EWM24327.1, cds6346 (CDS) Nannochloropsis gaditana

Overview
NameEWM24327.1
Unique Namecds6346
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:349209..349404 -
Alignment locationCM002468.1:348269..348972 -
Alignment locationCM002468.1:347711..348170 -
Alignment locationCM002468.1:347435..347571 -
Alignment locationCM002468.1:347016..347204 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24327.1
Product26s proteasome non-atpase regulatory subunit 3
Orig transcript idgnl|cribi|Naga_100047g5.6090.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:349209..349404 -
CM002468.1supercontigCM002468.1:348269..348972 -
CM002468.1supercontigCM002468.1:347711..348170 -
CM002468.1supercontigCM002468.1:347435..347571 -
CM002468.1supercontigCM002468.1:347016..347204 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0000502proteasome complex
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0042176regulation of protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR01358626S_Psome_reg_C
IPR000717PCI_dom
IPR013143PAM
Homology
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|585105719|gb|EWM24327.1| (26s proteasome non-atpase regulatory subunit 3 [Nannochloropsis gaditana])

HSP 1 Score: 1140.95 bits (2950), Expect = 0.000e+0
Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 0
Query:    1 MSLIFVPSKRHPATHHVFDERGIDLQIPSLSETRPREDRMAAEDSMETDAPAATEEPKSSITTLDGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMEDEF 561
            MSLIFVPSKRHPATHHVFDERGIDLQIPSLSETRPREDRMAAEDSMETDAPAATEEPKSSITTLDGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMEDEF
Sbjct:    1 MSLIFVPSKRHPATHHVFDERGIDLQIPSLSETRPREDRMAAEDSMETDAPAATEEPKSSITTLDGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMEDEF 561          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|567967999|gb|ETK93153.1| (hypothetical protein L915_03600 [Phytophthora parasitica] >gi|567996460|gb|ETL46570.1| hypothetical protein L916_03545 [Phytophthora parasitica] >gi|570960096|gb|ETP25075.1| hypothetical protein F441_02029 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 437.187 bits (1123), Expect = 5.291e-145
Identity = 229/500 (45.80%), Postives = 324/500 (64.80%), Query Frame = 0
Query:   65 DGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLP-----ETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMED 559
            + LK+ +TLL+T V+T+    I R+LR  +  R+ L  + L +A+   LP     K + LA+LA + +          A+   + +S++ + D +    S S+  AG    PA + LP     E   YL L VL   M+    ++A  +   ++   ++ NRRTLD   AK + Y +   E+    L  +R   ++ HRTACL +DE GQATL+NLLLR+ L DN+ EQA   +++T+FPE  SNNQ  R+LYYVG+++A QL+YT++++KL Q++RKAPA+    A GFRR V KL +IVQLL+G++PER  F+Q  LR++L PYL LT AVR+G+L +F   ++ H A+FK D T+TLILRL HNVIKTGLRKIS SYSRI   +I  KL L+   +AEFVCAKAI DGVIDAV+DHE G+LQ ++  ++Y+T +PQ AF +RITFCLDVHNEAVK++RYP  P    K+     EE+ E EK EEEL +E+ ++M++
