EWM24290.1, cds6383 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|585105682|gb|EWM24290.1| (atp-dependent dna helicase, partial [Nannochloropsis gaditana]) HSP 1 Score: 1790.01 bits (4635), Expect = 0.000e+0 Identity = 878/878 (100.00%), Postives = 878/878 (100.00%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLSNDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVARAHADSVVRREEGATVEAVAHGNVLEYEGVETLLRIFEAKPPSSGENIQRESQPSSSSSSSSSKGSSQSKNKFLLEPTASPSSSMKLSMGGMSKKKPPTSLQKSKSAPIANACTAPAPSSISDLPPGWTTVTYGDRFEISTPPPSSGDEENEGGELTLMPGTEPVLSTRFSIDDLPIPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSNWGGEEDDEQANELVAAGLACGGEPEDGLLFNAYVDPGFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKPVVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGDGLPIKPNTFRQGALYRYLLRDDLKNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAHVLELGGWRDERATEEVKHRLSIPLMVAKVAK 878 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLSNDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVARAHADSVVRREEGATVEAVAHGNVLEYEGVETLLRIFEAKPPSSGENIQRESQPSSSSSSSSSKGSSQSKNKFLLEPTASPSSSMKLSMGGMSKKKPPTSLQKSKSAPIANACTAPAPSSISDLPPGWTTVTYGDRFEISTPPPSSGDEENEGGELTLMPGTEPVLSTRFSIDDLPIPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSNWGGEEDDEQANELVAAGLACGGEPEDGLLFNAYVDPGFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKPVVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGDGLPIKPNTFRQGALYRYLLRDDLKNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAHVLELGGWRDERATEEVKHRLSIPLMVAKVAK Sbjct: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLSNDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVARAHADSVVRREEGATVEAVAHGNVLEYEGVETLLRIFEAKPPSSGENIQRESQPSSSSSSSSSKGSSQSKNKFLLEPTASPSSSMKLSMGGMSKKKPPTSLQKSKSAPIANACTAPAPSSISDLPPGWTTVTYGDRFEISTPPPSSGDEENEGGELTLMPGTEPVLSTRFSIDDLPIPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSNWGGEEDDEQANELVAAGLACGGEPEDGLLFNAYVDPGFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKPVVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGDGLPIKPNTFRQGALYRYLLRDDLKNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAHVLELGGWRDERATEEVKHRLSIPLMVAKVAK 878
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|764609253|ref|WP_044429185.1| (DNA helicase RecG [Skermanella aerolata] >gi|763834817|gb|KJB95270.1| ATP-dependent DNA helicase RecG [Skermanella aerolata KACC 11604]) HSP 1 Score: 304.679 bits (779), Expect = 4.148e-88 Identity = 190/440 (43.18%), Postives = 240/440 (54.55%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVARAHAD 437 A+E G QAA++APTEILA QH +TL L+ V R+ +LT K GKAR + E L GEIDI IGTH+L D+V FRDL + VIDE+HRFGV QR +LS +VL M+ATPIPRTL LT YGDM+VSRL E P +TT PL L ++ +++KI E G +V+WV P ++E E V + + T+RH + ++GE VG+VHG+M K + F+AG VLV+T+V+EVGV+VP+A+V ++EHAE FGL+QLHQLRGRIGRG A S C+L YD SP E + RL +K T DGF IAE+DL+LRG GEVLG RQSG FRL DLA H LL A AR D Sbjct: 310 AVETGAQAALMAPTEILARQHFETLAPLADAAGV------------------------------------------------RLGILTGRDK-GKARAAIYERLASGEIDIAIGTHALFQDDVAFRDLAMAVIDEQHRFGVHQRLQLSAKGRSVDVLVMTATPIPRTLTLTAYGDMDVSRLTEKPPGRKPITTITIPLERLEEVIAGIQRKITE--GARVYWVCPLVDES--------------------EVVDLAAATERHALLRSMIGER-VGLVHGKMKPTDKDAVMAAFAAGDLDVLVATTVIEVGVNVPEASVMVIEHAERFGLAQLHQLRGRIGRGTAAST--------------CILLYD--SPLSETSKARLAIMKGTEDGFLIAEEDLRLRGAGEVLGTRQSGMPEFRLADLAVHGELLAAARDDARLIMD 661
