EWM24317.1, cds6361 (CDS) Nannochloropsis gaditana

Overview
NameEWM24317.1
Unique Namecds6361
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:380263..380327 -
Alignment locationCM002468.1:378542..379893 -
Alignment locationCM002468.1:378436..378494 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24317.1
Productsolute carrier family 35 member b1
Orig transcript idgnl|cribi|Naga_100047g18.6080.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:380263..380327 -
CM002468.1supercontigCM002468.1:378542..379893 -
CM002468.1supercontigCM002468.1:378436..378494 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013657UAA
Homology
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|585105709|gb|EWM24317.1| (solute carrier family 35 member b1 [Nannochloropsis gaditana])

HSP 1 Score: 998.423 bits (2580), Expect = 0.000e+0
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0
Query:    1 MEGNGGIDSKSGSLMEEGGLRSSLASGEKGMQPMEVEMSGPAASTLFGGDAQLLKPKSLRRGSSTSSTKPEAPVKRSSSQMDVNTASGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNAGKTEPLDREGGSMEDGRLNGGVDKSAIRSLVEEERRAHLQSEAKPLLAATDDGPEEEEREGKWGERVDMWVVEIGFPNDKTNLDG 491
            MEGNGGIDSKSGSLMEEGGLRSSLASGEKGMQPMEVEMSGPAASTLFGGDAQLLKPKSLRRGSSTSSTKPEAPVKRSSSQMDVNTASGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNAGKTEPLDREGGSMEDGRLNGGVDKSAIRSLVEEERRAHLQSEAKPLLAATDDGPEEEEREGKWGERVDMWVVEIGFPNDKTNLDG
Sbjct:    1 MEGNGGIDSKSGSLMEEGGLRSSLASGEKGMQPMEVEMSGPAASTLFGGDAQLLKPKSLRRGSSTSSTKPEAPVKRSSSQMDVNTASGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNAGKTEPLDREGGSMEDGRLNGGVDKSAIRSLVEEERRAHLQSEAKPLLAATDDGPEEEEREGKWGERVDMWVVEIGFPNDKTNLDG 491          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|1210518199|dbj|GAX22811.1| (solute carrier family 35 (UDP-galactose transporter), member B1 [Fistulifera solaris])

HSP 1 Score: 425.631 bits (1093), Expect = 1.380e-142
Identity = 209/345 (60.58%), Postives = 256/345 (74.20%), Query Frame = 0
Query:   82 DVNTASGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNAGKTEPL------DREGGSME 420
            D ++   +IWL VCF GIM SF+ YG++MEY TSGGR+LHELS +FVTS LY+ TA  GRYVR E PTT+ P R  VL +TSMGST+CSVRSLRYVIYP+QVLAKSCKP+PVMLMG +MGK+YPL+KY+NV++I  GVAMFM      GG  ++ + +          G +LLFISLCFDGGTGAYEDKLM+ H V PFDLMYN+ LGK ILAG+GL+VL Q++ FI+M  E GF L+ LG+SGA GQVFIFVTI+KFGALTCSI+GLARKV TLVASIY YGH+LN +Q+ GL V+ A+M+  F+ +K K   GHG    G    + E +      D EGG +E