Sbjct:   32 EELKRTITLLETVVKTNAKEKIPRILRTTSKLRKTLSVAQLQQAVEQLLPSQNVSKPVLLALLAKIEN-------KAQAAVNEAQASASKDQDVEMTDASSSEVEAGTST-PATVVLPVVDLIEVEIYLFLYVLAALMKYKLNQEALEMVDKVVARCQQFNRRTLDLFQAKVFTYYSNIHEQFGHDLPAIRNTLLSAHRTACLRYDEAGQATLINLLLRNYLKDNMYEQAYKFVSKTTFPESVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPAN---TAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLSQHGAVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALENAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYP--PD-AYKKDLESAEERLEREKQEEELAKEIEDEMDE 517          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|566030398|gb|ETI53309.1| (hypothetical protein F443_03708 [Phytophthora parasitica P1569] >gi|568025703|gb|ETL99707.1| hypothetical protein L917_03463 [Phytophthora parasitica] >gi|568056144|gb|ETM52860.1| hypothetical protein L914_03575 [Phytophthora parasitica] >gi|570334041|gb|ETO81989.1| hypothetical protein F444_03778 [Phytophthora parasitica P1976] >gi|570993876|gb|ETP51109.1| hypothetical protein F442_03683 [Phytophthora parasitica P10297] >gi|970630116|gb|KUF77160.1| 26S proteasome non-ATPase regulatory subunit 3 [Phytophthora nicotianae] >gi|970649039|gb|KUF88414.1| 26S proteasome non-ATPase regulatory subunit 3 [Phytophthora nicotianae])

HSP 1 Score: 436.802 bits (1122), Expect = 9.501e-145
Identity = 229/500 (45.80%), Postives = 323/500 (64.60%), Query Frame = 0
Query:   65 DGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLP-----ETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMED 559
            + LK+ +TLL+T V+T+    I R+LR  +  R+ L  + L +A+   LP     K + LA+LA + +          A+   + +S++ + D +    S S+  AG    PA + LP     E   YL L VL   M+    ++A      ++   ++ NRRTLD   AK + Y +   E+    L  +R   ++ HRTACL +DE GQATL+NLLLR+ L DN+ EQA   +++T+FPE  SNNQ  R+LYYVG+++A QL+YT++++KL Q++RKAPA+    A GFRR V KL +IVQLL+G++PER  F+Q  LR++L PYL LT AVR+G+L +F   ++ H A+FK D T+TLILRL HNVIKTGLRKIS SYSRI   +I  KL L+   +AEFVCAKAI DGVIDAV+DHE G+LQ ++  ++Y+T +PQ AF +RITFCLDVHNEAVK++RYP  P    K+     EE+ E EK EEEL +E+ ++M++
Sbjct:   32 EELKRTITLLETVVKTNAKEKIPRILRTTSKLRKTLSVAQLQQAVEQLLPSQNVSKPVLLALLAKIEN-------KAQAAVNEAQASASKDQDVEMTDASSSEVEAGTST-PATVVLPVVDLIEVEIYLFLYVLAALMKYKLNQEALETVDKVVARCQQFNRRTLDLFQAKVFTYYSNIHEQFGHDLPAIRNTLLSAHRTACLRYDEAGQATLINLLLRNYLKDNMYEQAYKFVSKTTFPESVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPAN---TAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLSQHGAVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALENAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYP--PD-AYKKDLESAEERLEREKQEEELAKEIEDEMDE 517          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|675184059|ref|XP_008900914.1| (hypothetical protein PPTG_08551 [Phytophthora parasitica INRA-310] >gi|568099138|gb|ETN13856.1| hypothetical protein PPTG_08551 [Phytophthora parasitica INRA-310])

HSP 1 Score: 434.491 bits (1116), Expect = 6.984e-144
Identity = 228/500 (45.60%), Postives = 323/500 (64.60%), Query Frame = 0
Query:   65 DGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLP-----ETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMED 559
            + LK+ +TLL+T V+T+    I R+LR  +  R+ L  + L +A+   LP     K + LA+LA + +          A+   + +S++ + D +    S S+  AG    PA + LP     E   YL L VL   M+    ++A      ++   ++ NRRTLD   AK + Y +   E+    L  +R   ++ HRTACL +DE GQATL++LLLR+ L DN+ EQA   +++T+FPE  SNNQ  R+LYYVG+++A QL+YT++++KL Q++RKAPA+    A GFRR V KL +IVQLL+G++PER  F+Q  LR++L PYL LT AVR+G+L +F   ++ H A+FK D T+TLILRL HNVIKTGLRKIS SYSRI   +I  KL L+   +AEFVCAKAI DGVIDAV+DHE G+LQ ++  ++Y+T +PQ AF +RITFCLDVHNEAVK++RYP  P    K+     EE+ E EK EEEL +E+ ++M++
Sbjct:   32 EELKRTITLLETVVKTNAKEKIPRILRTTSKLRKTLSVAQLQQAVEQLLPSQNVSKPVLLALLAKIEN-------KAQAAVNEAQASASKDQDVEMTDASSSEVEAGTST-PATVVLPVVDLIEVEIYLFLYVLAALMKYKLNQEALETVDKVVARCQQFNRRTLDLFQAKVFTYYSNIHEQFGHDLPAIRNTLLSAHRTACLRYDEAGQATLISLLLRNYLKDNMYEQAYKFVSKTTFPESVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPAN---TAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLSQHGAVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALENAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYP--PD-AYKKDLESAEERLEREKQEEELAKEIEDEMDE 517          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|669136528|ref|XP_008603832.1| (hypothetical protein SDRG_00145 [Saprolegnia diclina VS20] >gi|530744167|gb|EQC42409.1| hypothetical protein SDRG_00145 [Saprolegnia diclina VS20])

HSP 1 Score: 422.55 bits (1085), Expect = 8.306e-140
Identity = 231/494 (46.76%), Postives = 317/494 (64.17%), Query Frame = 0
Query:   67 LKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQ-GEEKGEEEKTEEELVQELGEDMED 559
            LKKNV L++  V ++    + RV R  +  RR L P+ L+ A++  L +D  ++   L  +  +  D             P+       +D  EK  S     +          L E  TYL LLV+   ++     +A + A  +     + NRRTLD  AA+   Y A   ER  +    +RPL +  HRTACL  DE+GQAT+LNLLLR+ L +NL EQA  L+++T+FPE  SNNQ  R+LYYVG++ A QL+YTD+++KL Q++RKAP +    A+GFRR V KL +IVQLL+G++PER+ F+Q  L+ +L PYL LT AVR+G+L +F   +   A +FK DKTHTLILRL HNVIKTGLRKI+ SYS+I  ++I  KL LD P +AEFVCAKAI DGVIDAV+DH+ G++QS++  D+Y+T EPQQAFHKRITFCLDVHNEAVK++RYP  P  GA + D +  EE+ E EK E+EL +E+ E++++
Sbjct:    8 LKKNVALIEKVVASNNKEKLARVFRTTSAIRRGLTPAELTRAVTEILAEDNEIRTSLLQFIGLVKPDAADDVDMNAGEDDPA-------VDDVEKDASVHMERSE---------LIEVETYLSLLVIALLLKSQLGAEAQACADLVRQRCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLTAHRTACLRCDEIGQATVLNLLLRNYLHENLYEQAYKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLEYTDSYNKLMQSIRKAPQN---TAIGFRRTVYKLAIIVQLLMGEVPERSIFNQTELKTALLPYLQLTNAVRVGNLEDFTAVLNQFADVFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICTKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETVDVYATTEPQQAFHKRITFCLDVHNEAVKAMRYP--P--GAYKKDLESAEERLEREKQEDELAKEIEEELDE 478          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|970658937|gb|KUF96643.1| (FK506-binding protein 1 [Phytophthora nicotianae])

HSP 1 Score: 421.779 bits (1083), Expect = 3.126e-139
Identity = 220/477 (46.12%), Postives = 308/477 (64.57%), Query Frame = 0
Query:   88 RVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLP-----ETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMED 559
            R+LR  +  R+ L  + L +A+   LP     K + LA+LA + +          A+   + +S++ + D +    S S+  AG    PA + LP     E   YL L VL   M+    ++A      ++   ++ NRRTLD   AK + Y +   E+    L  +R   ++ HRTACL +DE GQATL+NLLLR+ L DN+ EQA   +++T+FPE  SNNQ  R+LYYVG+++A QL+YT++++KL Q++RKAPA+    A GFRR V KL +IVQLL+G++PER  F+Q  LR++L PYL LT AVR+G+L +F   ++ H A+FK D T+TLILRL HNVIKTGLRKIS SYSRI   +I  KL L+   +AEFVCAKAI DGVIDAV+DHE G+LQ ++  ++Y+T +PQ AF +RITFCLDVHNEAVK++RYP  P    K+     EE+ E EK EEEL +E+ ++M++
Sbjct:   28 RILRTTSKLRKTLSVAQLQQAVEQLLPSQNVSKPVLLALLAKIEN-------KAQAAVNEAQASASKDQDVEMTDASSSEVEAGTST-PATVVLPVVDLIEVEIYLFLYVLAALMKYKLNQEALETVDKVVARCQQFNRRTLDLFQAKVFTYYSNIHEQFGHDLPAIRNTLLSAHRTACLRYDEAGQATLINLLLRNYLKDNMYEQAYKFVSKTTFPESVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPAN---TAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLSQHGAVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALENAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYP--PD-AYKKDLESAEERLEREKQEEELAKEIEDEMDE 490          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|301095603|ref|XP_002896901.1| (26S proteasome non-ATPase regulatory subunit 3 [Phytophthora infestans T30-4] >gi|262108548|gb|EEY66600.1| 26S proteasome non-ATPase regulatory subunit 3 [Phytophthora infestans T30-4])

HSP 1 Score: 421.009 bits (1081), Expect = 1.684e-138
Identity = 227/506 (44.86%), Postives = 321/506 (63.44%), Query Frame = 0
Query:   65 DGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLP-----ETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTT------AVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMED 559
            + LK+ +TLL+T V+T+    I+R+LR  +  R+ L  + L +A+   LP     K + LA+LA +            A++  + ++ T + D +    S  +  A   A P  + LP     E   YL L VL   M+    ++A +    ++   ++ NRRTLD   AK + Y +   E+    LA +R   +  HRTACL +DE GQATL+NLLLR+ L DN+ EQA   +++T+FPE  SNNQ  R+LYYVG+++A QL+YT++++KL Q++RKAPA+    A GFRR V KL +IVQLL+G++PER  F+Q  LR++L PYL LT       AVR+G+L +F   ++ H A+FK D T+TLILRL HNVIKTGLRKIS SYSRI   +I  KL L+   +AEFVCAKAI DGVIDAV+DHE G+LQ ++  ++Y+T +PQ AF +RITFCLDVHNEAVK++RYP  P    K+     EE+ E EK EEEL + + ++M++
Sbjct:   32 EELKRAITLLETVVKTNAKEKISRILRTTSKLRKTLSVAQLQQAVEQLLPSQNVSKPVLLALLAKIE-------TKAQAAASEARANVTKDQDVEMTDASSPEVEATTSA-PTAVVLPVVDLIEVEIYLFLYVLAALMKYKLAQEALNTVDKVVDRCQQFNRRTLDLFQAKVFTYYSNIHEQFGHDLAAIRNTLLGAHRTACLRYDEAGQATLINLLLRNYLKDNMYEQAYKFVSKTTFPESVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPAN---TAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNVGLLNEAVRVGNLEDFNVVLSQHGAVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALENAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYP--PD-AYKKDLESAEERLEREKQEEELAKVIEDEMDE 523          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|1173942967|gb|OQR91890.1| (26S proteasome non-ATPase regulatory subunit 3 [Achlya hypogyna])

HSP 1 Score: 414.846 bits (1065), Expect = 8.375e-137
Identity = 238/504 (47.22%), Postives = 325/504 (64.48%), Query Frame = 0
Query:   62 TTLDGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILA----DLPDD-PLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQ-GEEKGEEEKTEEELVQELGEDMED 559
            T    LKKNVTL++  V ++Q   + RV R     RR L P+ L+ A++  L +D  +++  L  +A    D  DD  +      PA        + + M++ E                    L E  TYL LLV+   ++     +A + A  +     + NRRTLD  AA+   Y A   ER  +    +RPL +A HRTACL  DE+GQATLLNLLLR+ L +NL +QA  L+++T+FPE  SNNQ  R+LYYVG++ A QL+YTD+++KL Q++RKAP +    A+GFRR V KL +IVQLL+G++PER+ F+QP L+ +L PYL LT AVR+G+L +F   +T  A +FK DKTHTLILRL HNVIKTGLRKI+ SYS+I  ++I  KL LD P +AEFVCAKAI DGVIDAV+DH+ G++QS++  D+Y+T EPQQAFHKRITFCLDVHNEAVK++RYP     GA + D +  EE+ E EK E+EL +E+ E++++
Sbjct:    3 TAWKELKKNVTLIEKVVASNQKEKLARVFRTTAVVRRGLTPAELTRALTEILAEDNEIRSTLLKYVALVKPDAADDVDMNAGEDDPAVG-DVEQDANIHMERSE--------------------LIEVETYLSLLVIALLLKAQLGAEAQACANLVRERCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLAAHRTACLRCDEIGQATLLNLLLRNYLHENLYDQAYKLVSKTTFPETVSNNQFVRYLYYVGKIHAVQLEYTDSYTKLMQSIRKAPQN---TAIGFRRTVYKLAIIVQLLMGEVPERSIFNQPELKTALLPYLQLTNAVRVGNLEDFTAVLTQFADVFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICTKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETVDVYATTEPQQAFHKRITFCLDVHNEAVKAMRYPP----GAYKKDLESAEERLEREKQEDELAKEIEEELDE 478          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|698786272|ref|XP_009826168.1| (hypothetical protein H257_03673 [Aphanomyces astaci] >gi|574118996|gb|ETV84476.1| hypothetical protein H257_03673 [Aphanomyces astaci])

HSP 1 Score: 412.92 bits (1060), Expect = 4.118e-136
Identity = 230/499 (46.09%), Postives = 321/499 (64.33%), Query Frame = 0
Query:   62 TTLDGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLPETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQ-GEEKGEEEKTEEELVQELGEDMED 559
            TT   LKKN+++++ AV  +Q   + RV R  T  RR L    L  AI+  L +D   ++L +  ++ +  D           + P  +    +++KD+                    L E   YL LLV++   +     ++ ++  A+     + NRR+LD  A++   Y A   ER   + A +RP+ +A HRTACL  DE+GQ+TLLNLLLR+ L +NL +QA  L+++T+FPE  SNNQ  R+LYYVG++ A QLDYTD+++KL Q++RKAP +    A+GFRR V KL +IVQLL+G++PER+ F+Q   + +L+PYL LT AVRLG+L +F   +T HA  FK DKT+TLILRL HNVIKTGLRKI+ SYS+I   +I  KL LD P +AEFV AKAI DGVIDAV+DH+ G++QS++  D+Y T EPQQAFHKRITFCLDVHNEAVK++RYP  P  GA + D +  EE+ E EK EEEL +E+ ++++D
Sbjct:    3 TTWKELKKNLSVIEKAVNANQKEKLARVFRTTTAVRRGLSAVELKRAIAEVLAEDNESRSLLIKYVSLVKPDESDDVDMNAGETDPVVN----DVEKDDHLDRSD--------------LIEVEIYLSLLVISKLFKAQLGRESQALTDAVRVRSAQFNRRSLDIFASRALTYYAYAHERFGNNYAGIRPVLLAAHRTACLRSDEIGQSTLLNLLLRNYLHENLYDQAFKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLDYTDSYTKLMQSIRKAPQN---TAVGFRRTVHKLAIIVQLLMGEVPERSIFNQDEFQVALEPYLKLTNAVRLGNLEDFTTVLTHHAETFKTDKTYTLILRLRHNVIKTGLRKINTSYSKIRFTDICAKLALDTPQNAEFVVAKAIKDGVIDAVIDHKNGWMQSKETVDVYVTNEPQQAFHKRITFCLDVHNEAVKAMRYP--P--GAYKKDLESAEERLEREKQEEELAKEIEDELDD 476          
BLAST of EWM24327.1 vs. NCBI_GenBank
Match: gi|695444225|ref|XP_009533913.1| (hypothetical protein PHYSODRAFT_361753 [Phytophthora sojae] >gi|348671347|gb|EGZ11168.1| hypothetical protein PHYSODRAFT_361753 [Phytophthora sojae])

HSP 1 Score: 414.461 bits (1064), Expect = 5.028e-136
Identity = 228/500 (45.60%), Postives = 312/500 (62.40%), Query Frame = 0
Query:   65 DGLKKNVTLLQTAVQTSQLRLINRVLRNNTPFRRNLRPSILSEAISYYLPQDEPLKALGLAILADLPDDPLPPPPPPPASSLPSTSSSTMEMDKDEKSGSPSQASAGKKAFPAPLFLP-----ETTTYLLLLVLTTAMRLHRLEQAHSVATALLPYLRKQNRRTLDALAAKGYFYLALTQERRSQSLAPLRPLFVALHRTACLHHDEMGQATLLNLLLRSLLADNLIEQAGNLIARTSFPEHASNNQLCRFLYYVGRVRATQLDYTDAFSKLNQAVRKAPADEGRAALGFRREVTKLLVIVQLLLGDIPERATFDQPVLRRSLQPYLALTTAVRLGDLLEFEKTVTAHAAMFKKDKTHTLILRLGHNVIKTGLRKISLSYSRISLAEIAGKLHLDGPASAEFVCAKAINDGVIDAVLDHEAGYLQSRDVNDIYSTMEPQQAFHKRITFCLDVHNEAVKSLRYPDVPTYGAKRGDGQGEEKGEEEKTEEELVQELGEDMED 559
            + LK+ V LL+TAV+T+    + RVLR  +  R+ L  + L +A+   LP     K    A+LA L             +   +     +EM       SP   +A   A PA + LP     E   YL L VL   ++    ++A       +   ++ NRRTLD L AK + Y +   E+    L  +R   +  HRT+CL +DE GQATL+NLLLR+ L DNL EQA   +++T+FPE  SNNQ  R+LYYVG+++A QL+YT++++KL Q++RKAPA+    A GFRR V KL +IVQLL+G++PER  F+Q  LR++L PYL LT AVR+G+L +F   +  H  +FK D T+TLILRL HNVIKTGLRKIS SYSRI   +I  KL L+   +AEFVCAKAI DGVIDAV+DHE G+LQ ++  ++Y+T +PQ AF +RITFCLDVHNEAVK++RYP  P    K+     EE+ E EK EEEL +E+ ++M++
Sbjct:   32 EELKRTVALLETAVKTNAKEKLPRVLRATSKLRKTLSVAQLQQAVEQLLPSQNASKP---ALLALLAKIDAKAQAAAADARAAAAKDQDVEM----TDASPEAETA---ASPATVVLPVVDLIEVEIYLFLYVLAALVKYKLAQEALDTVDKAVARCQQFNRRTLDLLQAKVFTYYSNIHEQFGHDLPAIRATLLGAHRTSCLRYDEAGQATLINLLLRNYLKDNLYEQAYKFVSKTTFPETVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPAN---TAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLAQHGPVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALENAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYP--PD-AYKKDLESAEERLEREKQEEELAKEIEDEMDE 515          
The following BLAST results are available for this feature:
BLAST of EWM24327.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105719|gb|EWM24327.1|0.000e+0100.0026s proteasome non-atpase regulatory subunit 3 [Na... [more]
gi|567967999|gb|ETK93153.1|5.291e-14545.80hypothetical protein L915_03600 [Phytophthora para... [more]
gi|566030398|gb|ETI53309.1|9.501e-14545.80hypothetical protein F443_03708 [Phytophthora para... [more]
gi|675184059|ref|XP_008900914.1|6.984e-14445.60hypothetical protein PPTG_08551 [Phytophthora para... [more]
gi|669136528|ref|XP_008603832.1|8.306e-14046.76hypothetical protein SDRG_00145 [Saprolegnia dicli... [more]
gi|970658937|gb|KUF96643.1|3.126e-13946.12FK506-binding protein 1 [Phytophthora nicotianae][more]
gi|301095603|ref|XP_002896901.1|1.684e-13844.8626S proteasome non-ATPase regulatory subunit 3 [Ph... [more]
gi|1173942967|gb|OQR91890.1|8.375e-13747.2226S proteasome non-ATPase regulatory subunit 3 [Ac... [more]
gi|698786272|ref|XP_009826168.1|4.118e-13646.09hypothetical protein H257_03673 [Aphanomyces astac... [more]
gi|695444225|ref|XP_009533913.1|5.028e-13645.60hypothetical protein PHYSODRAFT_361753 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6361rna6361Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications