EWM24312.1, cds6345 (CDS) Nannochloropsis gaditana

Overview
NameEWM24312.1
Unique Namecds6345
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:344863..345612 +
Alignment locationCM002468.1:345818..346387 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24312.1
Productchaperone protein
Orig transcript idgnl|cribi|Naga_100047g4.6075.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:344863..345612 +
CM002468.1supercontigCM002468.1:345818..346387 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006950response to stress
GO:0009628response to abiotic stimulus
GO:0009408response to heat
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0051082unfolded protein binding
GO:0031072heat shock protein binding
Vocabulary: INTERPRO
TermDefinition
IPR008971HSP40/DnaJ_pept-bd
IPR018253DnaJ_domain_CS
IPR012724DnaJ
IPR002939DnaJ_C
IPR001305HSP_DnaJ_Cys-rich_dom
IPR001623DnaJ_domain
Homology
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|585105704|gb|EWM24312.1| (chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 878.626 bits (2269), Expect = 0.000e+0
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0
Query:    1 MRRHQPLVGSRRQRQGGRVYFSFFFFLVVALCTLDCFNCSHRALAFVFSPFRVSLKPLSSAQKPFTSPLGSTSPLLRPSTRLFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKLMGGEGGGGVTTTSPCRWRSP 439
            MRRHQPLVGSRRQRQGGRVYFSFFFFLVVALCTLDCFNCSHRALAFVFSPFRVSLKPLSSAQKPFTSPLGSTSPLLRPSTRLFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKLMGGEGGGGVTTTSPCRWRSP
Sbjct:    1 MRRHQPLVGSRRQRQGGRVYFSFFFFLVVALCTLDCFNCSHRALAFVFSPFRVSLKPLSSAQKPFTSPLGSTSPLLRPSTRLFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKLMGGEGGGGVTTTSPCRWRSP 439          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|1210513424|dbj|GAX27821.1| (molecular chaperone DnaJ [Fistulifera solaris])

HSP 1 Score: 384.415 bits (986), Expect = 2.903e-127
Identity = 210/365 (57.53%), Postives = 252/365 (69.04%), Query Frame = 0
Query:   62 QKPFTSPLGSTSPLLRP-STRLFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGV------KRGAGSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            Q+P+T    ST+   R  STR   S+  RD+Y  LGV+R+A    IK+AYRKLA +YHPD    +D +EKF+ I  AYE L D   +Q YD FGE G+         AGSPFGGGG     EVDLGDIF+TFFGG G    GG    A      R  GP  GDDLR DL I  +T+VFGG++K++I H+ETC TC G+GVKPG+K++TC TC G G+  QVTRTPLGNFQTQ  CP C G+GQ VEEYCGSC GQG  +KTKQIKV +P GV +G KLRV+GEGDAG  GG +GDLYIF+ V+ DPVFRREG +IYSE K+SYLDAILG  +K  V+DGE  I +  GTQPG V+RLKG G P+L
Sbjct:   33 QEPYTHHAPSTTSTTRLFSTRNRNSTNNRDFYAILGVSRNADAAQIKQAYRKLAKQYHPDANPGQDTTEKFQEINRAYEVLTDPNLKQKYDMFGEQGIGTSAASDSTAGSPFGGGGFT--QEVDLGDIFDTFFGGGGASGFGGGRRTA------RQRGPVIGDDLRFDLEIDFKTAVFGGEQKVKIRHLETCDTCGGNGVKPGAKISTCNTCNGSGVTMQVTRTPLGNFQTQQTCPTCRGTGQRVEEYCGSCGGQGLNQKTKQIKVTVPPGVENGNKLRVRGEGDAGPNGGPAGDLYIFLKVKDDPVFRREGPEIYSEAKISYLDAILGASIKCPVVDGEVTIKVPAGTQPGQVMRLKGNGAPRL 389          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|219120919|ref|XP_002185691.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582540|gb|ACI65161.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 373.629 bits (958), Expect = 7.312e-123
Identity = 216/387 (55.81%), Postives = 260/387 (67.18%), Query Frame = 0
Query:   45 AFVFSPFRVSLKPLS-SAQKPFTS---PLGSTSPLLRPSTRLFAS---SLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGA-----GSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            AFV S +  S  P+   A  PF +      S SP  + S RLF S   S  RD+Y  LGV R A +  IK AYRKLA +YHPD     D +EKF+ +  AYE L D   +Q YD+FGE G+   A     GSPFGG GG G  EVDLGDIF++FFGG   G GG  G         R +GP  GDDLR DL +  +T+VFGG+EK+RI H+ETC TC+GSGVKPGSKV+ C  C G G+  QVTRTPLGNFQTQ  C  C G+G+ V+EYCG+C GQG  +KTKQIKV +PAGV DG KLRV+GEGD+G KGG +GDLYIF+ V++DP FRREG++IYS+  VSYLDAILG  +K  V+DGE  I I  GTQPG V+RLKG G P+L
Sbjct:   21 AFVPSSWTPSRNPVQKDAASPFVTMSRSRASQSPFHQTS-RLFMSTRNSTERDFYAILGVGRLADKAAIKAAYRKLAKQYHPDANPGVDTTEKFQELNRAYEVLTDPVLKQKYDRFGERGLGTSAASDAEGSPFGGAGGRG-QEVDLGDIFDSFFGGGSSGMGGRNGP--------RRSGPIVGDDLRFDLQVDFKTAVFGGEEKVRIRHLETCDTCTGSGVKPGSKVSMCTLCNGSGVTVQVTRTPLGNFQTQQTCATCRGTGERVDEYCGTCGGQGVNQKTKQIKVTVPAGVEDGNKLRVRGEGDSGPKGGPAGDLYIFLKVKEDPTFRREGSEIYSDTTVSYLDAILGASIKTPVVDGEVTIKIPAGTQPGQVMRLKGNGAPRL 397          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|397591429|gb|EJK55367.1| (hypothetical protein THAOC_24912 [Thalassiosira oceanica])

HSP 1 Score: 372.474 bits (955), Expect = 1.799e-122
Identity = 223/394 (56.60%), Postives = 263/394 (66.75%), Query Frame = 0
Query:   39 CSHRALAFVFSPFRVSLKPLSSAQKPFTSPLGST---SPLLRPSTRLFASSLP--RDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGG-------GGAGFN-EVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            C+   +AF  SP  V   P  +   P    L +T          T L  SS P  RD+Y  LGV+RSA + +IK AYRKLA KYHPD    +D + +F+ +   YE L DD+KR+ YD FGEAGV   A S  GG        GGAGF+ EVDLGDIF+TFFGG  GG GG   GG      RRA     GDDLR DL I  +T+VFGG+EK+RI H+ETC TC G+GVKPGSKV+TC TC G G+  QVTRTPLGNFQTQ  CP+C G+GQ VEEYCG+CSG+G + KTKQIKVDIP GV DG KLRV+GEGDAG  GG +GDLYIF+ V+ DP FRREG +IYSE  VSY+DAILG  VKV V+DG+  I +  GTQP  V+RLKG G P L
Sbjct:   13 CATSTVAF--SPAGVISSPCPTGATPIIRALTNTPSSRTASSSRTALNMSSRPGGRDFYSILGVSRSADKSEIKSAYRKLAKKYHPDANPNKDTTAEFQEVNRVYEVLGDDEKRKKYDMFGEAGVGSSAASEGGGPYGYGSPFGGAGFSQEVDLGDIFDTFFGGGPGGPGGAGFGGGRGRGGRRAGP-MAGDDLRFDLEIDFKTAVFGGEEKVRIRHLETCDTCGGNGVKPGSKVSTCSTCNGMGVTMQVTRTPLGNFQTQQTCPDCRGTGQKVEEYCGTCSGEGNVSKTKQIKVDIPPGVEDGNKLRVRGEGDAGPSGGPAGDLYIFLKVKPDPNFRREGPEIYSEATVSYVDAILGASVKVPVVDGDVTIKVPPGTQPEQVMRLKGNGAPVL 403          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|1210528741|dbj|GAX12611.1| (molecular chaperone DnaJ [Fistulifera solaris])

HSP 1 Score: 369.777 bits (948), Expect = 1.551e-121
Identity = 203/363 (55.92%), Postives = 247/363 (68.04%), Query Frame = 0
Query:   62 QKPFTSPLGSTSPLLRP-STRLFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGF----NEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
             +P+T  + S++   R  STR   S+  RD+Y  LGV+R+A    IK+AYRKLA +YHPD    +D +EKF+ I  AYE L D   +Q YD FGE G+   A S    G   G      EVDLGDIF++FFGG G    GG    A      R  GP  GDDLR DL I  +T+VFGG+EK+RI H+ETC TC G+GVKPG+K++TC TC G G+  QVTRTPLGNFQTQ  CP C G+GQ VEEYCG+C GQG  +KTKQIKV +P GV +G KLRV+GEGDAG  GG +GDLYIF+ V+ DPVFRREG +IYSE K+SYLDAILG  +K  V+DGE  I +  GTQPG V+RLKG G P+L
Sbjct:   33 HEPYTHDVKSSTTTTRLFSTRNRNSTNNRDFYAILGVSRNADAAQIKQAYRKLAKQYHPDANPGQDTTEKFQEINRAYEVLTDPSLKQKYDMFGEQGIGTSAASDSTAGSPFGGGGFSQEVDLGDIFDSFFGGGGSSGFGGGRRTA------RQRGPVIGDDLRFDLEIDFKTAVFGGEEKVRIRHLETCDTCGGNGVKPGAKISTCNTCNGSGVTMQVTRTPLGNFQTQQTCPTCRGTGQRVEEYCGTCGGQGLNQKTKQIKVTVPPGVENGNKLRVRGEGDAGPNGGPAGDLYIFLKVKDDPVFRREGPEIYSEAKISYLDAILGASIKCPVVDGEVTIKVPAGTQPGQVMRLKGNGAPRL 389          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|545708789|ref|XP_005706706.1| (molecular chaperone DnaJ [Galdieria sulphuraria] >gi|452823173|gb|EME30186.1| molecular chaperone DnaJ [Galdieria sulphuraria])

HSP 1 Score: 360.533 bits (924), Expect = 2.399e-117
Identity = 203/378 (53.70%), Postives = 249/378 (65.87%), Query Frame = 0
Query:   65 FTSPLGSTSPLLRPSTRLFASSL----------------PRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGS-------PFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            F S    T    RP++  F+S+                   DYY  LGV+R+A  EDIKKA+RKLA +YHPDV KE DA +KF+ I EAYE L D Q R  YDQFG AGVK GAG+        FG  G  G       DIFETFFGG            +   +RRR +GP+ G+DLR+DL I    +VFGGQ+K++I+H+ETC TCSGSG+KPGSK   C TC GQGMV QV RTPLG FQ  S CP C G+GQVVE+YC SCSGQGR + TKQ+ ++IP GV++G +LRV+ EGDAG +GG SGDLY+F+ V     FRREG DIYS ++VSYLDAILGT+V V  +DG  ++ I  GTQPGAVL++ G+GVPKL
Sbjct:   53 FYSHFYGTKSFCRPASFRFSSTHIDNNQYTDFLESIRCEEEDYYNVLGVSRNASTEDIKKAFRKLARRYHPDVNKEPDAKQKFQKISEAYEVLSDPQMRSRYDQFGMAGVKAGAGAGAASGFADFGDFGDFG----AFSDIFETFFGGGATS--------SRSSSRRRRSGPQQGEDLRLDLEIDFEKAVFGGQQKIKISHLETCTTCSGSGIKPGSKEKVCSTCGGQGMVMQVARTPLGTFQQTSTCPSCNGAGQVVEDYCPSCSGQGRRQTTKQLVINIPPGVDNGSRLRVRNEGDAGLRGGPSGDLYVFLKVANHKTFRREGMDIYSTLEVSYLDAILGTRVVVATVDGNVQVDIPPGTQPGAVLKIAGKGVPKL 418          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|223993205|ref|XP_002286286.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977601|gb|EED95927.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 352.058 bits (902), Expect = 2.228e-114
Identity = 200/347 (57.64%), Postives = 239/347 (68.88%), Query Frame = 0
Query:   82 LFASSLPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGF--------NEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGP-RPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            + + S  RD+Y  LGV+RSA + +IK AYRKLA + HPD    +D +++F+ I  AYE L D+ KR+ YD FGEAGV   A S  GG  G G          EVDLGDIF+TFFGG GG  G G G   G GAR         GDDLR DL +  + +VFGG+EK+RI H+ETCGTC+GSGVKPG+KVNTC TC G G+  QVTRTPLGNFQTQ  C  C G+GQ +EEYCG+CSG G + KTKQIKVDIP GV DG KLRV+ EGDAG  GG +GDLYIF+ V+ DP FRREG +IYS+  +SY+DAILG   KV V+DGE  I +  GTQP  V+RLKG G P L
Sbjct:   58 MSSRSPSRDFYSMLGVSRSADKAEIKSAYRKLAKQLHPDANPNKDTTQEFQDINRAYEVLSDEDKRKKYDMFGEAGVGSSAASEGGGPYGYGSPFGGGGFSQEVDLGDIFDTFFGGGGGPGGPGAGFAGGRGARGGRRSGPMAGDDLRFDLELDFKKAVFGGEEKVRIRHLETCGTCTGSGVKPGAKVNTCSTCNGVGVTMQVTRTPLGNFQTQQTCASCRGTGQKIEEYCGTCSGDGTVSKTKQIKVDIPPGVEDGNKLRVRSEGDAGPNGGPAGDLYIFLKVKADPNFRREGPEIYSDATISYVDAILGASKKVPVVDGEVTIKVPPGTQPEQVMRLKGNGAPVL 404          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|546299656|ref|XP_005710882.1| (unnamed protein product [Chondrus crispus] >gi|507107042|emb|CDF40588.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 351.288 bits (900), Expect = 3.352e-114
Identity = 175/330 (53.03%), Postives = 227/330 (68.79%), Query Frame = 0
Query:   90 DYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            DYY+ LGV+RSA   +IK A+R+ A K HPDV K  DA E+F+ +  AYE L D   RQ YDQFGEAGVK GA S   G    G +     DIF+TFFGG        +GG  G  +RRRA GP+PGDDLR+D+ +P   +VFG ++K+R +H+E+CGTC GSGVKPG+K  +C  C G G  TQV RTPLG FQ    C  C G+G+VV+EYC SC G+GR + TKQ+ + IPAGV+ G +LRV+GEGDAG +GG  GDLY+ + V     F R+G++IYS++ VSYLDAILG  + V  +DG  ++++  GTQPGAVLR+ G+GVPK+
Sbjct:   56 DYYQTLGVSRSASDAEIKSAFRQKARKLHPDVNKAADAKERFQEVSRAYEILSDSSLRQRYDQFGEAGVKSGAASQGQGFADFGQDFGSFSDIFDTFFGG--------QGGATGQRSRRRA-GPQPGDDLRLDVDVPFDRAVFGAEQKIRFSHLESCGTCEGSGVKPGTKPRSCSACDGTGTATQVVRTPLGMFQQTGSCTTCRGTGEVVDEYCSSCGGRGRNQTTKQLMITIPAGVDTGSRLRVRGEGDAGPRGGPPGDLYVMLRVTDSKDFTRDGSNIYSKVNVSYLDAILGRNIMVKTVDGNEDVTLGAGTQPGAVLRITGKGVPKI 376          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|571030914|ref|WP_024125711.1| (molecular chaperone DnaJ [Thermosynechococcus sp. NK55a] >gi|564738935|gb|AHB89333.1| chaperone protein DnaJ [Thermosynechococcus sp. NK55a])

HSP 1 Score: 347.821 bits (891), Expect = 9.355e-114
Identity = 180/339 (53.10%), Postives = 230/339 (67.85%), Query Frame = 0
Query:   87 LPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGFNEVDLGD------IFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            + RD+YE LGV+RSA  E++K+AYR+LA KYHPDV KE  A EKFK I  AYE L D Q R  YD+FGEAGV         G G AGF++  +GD      IFETFFGG   G              RR  GP  GDDLR DL +  R +VFGG++++RINH+ETC TC G+G KPG++  TC TC G G V +  RTP G+F   + CP CGGSG V+E+ C SC GQG ++ +K++K+ IPAGV++G +LRV GEGDAG +GG  GDLY+++ V+ DP F+REG +I S IK+SYL AILG ++ V  +DGEAE+ I  GTQPG VL L+GRGVP++
Sbjct:    1 MARDFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYDRFGEAGVS--------GVGAAGFSDFGIGDMGGFADIFETFFGGFATGS-------------RRQQGPTRGDDLRYDLKLEFREAVFGGEKEIRINHLETCKTCQGTGAKPGTRPVTCSTCGGIGQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVSKKLKITIPAGVDNGTRLRVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKISYLQAILGCRIPVSTVDGEAELKIPAGTQPGTVLVLEGRGVPRV 318          
