD RD+ +RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+EDGEFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + +A ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGADL+ M R+A +MRG+GP V +Q+ GVQDI+ H++ WK Sbjct: 49 PTPDEEKQLREHGHTHEHMEHAGVFHERDADKSGRDWTQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDGEFLVRHDALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGADLDVMDRDAKLMRGEGPTVFSQINQGKGVQDIVDHVIGTWK 283
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|970639311|gb|KUF82424.1| (Urease accessory protein UreG [Phytophthora nicotianae] >gi|970647570|gb|KUF87359.1| Integrator complex subunit 9 [Phytophthora nicotianae]) HSP 1 Score: 330.102 bits (845), Expect = 1.453e-109 Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 0 Query: 89 PSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 P+ EHGHTHE ME G FH RD RD+ +RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+EDGEFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + +A ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGADL+ M R+A +MRG+GP V +Q+ GVQDI+ H++ WK Sbjct: 52 PTPDEEKQLREHGHTHEHMEHAGVFHERDAAKSGRDWTQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDGEFLVRHDALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGADLDVMDRDAKLMRGEGPTVFSQINQGKGVQDIVDHVIGTWK 286
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|566010543|gb|ETI33454.1| (urease accessory protein UreG [Phytophthora parasitica P1569]) HSP 1 Score: 330.102 bits (845), Expect = 2.953e-109 Identity = 160/235 (68.09%), Postives = 188/235 (80.00%), Query Frame = 0 Query: 89 PSKRHSHNYDEHGHTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWK 322 P+ EHGHTHE ME G FH RD RD+ +RAFTVG+GGPVGSGKTAL+ ALC+AL+ +S+AA+TNDIFT+EDGEFL+RH AL +RI AIETGGCPHAAIREDISANL CE +T + +A ++LVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGADL+ M R+A +MRG+GP V +Q+ GVQDI+ H++ WK Sbjct: 71 PTTDEEKQLREHGHTHEHMEHAGVFHERDAAKSGRDWTQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDGEFLVRHDALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGADLDVMDRDAKLMRGEGPTVFSQINQGKGVQDIVDHVIGTWK 305
BLAST of EWM24235.1 vs. NCBI_GenBank
Match: gi|470114702|ref|XP_004293549.1| (PREDICTED: urease accessory protein G [Fragaria vesca subsp. vesca]) HSP 1 Score: 327.405 bits (838), Expect = 1.112e-108 Identity = 158/229 (69.00%), Postives = 190/229 (82.97%), Query Frame = 0 Query: 102 HTHEPMESPGAFHTRDQPLK-RDYLERAFTVGVGGPVGSGKTALLYALCKALRHDYSIAAITNDIFTQEDGEFLLRHSALEPDRILAIETGGCPHAAIREDISANLAGCEGMTGKHNADIILVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLADSVGADLERMAREAAVMRGDGPVVMAQVKFDIGVQDIIAHILKAWKLATGVIR 329 H+HEP+ SPG F R PL+ RD+ ERAFT+G+GGPVG+GKTAL+ ALCK LR YS+AA+TNDIFT+EDGEFL++H AL +RI A+ETGGCPHAAIREDIS NL E ++ + ADI+L ESGGDNLAANFSRELADYIIY+IDV+GGDK+PRKGGPGITQ+DLLVINKTDLA++VGADL M R+A MR GP V AQVK GV++I+ HIL+AW+LATG+ R Sbjct: 49 HSHEPIYSPGFFSRRAPPLQTRDFKERAFTIGIGGPVGTGKTALMLALCKLLRDKYSLAAVTNDIFTKEDGEFLVKHGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYKADILLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAEAVGADLAVMERDALRMRDGGPFVFAQVKHGKGVEEIVHHILQAWELATGMKR 277 The following BLAST results are available for this feature:
BLAST of EWM24235.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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