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|517517629|ref|WP_018687837.1| (ATP-dependent DNA helicase RecG [Ahrensia kielensis]) HSP 1 Score: 301.982 bits (772), Expect = 4.431e-87 Identity = 192/475 (40.42%), Postives = 260/475 (54.74%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLSND---TNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR--AHADSVVRREEGATVEAVAHGNVLEYEGVETLLRIFE 470 A+E G Q A++APTE+LA QH T++ + A+R G LR+++LT K G R+ +L L GE+DILIGTH++ + VVF+DLGL V+DE+HRFGV QR L++ T++L M+ATPIPRTL+LT+YGDM+VSRLDE P + T PL + +I R+ I E G+K++W+ P +EE E + +TSV QRH+ + G VG+VHG+M K A+ F +G TR+LV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG DQ + C+L Y D P E + RL +++T DGF IAE+DL+LRG GEVLG RQSG GFRL + H LL+ A AR H D + + G + + TLL +FE Sbjct: 318 AVEAGTQGALMAPTEVLARQHFATIKPI-------------------------------------AERAG-----------LRVDLLTGREK-GVVRRDMLAALAAGELDILIGTHAIFQEGVVFKDLGLAVVDEQHRFGVHQRLLLASKGQATDMLVMTATPIPRTLVLTHYGDMDVSRLDEKPVGRKPIKTVALPLGRIEEITTRMGDAIKE--GQKIYWICPLVEEN--------------------EDLGLTSVEQRHKELSSRFGSN-VGLVHGQMKGAEKDAAMAAFKSGETRILVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRG------------DQ--DSSCLLLYKD--PLGETSRARLEVMRQTEDGFRIAEEDLQLRGEGEVLGTRQSGMAGFRLARMEAHGHLLEIARDDARLIIHNDPKLETQRG--------------QALRTLLYLFE 690
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|928974609|ref|WP_053999030.1| (ATP-dependent DNA helicase RecG [Ahrensia marina] >gi|928225324|gb|KPB01387.1| ATP-dependent DNA helicase RecG [Ahrensia marina]) HSP 1 Score: 301.597 bits (771), Expect = 6.756e-87 Identity = 192/475 (40.42%), Postives = 260/475 (54.74%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLSND---TNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR--AHADSVVRREEGATVEAVAHGNVLEYEGVETLLRIFE 470 A+E G Q A++APTE+LA QH T++ + AQ G LR+++LT K G R+ +L L G+IDILIGTH++ + VVF+DLGL V+DE+HRFGV QR L++ T++L M+ATPIPRTL+LT+YGDM+VSRLDE P + T PL + +I R+ I E +K++W+ P +EE + +++TSV QRH+ + G + VG+VHG+M K A+ F +G TR+LV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG DR E C+L Y D P E + RL +++T DGF IAE+DL+LRG GEVLG RQSG GFRL + H LL+ A AR H D + E G + + TLL +FE Sbjct: 318 AVEAGAQGALMAPTEVLARQHFATIKPI-------------------------------------AQSAG-----------LRVDLLTGREK-GAVRRDMLAALAAGDIDILIGTHAIFQEGVVFKDLGLAVVDEQHRFGVHQRLLLASKGQATDMLVMTATPIPRTLVLTHYGDMDVSRLDEKPVGRKPIKTVALPLGRIEEIIARMGNAIKEE--QKIYWICPLVEEN--------------------DDLELTSVEQRHKDLASRFGTD-VGLVHGQMKGAEKDAAMAAFKSGETRILVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRG-------DR-------ESSCLLLYKD--PLGETSRARLDVMRQTEDGFRIAEEDLRLRGEGEVLGTRQSGMAGFRLARMEAHGHLLEIARDDARLIIHNDPKLETERG--------------QALRTLLYLFE 690
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|1001891549|ref|WP_061345404.1| (DNA helicase RecG [Ochrobactrum anthropi] >gi|1001191088|gb|KXO78515.1| ATP-dependent DNA helicase RecG [Ochrobactrum anthropi]) HSP 1 Score: 298.516 bits (763), Expect = 7.903e-86 Identity = 178/436 (40.83%), Postives = 248/436 (56.88%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR 433 A E G Q+A++APTE+LA QH T+ L+ E G A L + ++G+ R +LE L+ GEIDI+IGTH+L ++V + DL L +IDE+HRFGV QR L+ + ++L M+ATPIPRTL+LT +GDM+VS+L E PA +TT+I P+ + ++ ER+RK + E G+K++W+ P +EE E V++TS +R +++ + GE +G++HGRM+ K +A+R F G TRVLV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG S C+L Y P E A RL +++T DGF IAE+DLKLRG GE+LG RQSG GFRL + H LL+ A + AR Sbjct: 319 AAESGGQSALMAPTEVLARQHFATIAPLA--------------EKAGLKA-----------------------------------ALLTGREKGRDRNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVLVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPAGRQPITTAIVPMERMGELVERIRKAVGE--GQKIYWICPLVEES--------------------EVVELTSAEERFESLKPVFGER-IGLIHGRMNGAEKDEAMRAFKQGETRVLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPST--------------CLLLYK--GPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHRDLLEIARKDAR 666
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|665431639|gb|KEY02858.1| (ATP-dependent DNA helicase RecG, partial [Brucella ceti B1/94]) HSP 1 Score: 292.352 bits (747), Expect = 1.800e-85 Identity = 174/436 (39.91%), Postives = 245/436 (56.19%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR 433 A E G Q+A++APTE+LA QH T+ L+ E G A L + ++G+ R +LE L+ GEIDI+IGTH+L ++V + DL +IDE+HRFGV QR L+ + ++L M+ATPIPRTL+LT +GDM+VS+L E P +TT+I P+ + ++ ER+RK + E+ +K++W+ P +EE E V++TS +R +++ + GE +G++HGRM K +A+R F G TR+LV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG S C+L Y P E A RL +++T DGF IAE+DLKLRG GE+LG RQSG GFRL + H LL+ A + AR Sbjct: 133 AAESGGQSALMAPTEVLARQHFATIAPLA--------------EKAGLKA-----------------------------------ALLTGREKGRERNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVFVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPVGRQPITTAIVPMERMGELVERIRKAVSED--QKIYWICPLVEES--------------------EVVELTSAEERFESLKSVFGER-IGLIHGRMSGAEKDEAMRAFKQGETRLLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPST--------------CLLLYK--GPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGDLLEIARKDAR 480
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|1103227422|ref|WP_071633731.1| (DNA helicase RecG [Ochrobactrum cytisi] >gi|1102134637|gb|OIS91182.1| ATP-dependent DNA helicase RecG [Ochrobactrum cytisi]) HSP 1 Score: 297.36 bits (760), Expect = 2.421e-85 Identity = 177/436 (40.60%), Postives = 247/436 (56.65%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR 433 A E G Q+A++APTE+LA QH T+ L+ E G A L + ++G+ R +LE L+ GEIDI+IGTH+L ++V + DL L +IDE+HRFGV QR L+ + ++L M+ATPIPRTL+LT +GDM+VS+L E PA +TT+I P+ + ++ ER+RK + E G+K++W+ P +EE E V++TS +R +++ + G+ +G++HGRM K +A+R F G TRVLV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG S C+L Y P E A RL +++T DGF IAE+DLKLRG GE+LG RQSG GFRL + H LL+ A + AR Sbjct: 319 AAESGGQSALMAPTEVLARQHFATITPLA--------------EKAGLKA-----------------------------------ALLTGREKGRDRNAVLEGLKTGEIDIVIGTHALFQEKVEYHDLVLVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPAGRQPITTAIVPMERMSELVERIRKAVAE--GQKIYWICPLVEES--------------------EVVELTSAEERFESLKPVFGDR-IGLIHGRMSGAEKDEAMRAFKQGETRVLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPST--------------CLLLYK--GPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGDLLEIARKDAR 666
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|640665009|ref|WP_025090210.1| (DNA helicase RecG [Ochrobactrum intermedium]) HSP 1 Score: 296.975 bits (759), Expect = 2.766e-85 Identity = 177/436 (40.60%), Postives = 248/436 (56.88%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR 433 A E G Q+A++APTE+LA QH T+ L+ E G A L + ++G+ R +LE L+ GEIDI+IGTH+L ++V + DL L +IDE+HRFGV QR L+ + ++L M+ATPIPRTL+LT +GDM+VS+L E PA +TT+I P+ + ++ ER+RK + E G+K++W+ P +EE E V++TS +R +++ + G+ +G++HGRM+ K +A+R F G TRVLV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG S C+L Y P E A RL +++T DGF IAE+DLKLRG GE+LG RQSG GFRL + H LL+ A + AR Sbjct: 319 AAESGGQSALMAPTEVLARQHFATIAPLA--------------EKAGLKA-----------------------------------ALLTGREKGRDRSAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVLVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPAGRQPITTAIVPMERMGELVERIRKAVSE--GQKIYWICPLVEES--------------------EVVELTSAEERFESLKPVFGDR-IGLIHGRMNGAEKDEAMRAFKQGETRVLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPST--------------CLLLYK--GPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGDLLEIARKDAR 666