BLAST of EWM24312.1 vs. NCBI_GenBank
Match: gi|501597042|ref|WP_012597970.1| (molecular chaperone DnaJ [Cyanothece sp. PCC 7424] >gi|226735557|sp|B7KEJ8.1|DNAJ_CYAP7 RecName: Full=Chaperone protein DnaJ >gi|218170290|gb|ACK69023.1| chaperone protein DnaJ [Cyanothece sp. PCC 7424])

HSP 1 Score: 346.28 bits (887), Expect = 3.160e-113
Identity = 180/333 (54.05%), Postives = 225/333 (67.57%), Query Frame = 0
Query:   87 LPRDYYERLGVTRSAKREDIKKAYRKLALKYHPDVCKEEDASEKFKGIKEAYEALIDDQKRQLYDQFGEAGVKRGAGSPFGGGGGAGFNEVDLGDIFETFFGGAGGGRGGGRGGGAGPGARRRAAGPRPGDDLRVDLSIPLRTSVFGGQEKLRINHMETCGTCSGSGVKPGSKVNTCKTCRGQGMVTQVTRTPLGNFQTQSVCPECGGSGQVVEEYCGSCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGSKGGESGDLYIFVGVEKDPVFRREGTDIYSEIKVSYLDAILGTKVKVGVIDGEAEISIKEGTQPGAVLRLKGRGVPKL 419
            +P DYYE LGV+R A +++IK+AYR+LA KYHPDV KE  A E+FK I  AYE L + + R  YD+FGEAGV  GAGS F  G   G     + DIFET F G GG        G G  +RRR  GP  GDDLR+D  +  R +VFGG++++RI H+ETC  C GSG KPG+   TC TC G G V + TRTP G F   SVCP C GSG+V+EE C +C G GR ++TK++K+ IPAGV++G +LRV  EGDAG +GG  GDLY+++ VE D  F+REG DI SEI +SYL AILG ++ V  +DG  EI+I+ GTQP  VL L  RGVPKL
Sbjct:    1 MPGDYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYDRFGEAGVSSGAGSGFEYGDMGG-----IADIFETIFSGFGGM-------GTGTSSRRRT-GPVRGDDLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSGQVRRATRTPFGTFAQVSVCPTCNGSGEVIEEKCEACGGSGRKQETKKLKITIPAGVDNGTRLRVSREGDAGQRGGPPGDLYVYLSVETDEEFQREGIDIKSEISISYLQAILGCRLSVNTVDGPEEITIEPGTQPNTVLTLPNRGVPKL 320          
The following BLAST results are available for this feature:
BLAST of EWM24312.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105704|gb|EWM24312.1|0.000e+0100.00chaperone protein [Nannochloropsis gaditana][more]
gi|1210513424|dbj|GAX27821.1|2.903e-12757.53molecular chaperone DnaJ [Fistulifera solaris][more]
gi|219120919|ref|XP_002185691.1|7.312e-12355.81predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397591429|gb|EJK55367.1|1.799e-12256.60hypothetical protein THAOC_24912 [Thalassiosira oc... [more]
gi|1210528741|dbj|GAX12611.1|1.551e-12155.92molecular chaperone DnaJ [Fistulifera solaris][more]
gi|545708789|ref|XP_005706706.1|2.399e-11753.70molecular chaperone DnaJ [Galdieria sulphuraria] >... [more]
gi|223993205|ref|XP_002286286.1|2.228e-11457.64predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|546299656|ref|XP_005710882.1|3.352e-11453.03unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|571030914|ref|WP_024125711.1|9.355e-11453.10molecular chaperone DnaJ [Thermosynechococcus sp. ... [more]
gi|501597042|ref|WP_012597970.1|3.160e-11354.05molecular chaperone DnaJ [Cyanothece sp. PCC 7424]... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6360rna6360Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications