EWM24232.1, cds6387 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|585105623|gb|EWM24232.1| (hypothetical protein Naga_100020g79 [Nannochloropsis gaditana]) HSP 1 Score: 2225.28 bits (5765), Expect = 0.000e+0 Identity = 1077/1077 (100.00%), Postives = 1077/1077 (100.00%), Query Frame = 0 Query: 1 MYIILKFLRGTAVRKVSLMDFKQSCDAMASAHGTSGANVMLLSGGMGDGKAFREASCPCPPFQHSSPTTKLYQNQGGRGEQTMPVTHLHVLPPRVQKVSILSNNFPQLQPKAGSYCCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFEVLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSPEEAALASRSLQLEWRLQFLHLGKQVGVRVSNLYEWDAFLKTVVPAAPKAVGGAGGPQALSGRKPEGNAEDDTTSPPTFSRKRRTIGPTVAQCPDNHLQRVRGARQASAEQDGALPPSSLATRGLGVLMLRLAADKHRNFTVQNGVMAATSIEDLLLLLRQAPGDECSVLARAGNGAVLFVSVGIKGLLGWGDADLVGTPLIDAKSRGGCATGSGFQGRLGRNQNGVIHGEDGSVLQAAVRQSQVHTASVLERLGNPQLPVQEHDLMMVPLVLRLYRRDRTLVRRQLTVFATEDFLLLHGSLAAPTPPVHRAQGRRRENVHRPTKQCGYQEGFYLSQHEGQHTDDYQPYQQQQQQQYHEEHQGQQEKQEPQGPQQWRHPHDVGHVETRQGKERNDFSGHLSKSSLTLSLRNLALAPSHQYPRVYRNTSFTSTLPLCRASVERMQASSLSTNYVQPAHLSYEQVVHEEGGALPLPESIIGSRGPQAHSITTSEHESSVPIAEGGHDMNSCILHGAALLGRRSEVAPTLVLESNMDVEARVEGAIERLEKWGSQLSEEGYNIATSADDTIVPRKGESGLAEAEVIEWATDEDVRLALGEHAREPTPQMQRDACGGAYDLCYSPPSTFEETMRAFLLGLPAQCFQSADIWVPFRDPRTKRLSLQFGSGLALRGDLSQWIYYSRNFAFFEGQGMPGRVFRSQVPEYLENIASIDAKLFLRRDGAQVAGVHSSFGVPLVQDDSVIVLVFYSNHDSSSHITQELLDFVRRATASWKIQTTFPVPKALTADPDHQPAVVRSALLR 1077 MYIILKFLRGTAVRKVSLMDFKQSCDAMASAHGTSGANVMLLSGGMGDGKAFREASCPCPPFQHSSPTTKLYQNQGGRGEQTMPVTHLHVLPPRVQKVSILSNNFPQLQPKAGSYCCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFEVLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSPEEAALASRSLQLEWRLQFLHLGKQVGVRVSNLYEWDAFLKTVVPAAPKAVGGAGGPQALSGRKPEGNAEDDTTSPPTFSRKRRTIGPTVAQCPDNHLQRVRGARQASAEQDGALPPSSLATRGLGVLMLRLAADKHRNFTVQNGVMAATSIEDLLLLLRQAPGDECSVLARAGNGAVLFVSVGIKGLLGWGDADLVGTPLIDAKSRGGCATGSGFQGRLGRNQNGVIHGEDGSVLQAAVRQSQVHTASVLERLGNPQLPVQEHDLMMVPLVLRLYRRDRTLVRRQLTVFATEDFLLLHGSLAAPTPPVHRAQGRRRENVHRPTKQCGYQEGFYLSQHEGQHTDDYQPYQQQQQQQYHEEHQGQQEKQEPQGPQQWRHPHDVGHVETRQGKERNDFSGHLSKSSLTLSLRNLALAPSHQYPRVYRNTSFTSTLPLCRASVERMQASSLSTNYVQPAHLSYEQVVHEEGGALPLPESIIGSRGPQAHSITTSEHESSVPIAEGGHDMNSCILHGAALLGRRSEVAPTLVLESNMDVEARVEGAIERLEKWGSQLSEEGYNIATSADDTIVPRKGESGLAEAEVIEWATDEDVRLALGEHAREPTPQMQRDACGGAYDLCYSPPSTFEETMRAFLLGLPAQCFQSADIWVPFRDPRTKRLSLQFGSGLALRGDLSQWIYYSRNFAFFEGQGMPGRVFRSQVPEYLENIASIDAKLFLRRDGAQVAGVHSSFGVPLVQDDSVIVLVFYSNHDSSSHITQELLDFVRRATASWKIQTTFPVPKALTADPDHQPAVVRSALLR Sbjct: 1 MYIILKFLRGTAVRKVSLMDFKQSCDAMASAHGTSGANVMLLSGGMGDGKAFREASCPCPPFQHSSPTTKLYQNQGGRGEQTMPVTHLHVLPPRVQKVSILSNNFPQLQPKAGSYCCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFEVLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSPEEAALASRSLQLEWRLQFLHLGKQVGVRVSNLYEWDAFLKTVVPAAPKAVGGAGGPQALSGRKPEGNAEDDTTSPPTFSRKRRTIGPTVAQCPDNHLQRVRGARQASAEQDGALPPSSLATRGLGVLMLRLAADKHRNFTVQNGVMAATSIEDLLLLLRQAPGDECSVLARAGNGAVLFVSVGIKGLLGWGDADLVGTPLIDAKSRGGCATGSGFQGRLGRNQNGVIHGEDGSVLQAAVRQSQVHTASVLERLGNPQLPVQEHDLMMVPLVLRLYRRDRTLVRRQLTVFATEDFLLLHGSLAAPTPPVHRAQGRRRENVHRPTKQCGYQEGFYLSQHEGQHTDDYQPYQQQQQQQYHEEHQGQQEKQEPQGPQQWRHPHDVGHVETRQGKERNDFSGHLSKSSLTLSLRNLALAPSHQYPRVYRNTSFTSTLPLCRASVERMQASSLSTNYVQPAHLSYEQVVHEEGGALPLPESIIGSRGPQAHSITTSEHESSVPIAEGGHDMNSCILHGAALLGRRSEVAPTLVLESNMDVEARVEGAIERLEKWGSQLSEEGYNIATSADDTIVPRKGESGLAEAEVIEWATDEDVRLALGEHAREPTPQMQRDACGGAYDLCYSPPSTFEETMRAFLLGLPAQCFQSADIWVPFRDPRTKRLSLQFGSGLALRGDLSQWIYYSRNFAFFEGQGMPGRVFRSQVPEYLENIASIDAKLFLRRDGAQVAGVHSSFGVPLVQDDSVIVLVFYSNHDSSSHITQELLDFVRRATASWKIQTTFPVPKALTADPDHQPAVVRSALLR 1077
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|299470683|emb|CBN78623.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.88 bits (333), Expect = 5.769e-28 Identity = 78/239 (32.64%), Postives = 122/239 (51.05%), Query Frame = 0 Query: 114 SYCCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMD-GKEMAFEVLLPEPYTRNGATLSLSHQELS------KKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSPEEAALA-----SRSLQLEWRLQFLHLGKQVGVRVSNLYEWD-----AFLKTVVPAAPKAVGGAGG 335 + C C RAD+R C + H RC+Y P+ RCP C MD G + +L EPY+ AT E + R GRW E +A+ ++ F +G +PL +G++LG FLC++L C+ +RLS KL+ GK+ F+ + E I ++ + Q++LS EE+FL S +A S +Q EWR +F+ V ++ N ++W+ A L + + +A GG G Sbjct: 78 AVCDLCNVRRADLRGPCGHKY-HARCIYSMPIVRCPVCDMDFGNDDGLFILPVEPYS---ATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSKGQAAGGVQG 312 HSP 2 Score: 96.2857 bits (238), Expect = 1.383e-16 Identity = 52/153 (33.99%), Postives = 84/153 (54.90%), Query Frame = 0 Query: 904 FEETMRAFLLGLPAQCFQSADIWVPF--RDPRTKRLSLQFGSGLALRGDLSQWIYYSRNFAFFEGQGMPGRVFRSQVPEYLENIASIDAKLFLRRDGAQVAGVHSSFGVPLVQDDSV-IVLVFYSNHDSSSHITQELLDFVRRATASWKIQTT 1053 FE+ + FL +P F++ D+WVP +D + L +L +W YS NF+F +GQG+PGRV+ + E+ EN+ +++ FLR +GA G+ +SFGVP+V V V+VFYS + + ++ F+ R ++WK T Sbjct: 622 FEDFIGNFLDQIP---FEAVDVWVPLCNQDQEGSEVVLFHAGYFTNVKELEEWGDYSTNFSFRQGQGLPGRVYANNKSEWQENVVNLNHAHFLRLNGAMNIGIRTSFGVPVVSRWGVTFVIVFYSR--VAVQMDADMKAFIERTVSAWKFDAT 769
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|299472186|emb|CBN79689.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 127.102 bits (318), Expect = 6.127e-28 Identity = 72/224 (32.14%), Postives = 115/224 (51.34%), Query Frame = 0 Query: 114 SYCCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSM---DGKEMAFEVLLPEPYTRNGATLSLSHQEL---------SKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSPEEAALA-----SRSLQLEWRLQFLHLGKQVGVRVSNLYEWDAFLK 320 S C C RAD+R C + H RC+Y P+TRCP C + + +L EP++ G S + ++ R GRW E +A+ ++ F +G LPL +G++LG LC++L C+ +RLS KL+ GK+ F+ D ++ E I R+ + Q++LS EE+FL S +A S +Q EWR + + V R+ N ++W++ K Sbjct: 33 SVCDLCNMRRADLRGPCGHKY-HARCIYAMPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEMFLMAESRANRGMANAETLSECIQKEWRERLVEHALAVNQRLKNAWDWNSSRK 255
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|299472187|emb|CBN79690.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.4261 bits (215), Expect = 8.777e-15 Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 0 Query: 904 FEETMRAFLLGLPAQCFQSADIWVPF--RDPRTKRLSLQFGSGLALRGDLSQWIYYSRNFAFFEGQGMPGRVFRSQVPEYLENIASIDAKLFLRRDGAQVAGVHSSFGVPLVQDDSV-IVLVFYS 1025 FE + FL +P F++ D+WVP RD + L +L +W YS NF+F +GQG+PGRVF S E+ EN+ ++D +FLR +GA+ G+ +SF +P+V V V+VFY+ Sbjct: 181 FEHFIANFLDQVP---FEAVDVWVPLCDRDQEGSDVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYT 302
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|219129985|ref|XP_002185156.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403335|gb|EEC43288.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.1149 bits (209), Expect = 4.246e-13 Identity = 62/228 (27.19%), Postives = 100/228 (43.86%), Query Frame = 0 Query: 105 FPQLQPKAGSY--CCKCGCPRADVRLTCCNSVVHGRCVYPWP---VTRCPSCS---------------MDGKEMAFEVLLPEPYTR-----NGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSP-EEAALASRSLQLEWRLQFLHLGKQVG 306 F L+ Y C C DVR++ C H RC+ P ++ CP C+ +D L P+P R GA L ++++R GRW+ E +F + +M+ F +G LP+ DG +L FL ++L+ +RL+ K++ K + + +GI + + + S EELF + +E A +Q EWR QF + VG Sbjct: 19 FGSLEMDGDEYVRCMLCHSAGVDVRVSSCGCTSHARCIQLNPHGSLSNCPFCTKPTQGLVLFPMSFREIDEAHRTASALPPKPQNRGRKRKTGADLIEDKGYVAERRTGRWTNEEMSFCDKLMDKFANGDLPVADGVKLNEFLGNMLKSKQSRLTKKMKNAKLSSK-TYQKGIGCLTA----TDASEFSDLEELFFQAIPDLQERAEIKFHMQKEWREQFSRVCATVG 241
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|1214712949|gb|OWZ23864.1| (hypothetical protein PHMEG_0001189 [Phytophthora megakarya]) HSP 1 Score: 82.8037 bits (203), Expect = 1.700e-12 Identity = 63/228 (27.63%), Postives = 98/228 (42.98%), Query Frame = 0 Query: 116 CCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFE-----VLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRT---GKRNFRYLVDEGISAESIFRYEQ-----EQRQLSRREELFLHYL---------SPEEAALASRSLQLE----WRLQFLHLGKQVGVRVSNLYEWDA 317 C C P + CN + H RCV+ WP+ CP+C+ ++A ++ PEP R G+W+ E F + ++ F LPL G+ + L +L C++ RLS K + GKR FR V + E ++EQ QR+LSR E++F L + E A + +++L+L W FL +G + L DA Sbjct: 128 CDVCQYPDPVLVAPNCNHIFHSRCVHVWPLDACPACAAPLDQVAISPTINMMVRPEP------------------RSGKWTRPEEKFIDGILCEFDRQALPLAHGTPIRLVLAKMLNCSTMRLSKKFQKNALGKRTFR--VTKPGKGEKAVQFEQMDHGRRQRELSRLEQIFRQELVDQFRRENNTDEGALVETQNLRLAVQQFWVSNFLKFAVLIGQPIMGLDVSDA 335
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|219115151|ref|XP_002178371.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410106|gb|EEC50036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 82.8037 bits (203), Expect = 2.464e-12 Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 181 ELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGK---RNFRYLVDEGISAESIFRYEQEQRQLSRREELFLHYLSPEEAALASR-SLQLEWRLQFLHLGKQVGVRVSNLYEWDAFLKTVVPAAPKA 329 E S +R GRW++ E A + +M+ F G LP +G RL FL LL C ++RL+ K++ K R++ + VD+GI+ + + + LS E FL +S E L R ++ WR F +L QVG + N +W + L+T+ A +A Sbjct: 199 EHSYQRTGRWTDEETALTDFLMDAFDKGRLPTPEGIRLNDFLSGLLLCKNSRLTKKMKNAKLSVRSYEFSVDKGIN------FCIDFQMLSSLESKFLESVSSEPTRLELRFNMTKMWRSHFSNLCLQVGSTLLNASDWISSLETMECRAAQA 345
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|970663505|gb|KUG00666.1| (hypothetical protein AM587_10013527 [Phytophthora nicotianae]) HSP 1 Score: 80.4925 bits (197), Expect = 7.414e-12 Identity = 62/228 (27.19%), Postives = 95/228 (41.67%), Query Frame = 0 Query: 116 CCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFE-----VLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRT---GKRNFRYLVDEGISAESIFRYEQ-----EQRQLSRREELFLHYL--------SPEEAALASR-----SLQLEWRLQFLHLGKQVGVRVSNLYEWDA 317 C C P + CN + H RCV+ WP+ CP+C+ ++A ++ PEP R G+W+ E F + ++ F LPL G+ + L +L C++ RLS K + GKR FR V + E +++Q QR+LS E++F L + +E AL ++Q W FL +G V L DA Sbjct: 112 CDVCQYPDPVLVAPNCNHLFHSRCVHVWPLDACPACAAPLDQVAISPTINMMMRPEP------------------RSGKWTRPEEKFIDGILREFDRQALPLAHGTPIRLVLAKMLNCSTMRLSKKFQKNALGKRTFR--VTKPGKGEKALQFDQMDHARRQRELSSLEQIFRQELVDQFRRENNTDEGALVETQHLRLAVQQFWVSNFLKFAVLIGQPVMGLDVSDA 319
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|675166055|ref|XP_008891912.1| (hypothetical protein PPTG_02540 [Phytophthora parasitica INRA-310] >gi|568108055|gb|ETN22679.1| hypothetical protein PPTG_02540 [Phytophthora parasitica INRA-310]) HSP 1 Score: 80.4925 bits (197), Expect = 9.426e-12 Identity = 62/228 (27.19%), Postives = 95/228 (41.67%), Query Frame = 0 Query: 116 CCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFE-----VLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRT---GKRNFRYLVDEGISAESIFRYEQ-----EQRQLSRREELFLHYL--------SPEEAALASR-----SLQLEWRLQFLHLGKQVGVRVSNLYEWDA 317 C C P + CN + H RCV+ WP+ CP+C+ ++A ++ PEP R G+W+ E F + ++ F LPL G+ + L +L C++ RLS K + GKR FR V + E +++Q QR+LS E++F L + +E AL ++Q W FL +G V L DA Sbjct: 130 CDVCQYPDPVLVAPNCNHLFHSRCVHVWPLDACPACAAPLDQVAISPTINMMMRPEP------------------RSGKWTRPEEKFIDGILREFDRQALPLAHGTPIRLVLAKMLNCSTMRLSKKFQKNALGKRTFR--VTKPGKGEKALQFDQMDHARRQRELSSLEQIFRQELVDQFRRENNTDEGALVETQHLRLAVQQFWVSNFLKFAVLIGQPVMGLDVSDA 337
BLAST of EWM24232.1 vs. NCBI_GenBank
Match: gi|568022319|gb|ETL96396.1| (hypothetical protein L917_06118, partial [Phytophthora parasitica]) HSP 1 Score: 80.4925 bits (197), Expect = 1.028e-11 Identity = 62/228 (27.19%), Postives = 95/228 (41.67%), Query Frame = 0 Query: 116 CCKCGCPRADVRLTCCNSVVHGRCVYPWPVTRCPSCSMDGKEMAFE-----VLLPEPYTRNGATLSLSHQELSKKRGGRWSEAECAFAELVMEGFGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRT---GKRNFRYLVDEGISAESIFRYEQ-----EQRQLSRREELFLHYL--------SPEEAALASR-----SLQLEWRLQFLHLGKQVGVRVSNLYEWDA 317 C C P + CN + H RCV+ WP+ CP+C+ ++A ++ PEP R G+W+ E F + ++ F LPL G+ + L +L C++ RLS K + GKR FR V + E +++Q QR+LS E++F L + +E AL ++Q W FL +G V L DA Sbjct: 170 CDVCQYPDPVLVAPNCNHLFHSRCVHVWPLDACPACAAPLDQVAISPTINMMMRPEP------------------RSGKWTRPEEKFIDGILREFDRQALPLAHGTPIRLVLAKMLNCSTMRLSKKFQKNALGKRTFR--VTKPGKGEKALQFDQMDHARRQRELSSLEQIFRQELVDQFRRENNTDEGALVETQHLRLAVQQFWVSNFLKFAVLIGQPVMGLDVSDA 377 The following BLAST results are available for this feature:
BLAST of EWM24232.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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