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|493517145|ref|WP_006471375.1| (MULTISPECIES: DNA helicase RecG [Ochrobactrum] >gi|443486639|gb|ELT49413.1| ATP-dependent DNA helicase RecG [Ochrobactrum intermedium M86] >gi|542083774|gb|ERI15175.1| ATP-dependent DNA helicase RecG [Ochrobactrum sp. EGD-AQ16] >gi|1025935102|gb|OAB82917.1| ATP-dependent DNA helicase RecG [Ochrobactrum intermedium] >gi|1026783651|gb|OAE42075.1| ATP-dependent DNA helicase RecG [Ochrobactrum intermedium] >gi|1145646613|gb|OOC58117.1| ATP-dependent DNA helicase RecG [Ochrobactrum intermedium M86]) HSP 1 Score: 296.975 bits (759), Expect = 3.539e-85 Identity = 177/436 (40.60%), Postives = 248/436 (56.88%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR 433 A E G Q+A++APTE+LA QH T+ L+ E G A L + ++G+ R +LE L+ GEIDI+IGTH+L ++V + DL L +IDE+HRFGV QR L+ + ++L M+ATPIPRTL+LT +GDM+VS+L E PA +TT+I P+ + ++ ER+RK + E G+K++W+ P +EE E V++TS +R +++ + G+ +G++HGRM+ K +A+R F G TRVLV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG S C+L Y P E A RL +++T DGF IAE+DLKLRG GE+LG RQSG GFRL + H LL+ A + AR Sbjct: 319 AAESGGQSALMAPTEVLARQHFATIAPLA--------------EKAGLKA-----------------------------------ALLTGREKGRDRNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVLVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPAGRQPITTAIVPMERMGELVERIRKAVGE--GQKIYWICPLVEES--------------------EVVELTSAEERFESLKPVFGDR-IGLIHGRMNGAEKDEAMRAFKQGETRVLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPST--------------CLLLYK--GPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGDLLEIARKDAR 666
BLAST of EWM24290.1 vs. NCBI_GenBank
Match: gi|548358671|gb|ERL99972.1| (ATP-dependent DNA helicase RecG [Ochrobactrum intermedium 229E]) HSP 1 Score: 296.59 bits (758), Expect = 3.898e-85 Identity = 177/436 (40.60%), Postives = 248/436 (56.88%), Query Frame = 0 Query: 1 AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLS---NDTNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKGFRLVDLAKHEGLLDEANQVAR 433 A E G Q+A++APTE+LA QH T+ L+ E G A L + ++G+ R +LE L+ GEIDI+IGTH+L ++V + DL L +IDE+HRFGV QR L+ + ++L M+ATPIPRTL+LT +GDM+VS+L E PA +TT+I P+ + ++ ER+RK + E G+K++W+ P +EE E V++TS +R +++ + G+ +G++HGRM+ K +A+R F G TRVLV+T+V+EVGVDVPDAT+ ++EHAE FGLSQLHQLRGR+GRG S C+L Y P E A RL +++T DGF IAE+DLKLRG GE+LG RQSG GFRL + H LL+ A + AR Sbjct: 321 AAESGGQSALMAPTEVLARQHFATIAPLA--------------EKAGLKA-----------------------------------ALLTGREKGRDRNAVLEGLKSGEIDIVIGTHALFQEKVEYHDLVLVIIDEQHRFGVHQRLMLTAKGSAPDMLVMTATPIPRTLVLTAFGDMDVSKLTEKPAGRQPITTAIVPMERMGELVERIRKAVGE--GQKIYWICPLVEES--------------------EVVELTSAEERFESLKPVFGDR-IGLIHGRMNGAEKDEAMRAFKQGETRVLVATTVIEVGVDVPDATIIVIEHAERFGLSQLHQLRGRVGRGDKPST--------------CLLLYK--GPLGEIAQARLKVMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRLASIEAHGDLLEIARKDAR 668 The following BLAST results are available for this feature:
BLAST of EWM24290.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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