EWM24259.1, cds6386 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|585105650|gb|EWM24259.1| (gns1 sur4 family protein [Nannochloropsis gaditana]) HSP 1 Score: 907.516 bits (2344), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0 Query: 1 MIPLLPIALGGVLAAPFMGTLYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYDMCGVMKNDPAEAGLSTLSYVGSVRLGPDGSAVVCLPRHFREGLSSPLYVYHLTPVGSPMPNLYVSREVLWGSGISDGEINRKRGDRTSSEGVVLMEQVVQRAGGSYTFVVRGGRPKGLVSWTVCCVVGDEAIRQH 441 MIPLLPIALGGVLAAPFMGTLYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYDMCGVMKNDPAEAGLSTLSYVGSVRLGPDGSAVVCLPRHFREGLSSPLYVYHLTPVGSPMPNLYVSREVLWGSGISDGEINRKRGDRTSSEGVVLMEQVVQRAGGSYTFVVRGGRPKGLVSWTVCCVVGDEAIRQH Sbjct: 1 MIPLLPIALGGVLAAPFMGTLYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYDMCGVMKNDPAEAGLSTLSYVGSVRLGPDGSAVVCLPRHFREGLSSPLYVYHLTPVGSPMPNLYVSREVLWGSGISDGEINRKRGDRTSSEGVVLMEQVVQRAGGSYTFVVRGGRPKGLVSWTVCCVVGDEAIRQH 441
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|299115192|emb|CBN74023.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 318.931 bits (816), Expect = 2.152e-101 Identity = 192/438 (43.84%), Postives = 258/438 (58.90%), Query Frame = 0 Query: 21 LYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAP-LPQHANSHSPPFIATSFICNQLPLGHPG--LASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYD--MCGVMKNDPAEAG-------------------LSTLSYVGSVRLGPDGSAVVCLPRHF-REGLS-SPLYVYHLTPVGSPMPNLYVSREVLWGSGISDGEINRKRGDRTSSEGVVLMEQVVQRAGGSYTFVVRGGRPKGLVSWTVCCV 432 LY+R ++S +A Y+ R+A GLQP+T ++NL+ V +E LLV N YL L LY M RR++ +L+ ++ YN +NV +S +V+ S+L +K+ S N S F+CN L G +A VFAV+YLQKY E +DT+ F+LRRSFRQVTF HLFHH SITVIVGS++PFDF GDMY PI++NS+ HV VYLHY + LG + WWS HL LQ+ QFA I +QS AFY GP CGSPDF K+++++Y S+L LF+ FF KR +L PA D MCGV+K+ A++ + S+ G+V L G+A + LP F E L+ S Y Y LTPVG+PMP L+VS E+ + I+R RGD AG +F V+GG+P+ VSW V V Sbjct: 6 LYQRVSQSYEVALGQYQDRVAAGLQPSTRVVNLYSVGTEEGLLVCANFLYLGLVVLLYLRMLRRKEPVRLRALMLGYNTLNVCISLFVACSLLFFKVSSRGFNGEGRDGSVVSPGGGGGVGGFVCNPLRTDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSILPFDFNGDMYLPIMLNSIVHVLVYLHYVLSALGKHSWWSRHLTKLQLTQFAVILVQSATAFYRGPDCGSPDFVKVVLLLYMISLLGLFALFFVKRSLL-GPAEDPGMCGVIKSLEADSSGGIGGTAGKTEGVVAAPAAAAAGSWHGNVLLDEVGAAEIWLPPGFPAETLAGSTTYSYQLTPVGAPMPGLFVSEEIATATSRGSKPISRLRGDSND-------------AGSCISFSVKGGKPRFTVSWAVTAV 429
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|855312694|ref|XP_012897915.1| (uncharacterized protein [Blastocystis hominis] >gi|300122860|emb|CBK23867.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 153.295 bits (386), Expect = 6.230e-40 Identity = 91/235 (38.72%), Postives = 134/235 (57.02%), Query Frame = 0 Query: 67 NLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYK-LFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDF-GGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYI 299 N+ Y V L M RRE+ K+ + VYN I V +++Y +L+Y L SVL+ A+ + L VF V+Y+QKY+EFLDT+ FILR+S+RQVTFLH++HH+SIT++V L F + GD P+L+NS H+ +Y HY C+ LG WW ++L LQ+ QF I L +++ +G C P + L++ Y +M+VLFS F+ KRY+ Sbjct: 34 NIFYFVTIYVLMQIMNRREERFNPKKFMIVYNFICVCLATYCFYGMLRYYYLDGSVLSCSNIDFASEKAKQ-----------------LVRVFYVFYIQKYWEFLDTFIFILRKSYRQVTFLHVYHHSSITIMV-RLFLFAYPNGDNCVPVLLNSFVHMLMYTHYLCSILGFKCWWRSYLTKLQLVQFVLITLVNVVDLVKG-NCQMPHWLNWLLIAYMATMIVLFSRFYIKRYL 249
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|1032147805|gb|OAO12121.1| (GNS1/SUR4 family protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 153.295 bits (386), Expect = 8.398e-40 Identity = 86/245 (35.10%), Postives = 135/245 (55.10%), Query Frame = 0 Query: 75 CGLYAHMRRREKAHQL--KQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYDMCGVMKNDPAE 317 C ++ M+ EK + K+ + +YN I V +++Y ++KY + SP F ++ + +A VF ++Y+QKY+EF+DT+ FILR+S+RQVTFLH++HH+SITV+V + + GD P+L+NS H+ +Y HY C+ LG+ WW + L LQ+ QF I +++ +G C P + LM+ Y G+M+VLFS FF KRY+ + A P E Sbjct: 39 CTIFLLMKFMEKRERFNPKRFMIIYNAICVALATYCFVGMVKYYILKK-------------SPLFCSS---VDFFSEDAKHIAHVFYIFYVQKYWEFIDTFLFILRKSYRQVTFLHVYHHSSITVVVSLFLHYYPAGDNCIPVLLNSFIHMLMYSHYLCSILGVKCWWRSLLTLLQLVQFVLITAANVMDLVKGT-CQMPHWMNWLMIAYMGTMIVLFSKFFMKRYLYCRGAVVTSRTKDKKPKE 266
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|167536383|ref|XP_001749863.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163771578|gb|EDQ85242.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 137.502 bits (345), Expect = 2.918e-34 Identity = 81/241 (33.61%), Postives = 128/241 (53.11%), Query Frame = 0 Query: 61 QLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKL---FSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRY 298 Q LV N+ YLV +M++RE + + +YN V+++ V +++Y + F S + P N+ + + F C +YY+QK++EFLDT FI R+S+RQVTFLH++HH SIT++ S + + GD+ +P +N+L HV +Y HY C + WW L +Q+ QF AI Q+LL + GP P++ K+++ Y +ML LF F+ K Y Sbjct: 5 QSLVLANVAYLVFIGAFTLYMKQREPFNP-TTFMRLYNASCVILAGAVCYGMVEYCIRYQFISFVGNPDMIKRNTEAGRHL--HFYC--------------WLYYIQKFWEFLDTVIFIARKSWRQVTFLHIYHHCSITIVTRSFIVYGLSGDLAWPSFLNALVHVFMYSHYLCATFKIKTWWKPFLTQMQLVQFLAILAQALLGIFGGPGYSYPEWIKLMLAFYMCTMLYLFGSFYIKSY 228
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|950885764|ref|XP_014525883.1| (elongation of very long chain fatty acids protein 4-like protein [Blastocystis sp. subtype 4] >gi|902860494|gb|KNB42440.1| elongation of very long chain fatty acids protein 4-like protein [Blastocystis sp. subtype 4]) HSP 1 Score: 136.732 bits (343), Expect = 1.469e-33 Identity = 85/233 (36.48%), Postives = 126/233 (54.08%), Query Frame = 0 Query: 67 NLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYI 299 N+ Y + L M +RE+ + K + VYN I V +++Y F +L + PF+ S I +A V+YLQKY+EF DT+ FILR+S+RQVTFLH++HH+SIT +V + GGD P+L+NS H+ +Y HY C+ LG+ WW + L LQ+ QF I + ++L G C P + LM+ Y +M++LFS F+ KRY+ Sbjct: 36 NVFYFAMIFILLKFMEKRERFNP-KPFMVVYNFICVCLATYC---------FYGMLTCYFLK------KPFLYCSDIDFDTE-NSKAIAHYVYVFYLQKYWEFTDTFLFILRKSYRQVTFLHVYHHSSITFMVRLFLHVYPGGDNCMPVLLNSFVHMLMYTHYLCSILGVKCWWRSILTKLQLIQFVIITIINVLDVINGG-CQEPLWLNWLMIAYMATMILLFSQFYVKRYL 250
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|1176114362|ref|XP_020628266.1| (elongation of very long chain fatty acids protein 7-like [Orbicella faveolata]) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 76/226 (33.63%), Postives = 121/226 (53.54%), Query Frame = 0 Query: 83 RREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPG-----LASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLG--LNP--WWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYI 299 KA+ L++VL VYN+ V +S++ + Y+ +SVL+ P + +C ++P LA V +YYL K+ E+LDT+FFILR+ QVTFLH++HH S+ V+ + + GG YF NS HV +Y +Y + +G + P WW ++ LQ+ QFA I + + A C P ++K +M+ YT M+ LF++F+ K Y+ Sbjct: 186 ENRKAYSLREVLIVYNMALVALSAW-----MVYEFIASVLDIP-------------NFNLLCERVPYVRDDPRQTRLARVCYIYYLSKFVEYLDTFFFILRKKNNQVTFLHVYHHASMCVLWWMVCKWIPGGVSYFGATCNSFVHVVMYAYYGLSAIGPQMRPYLWWKRYITKLQLTQFAVITISGIAAILNH-DCKYPYWAKWVMLCYTLIMMALFTNFYIKTYL 392
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|1207914089|ref|XP_021345751.1| (elongation of very long chain fatty acids protein 4-like [Mizuhopecten yessoensis]) HSP 1 Score: 119.398 bits (298), Expect = 5.182e-27 Identity = 86/285 (30.18%), Postives = 144/285 (50.53%), Query Frame = 0 Query: 18 MGTLYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPGLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNP----WWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRY 298 M +L R E + + A + R +G L T+P + +V + YL+L MR R KA ++K L VYN VL+++Y+ L +S LN + + + N+LPL LA V YY K EF+DT+FF+LR+ +Q++FLH++HH+++ ++ + F GG+ Y +NS H+ +Y +YF +G + WW ++ LQ+ QF IF +L + Y CG P+ + ++ Y S ++LFS+F+++ Y Sbjct: 1 MWSLTRIYHEYNWVMKDATDPRTSGWLLMTSPWPTVSLV-----------ILYLILVIQGQRWMRDR-KALEIKNGLMVYNFCLVLLNAYIFYEFL----MTSWLNPAFNKGCQT-------MDYSTNELPLR---LAKVCWWYYFSKIIEFMDTFFFVLRKKNQQISFLHVYHHSTMPLLWWIGVKFVPGGESYLSGSINSFIHILMYTYYFLAAMGPHMQKFLWWKRYMTALQLIQFWWIFGHALYSLYLS--CGYPNGYNVALICYVMSHILLFSNFYYRTY 257
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|950885193|ref|XP_014525636.1| (elongation of very long chain fatty acids protein 4 [Blastocystis sp. subtype 4] >gi|902860247|gb|KNB42193.1| elongation of very long chain fatty acids protein 4 [Blastocystis sp. subtype 4]) HSP 1 Score: 114.39 bits (285), Expect = 1.328e-25 Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 0 Query: 164 QKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPA 304 KY+E++DT+ F+LR+SFRQVTFLH++HH+S+T +V + GGD ++ NS H+ +Y HY C+ L + WW ++L LQ+ QF I +++ +G C P + LM+ Y +M+VLFS F+ RY L PA Sbjct: 108 HKYWEYIDTFLFVLRKSFRQVTFLHVYHHSSVTAVVRLFLMTYPGGDNCILVIANSFIHMLMYTHYLCSVLKMKCWWRSYLTKLQLIQFLIITYVNVVDLIKG-NCQIPTWMNYLMIGYMITMIVLFSRFYISRY-LTAPA 246
BLAST of EWM24259.1 vs. NCBI_GenBank
Match: gi|383849790|ref|XP_003700519.1| (PREDICTED: elongation of very long chain fatty acids protein 7-like [Megachile rotundata]) HSP 1 Score: 115.161 bits (287), Expect = 1.375e-25 Identity = 83/261 (31.80%), Postives = 124/261 (47.51%), Query Frame = 0 Query: 65 WMNLG----YLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHP----GLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGL-NPWWSAHLATLQVAQFAAIFLQ-SLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYDMCGVMKNDP 315 W+ LG YL L + R K L +V+ YN + +++ +YV F L H SF+C + + +A V +Y++ K F+ LDT FFILR+ QV+FLH++HHT + + F GG + F VNS H+ +Y +Y T L L PWW ++ LQ+ QF + L LLA+ E CG P ++ +M+ M++LF DF++K YI R+P GV P Sbjct: 34 WVCLGILGFYLYFVQDLGPSIMARRKPFNLDRVVQAYNAMQIVICTYV---------FYKALQLAWLGH----------YSFVCEPVDYSYNPRALEIARVVWMYFMVKLFDLLDTIFFILRKKHNQVSFLHVYHHTGMAFGTWAATKFLAGGHITFLGTVNSFVHIVMYSYYLATSLRLYKPWWKKYVTQLQLTQFCVLLLHFVLLAWTED--CGFPKWTAAVMIPQNVFMIILFGDFYYKAYI-RKPKVAQNGVSSEVP 272 The following BLAST results are available for this feature:
BLAST of EWM24259.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|