Sbjct:   99 DYSSKLDLIWLIVCFFGIMASFVCYGLLMEYTTSGGRELHELSFLFVTSALYTITAAAGRYVRDETPTTIPPGRFAVLGLTSMGSTFCSVRSLRYVIYPIQVLAKSCKPVPVMLMGTLMGKRYPLRKYINVVMIVLGVAMFM------GGGDSKHKGSDSDASPKQMIGIVLLFISLCFDGGTGAYEDKLMSVHSVQPFDLMYNIQLGKTILAGIGLLVLNQLHIFIQMVQEMGFLLVALGLSGALGQVFIFVTIAKFGALTCSIIGLARKVTTLVASIYFYGHALNAVQSAGLFVSVASMVMNFWGKKSK-KEGHGGESSGAVPEEMEKILVEEHDDEEGGDVE 436          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|1210528874|dbj|GAX12517.1| (solute carrier family 35 (UDP-galactose transporter), member B1 [Fistulifera solaris])

HSP 1 Score: 421.009 bits (1081), Expect = 1.336e-140
Identity = 208/326 (63.80%), Postives = 250/326 (76.69%), Query Frame = 0
Query:   82 DVNTASGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNAG 407
            D ++   +IWL VCF GIM SF+ YG++MEY TSGGR+LHELS +FVTS LY+ TA  GRYVR E PTT+ P R  VL +TSMGST+CSVRSLRYVIYP+QVLAKSCKP+PVMLMG +MGK+YPL+KY+NV++I  GVAMFM G    G    +G   S A       G +LLFISLCFDGGTGAYEDKLM+ H V PFDLMYN+ LGK ILAG+GL+VL Q++ FI+M  E GF L+ LG+SGA GQVFIFVTI+KFGALTCSI+GLARKV TLVASIY YGH+LN +Q+ GL V+ A+M+  F+ +K K   GH    GG N+G
Sbjct:  102 DKSSKLDLIWLIVCFFGIMASFVCYGLLMEYTTSGGRELHELSFLFVTSALYTITAAAGRYVRDETPTTIPPGRFAVLGLTSMGSTFCSVRSLRYVIYPIQVLAKSCKPVPVMLMGTLMGKRYPLRKYINVVMIVLGVAMFMGG----GDSKHKGSGDSDASPQQMI-GIVLLFISLCFDGGTGAYEDKLMSVHSVQPFDLMYNIQLGKTILAGIGLLVLNQLHIFIQMVQEMGFLLVALGLSGALGQVFIFVTIAKFGALTCSIIGLARKVTTLVASIYFYGHALNAVQSAGLFVSVASMVMNFWGKKSK-KEGH----GGENSG 417          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|219109745|ref|XP_002176626.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411161|gb|EEC51089.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 410.609 bits (1054), Expect = 5.742e-136
Identity = 205/335 (61.19%), Postives = 259/335 (77.31%), Query Frame = 0
Query:   89 MIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEG-AEGRAASKAKENATTA---GAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNA----GKTEPLDRE 415
            + WL VCF+GIM SF+ YG+++EY TSG R+LHELS +FVTS LY+ TA  GRYVR E P+T+ PAR  +L +TSMGST+CSVRSLRYVIYP+QVLAKSCKP+PVM+MGA MGK YPL+KY+NV++I AGVA+FM      GG+G  + ++A+++++  +TA   G +LLF+SLCFDGGTGAYEDKLM+ H V PFDLMYN+ LGK ILAG+ L+VL Q++ F++M  + GF L+ LG+SGA GQVFIFVTI+KFGALTCSI+GLARKV TLVASIY YGH LNG+Q LGL ++  AM+  F+ +KG G H  G   G G       +TE L RE
Sbjct:  145 LFWLTVCFLGIMASFVCYGLLLEYTTSGDRELHELSFLFVTSGLYTLTAAAGRYVRDETPSTIPPARFAILGLTSMGSTFCSVRSLRYVIYPIQVLAKSCKPVPVMIMGAFMGKHYPLRKYINVVMIVAGVALFM-----GGGDGDNKKKSANQSEDEGSTAQLIGILLLFVSLCFDGGTGAYEDKLMSVHSVQPFDLMYNIQLGKTILAGVALLVLNQLHIFLQMVQDMGFLLVALGLSGALGQVFIFVTIAKFGALTCSIIGLARKVTTLVASIYFYGHVLNGVQFLGLCISVTAMVLNFWGKKGGGGHHAGGPSGAGAPLHADTETEKLVRE 474          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|298708152|emb|CBJ30493.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 398.667 bits (1023), Expect = 3.705e-132
Identity = 200/302 (66.23%), Postives = 235/302 (77.81%), Query Frame = 0
Query:   87 SGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFE 388
            +G +WL +CF+GIM SFI YGIVMEYATSGGR+LHELS+IF+TSL+YS TA+ GR +  E+PTT+   +++VL MTSMGST+ SVRSLRYVIYPVQVL KSCKPIPVMLMGA +GKKYPLKKY+NV +I AGVA+FM   Q   G G  G             G  LLF+SLCFDGGTGAYEDKLM KHHVGPFDLM+N+   K +LAGLGL+V GQI  F  M H TG  LLLLG+SGA GQVFIFVTISKFGALTCSI+GLARK+VTL+ASI IYGH +N +Q +GL +A  AM+  F +
Sbjct:   38 AGYLWLGLCFLGIMCSFIVYGIVMEYATSGGRELHELSMIFLTSLMYSVTAWYGRRMNGEEPTTIPRTQMLVLGMTSMGSTFTSVRSLRYVIYPVQVLGKSCKPIPVMLMGAFLGKKYPLKKYLNVALIVAGVALFM---QSGSGAGKPG-----GSSGGQLFGLTLLFMSLCFDGGTGAYEDKLMNKHHVGPFDLMFNIQFAKMLLAGLGLVVTGQITGFFNMVHSTGPVLLLLGLSGAMGQVFIFVTISKFGALTCSIIGLARKIVTLLASILIYGHKVNLMQFVGLAIAVGAMVFNFLD 331          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|397647086|gb|EJK77553.1| (hypothetical protein THAOC_00607 [Thalassiosira oceanica])

HSP 1 Score: 378.637 bits (971), Expect = 1.234e-123
Identity = 201/301 (66.78%), Postives = 240/301 (79.73%), Query Frame = 0
Query:   87 SGMIWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFF 387
            S   WLA CF GIMGSF+AYG+++E+ATSGG+ LHELS +FVTSLLY+ TA VGRY RAEKP+T+ PA+  VL +TSMGST+ SVR+LRYVIYP+QVLAKSCKP+PVMLMGA+MGKKYP+KKY+ V+ I  GV +FM G  K+  +  + + AS     +   G  LLFISLCFDGGTGAYEDKLM+ H VGPFDLMYN+ LGK ILAG+GLIVL Q++ F +MC + GF L+ LG+SGA GQVFIFVTI+KFGALTCSI+GLARKV TLVASIY YGH LN IQ LGL ++  AM S FF
Sbjct:  123 SEYFWLAFCFFGIMGSFVAYGLLLEFATSGGKHLHELSFLFVTSLLYTMTASVGRYARAEKPSTIPPAQFAVLGLTSMGSTFFSVRALRYVIYPIQVLAKSCKPVPVMLMGALMGKKYPIKKYIKVVFIVGGVGLFMGGGDKKKDDLEDDKDAS-----SQLIGVTLLFISLCFDGGTGAYEDKLMSVHSVGPFDLMYNIQLGKTILAGIGLIVLNQVHVFAQMCQDMGFLLVALGLSGAVGQVFIFVTIAKFGALTCSIIGLARKVTTLVASIYFYGHHLNSIQALGLFISVGAMSSNFF 418          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|676378183|ref|XP_009032370.1| (hypothetical protein AURANDRAFT_70575 [Aureococcus anophagefferens] >gi|323456853|gb|EGB12719.1| hypothetical protein AURANDRAFT_70575 [Aureococcus anophagefferens])

HSP 1 Score: 372.859 bits (956), Expect = 4.722e-123
Identity = 187/304 (61.51%), Postives = 234/304 (76.97%), Query Frame = 0
Query:   90 IWLAVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENAT-TAGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGK 392
            + LA+ F GIM SFI YGI MEYAT+GGRKLHELSLI VTS LY+ TAYVG+ +R E+PTTV   +L  +AM SMGST+ SVRSLRYVI+PVQVLAKSCKPIPVM+MGA +GK+YPLKKYVNVL+ITAGV +FM+G       G+  +     K   T   G ++LF+SL FDG TGAYEDK+M+  HVGPF+LM+N+ LGKAILA LGL++L +I+YF  M  ETG  LL+LG++GA GQVFIFVTI++FGAL CS++GL RK+ TL+ASI IY H ++  Q +GLV+A  AM+  F ++ GK
Sbjct:   21 VRLAISFFGIMFSFILYGIAMEYATTGGRKLHELSLILVTSTLYTTTAYVGKTLRGEQPTTVPTYKLFFVAMLSMGSTFFSVRSLRYVIFPVQVLAKSCKPIPVMIMGAFLGKRYPLKKYVNVLVITAGVCLFMLG-------GSATKPGDDEKGGMTMIIGCVMLFVSLSFDGATGAYEDKIMSNDHVGPFELMFNIQLGKAILAFLGLVMLNEIDYFFTMVQETGPILLVLGLTGAMGQVFIFVTIAQFGALMCSLIGLGRKITTLIASIIIYQHPVSNQQGVGLVLAVGAMVYNFADKGGK 317          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|1072233902|gb|OEU18632.1| (UAA transporter [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 371.318 bits (952), Expect = 8.905e-123
Identity = 186/288 (64.58%), Postives = 227/288 (78.82%), Query Frame = 0
Query:  100 MGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATT-AGAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGF 386
            M SF+ YG+++EY TSGGRKLHELS +FVTS LY+ TA  GRYVR E  TT+ P+R  +L +TSMGST+ SVRSLRYVIYP+QVLAKSCKP+PVMLMG +MGK+Y  +KY+NV++I  GVA+FM G ++  G+G  G    + K + +   G ILLFISLCFDGGTGAYEDKLM+ H V PFDLMYN+ LGK ILAG+ L+VL Q++ FI+MC E G  L+ LG+SGA GQVFIFVTISKFGALTCSI+GL+RK+ TL+ASIY YGH LNGIQ  GLVV+  AM+  F
Sbjct:    1 MASFVCYGLLLEYTTSGGRKLHELSFLFVTSGLYTLTAAAGRYVRGETLTTIPPSRFAILGLTSMGSTFTSVRSLRYVIYPIQVLAKSCKPVPVMLMGTLMGKRYDFRKYINVVLIVFGVALFMGGGKESKGKGGGGGGDDEEKSSGSQFLGIILLFISLCFDGGTGAYEDKLMSVHSVQPFDLMYNIQLGKTILAGVSLLVLNQLHIFIQMCQEMGLLLVALGLSGAMGQVFIFVTISKFGALTCSIIGLSRKITTLLASIYFYGHHLNGIQISGLVVSVTAMVMNF 288          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|223999051|ref|XP_002289198.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974406|gb|EED92735.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 308.145 bits (788), Expect = 1.247e-98
Identity = 168/254 (66.14%), Postives = 201/254 (79.13%), Query Frame = 0
Query:  136 TAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMGRQKEGGEGAEGRAASKAKENATTA--GAILLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFF 387
            TA VGRYVRAE P+T+ PA+  VL +TSMGST+ SVR+LRYVIYP+QVLAKSCKP+PVMLMGA+MGKKYP KKY+ V +I  GV +FM G  K        +AA   +++A++   G  LLFISLCFDGGTGAYEDKLM+ H VGPFDLMYN+ LGK ILAG+GLIVL Q++ F +MC + GF L+ LG+SGA GQVFIFVTI+KFGALTCSI+GLARKV TLVASIY YGH+LN +Q  GL+V   AMI+ FF
Sbjct:    2 TASVGRYVRAETPSTIPPAQFAVLGLTSMGSTFFSVRALRYVIYPIQVLAKSCKPVPVMLMGALMGKKYPPKKYMKVALIVGGVGLFMGGGSKSK------KAAGDDEKDASSQLIGIALLFISLCFDGGTGAYEDKLMSVHSVGPFDLMYNIQLGKTILAGIGLIVLNQVHVFAQMCQDMGFLLVALGLSGAIGQVFIFVTIAKFGALTCSIIGLARKVTTLVASIYFYGHTLNKVQFFGLIVCIGAMINDFF 249          
BLAST of EWM24317.1 vs. NCBI_GenBank
Match: gi|675168453|ref|XP_008893111.1| (hypothetical protein PPTG_01536 [Phytophthora parasitica INRA-310] >gi|675215175|ref|XP_008916472.1| hypothetical protein PPTG_19717 [Phytophthora parasitica INRA-310] >gi|568083221|gb|ETM98236.1| hypothetical protein PPTG_19717 [Phytophthora parasitica INRA-310] >gi|568106679|gb|ETN21309.1| hypothetical protein PPTG_01536 [Phytophthora parasitica INRA-310])

HSP 1 Score: 241.506 bits (615), Expect = 1.604e-70
Identity = 145/408 (35.54%), Postives = 228/408 (55.88%), Query Frame = 0
Query:   76 RSSSQMDVNTASGM------IWL-AVCFVGIMGSFIAYGIVMEYATSGGRKLHELSLIFVTSLLYSGTAYVGRYVRAEKPTTVAPARLMVLAMTSMGSTYCSVRSLRYVIYPVQVLAKSCKPIPVMLMGAIMGKKYPLKKYVNVLIITAGVAMFMMG--RQKEGGEGAEGRAASKAKENATTAGAI----LLFISLCFDGGTGAYEDKLMAKHHVGPFDLMYNMHLGKAILAGLGLIVLGQINYFIRMCHETGFFLLLLGVSGAFGQVFIFVTISKFGALTCSIMGLARKVVTLVASIYIYGHSLNGIQTLGLVVAFAAMISGFFERKGKGAHGHGHAGGGGNAGKTEPLDREG--GSMEDGRLNGGVDKSAIRSLVEEERRAHLQSEAKPLLAATDDGPEEEEREGK 468
            R+S   +VN  S        +WL A C +GIM SF   G+V+E  T+  R L ELS+ FV  +  S  A      R EKP+T+  + L+++   + GST  S+ +LRYV Y  ++L KSCK IPVM+MG ++GKKY LKKYV+V+++  GVA+F++G   +K+        + +   E   T   +    LL +SL FDG TGA EDK M  +H+G FDLMY +++ KA+ + +G++V G+I  F++    +   LL+L ++GAFGQ FIF TISKFGALT +I+G  RKV+++V S++++GH L+  QT+GL ++FA +   + + +                 + + L +EG   S  D   +   D+  +     ++    + +E    L   +    +  RE +
Sbjct:   46 RNSGLAEVNQVSEQQASKKSVWLLAYCCIGIMVSFTLNGVVLEKITTH-RVLGELSMTFVFCVFNSVVAIGLSRARKEKPSTMPQSFLVIVGALAFGSTIASMVALRYVTYITRILGKSCKSIPVMIMGVLLGKKYALKKYVSVIVLCIGVAIFLLGTAHEKQHHSVQHNESHNSLPEQERTPNMVLGFSLLIVSLLFDGATGALEDKFMEAYHIGAFDLMYYVNIYKALFSAVGMVVNGEIPVFLQYVVPSLPNLLMLSLTGAFGQAFIFFTISKFGALTTAIIGTCRKVLSIVLSVFLFGHVLSVEQTVGLGLSFAGIGLNWVKMRNCFVKSSPTPTAAAEPIELDELAKEGLLESSSDDTADSESDEQDVTVSAHDDEEEAMDAETARKLELVNAWHRQTTREAE 452          
The following BLAST results are available for this feature:
BLAST of EWM24317.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105709|gb|EWM24317.1|0.000e+0100.00solute carrier family 35 member b1 [Nannochloropsi... [more]
gi|1210518199|dbj|GAX22811.1|1.380e-14260.58solute carrier family 35 (UDP-galactose transporte... [more]
gi|1210528874|dbj|GAX12517.1|1.336e-14063.80solute carrier family 35 (UDP-galactose transporte... [more]
gi|219109745|ref|XP_002176626.1|5.742e-13661.19predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298708152|emb|CBJ30493.1|3.705e-13266.23conserved unknown protein [Ectocarpus siliculosus][more]
gi|397647086|gb|EJK77553.1|1.234e-12366.78hypothetical protein THAOC_00607 [Thalassiosira oc... [more]
gi|676378183|ref|XP_009032370.1|4.722e-12361.51hypothetical protein AURANDRAFT_70575 [Aureococcus... [more]
gi|1072233902|gb|OEU18632.1|8.905e-12364.58UAA transporter [Fragilariopsis cylindrus CCMP1102... [more]
gi|223999051|ref|XP_002289198.1|1.247e-9866.14predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|675168453|ref|XP_008893111.1|1.604e-7035.54hypothetical protein PPTG_01536 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6376rna6376Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications