EWM24332.1, cds6340 (CDS) Nannochloropsis gaditana

Overview
NameEWM24332.1
Unique Namecds6340
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:329187..329839 +
Alignment locationCM002468.1:330027..330152 +
Alignment locationCM002468.1:330265..330440 +
Alignment locationCM002468.1:330542..331611 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24332.1
Productabc transporter related protein
Orig transcript idgnl|cribi|Naga_100105g3.10571.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:329187..329839 +
CM002468.1supercontigCM002468.1:330027..330152 +
CM002468.1supercontigCM002468.1:330265..330440 +
CM002468.1supercontigCM002468.1:330542..331611 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|585105726|gb|EWM24332.1| (abc transporter related protein [Nannochloropsis gaditana])

HSP 1 Score: 1363.98 bits (3529), Expect = 0.000e+0
Identity = 674/674 (100.00%), Postives = 674/674 (100.00%), Query Frame = 0
Query:    1 MAACRIPTRGRCHISWTGTALSSACTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGGGRRGESDSV 674
            MAACRIPTRGRCHISWTGTALSSACTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGGGRRGESDSV
Sbjct:    1 MAACRIPTRGRCHISWTGTALSSACTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGGGRRGESDSV 674          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|553179709|ref|XP_005852749.1| (hypothetical protein NGA_0699900, partial [Nannochloropsis gaditana CCMP526] >gi|422295786|gb|EKU23085.1| hypothetical protein NGA_0699900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 395.586 bits (1015), Expect = 6.739e-131
Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0
Query:   25 CTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLST 227
            CTGNKRFATSQTDAAKWRQIY QKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFA GKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMM MEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPL  + +  + T
Sbjct:    1 CTGNKRFATSQTDAAKWRQIYGQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFAGGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMGMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLCIRILRKIIT 203          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|553192499|ref|XP_005855583.1| (atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526] >gi|422293475|gb|EKU20775.1| atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 312.768 bits (800), Expect = 3.624e-100
Identity = 160/187 (85.56%), Postives = 161/187 (86.10%), Query Frame = 0
Query:  132 MSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEI 318
            M MEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSP                         QLCQGFPRLLVDLGLARRS+PRTSMVLVTHRREEVPQEVGRLVSVDGFEI
Sbjct:    1 MGMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSP-------------------------QLCQGFPRLLVDLGLARRSIPRTSMVLVTHRREEVPQEVGRLVSVDGFEI 162          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|974627088|ref|WP_059214663.1| (molybdate ABC transporter ATP-binding protein ModF [Escherichia albertii])

HSP 1 Score: 160.999 bits (406), Expect = 4.558e-39
Identity = 165/558 (29.57%), Postives = 238/558 (42.65%), Query Frame = 0
Query:   96 VLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMED-----TEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEV---GRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQT----VLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLL----ERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISS-LYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLEL 636
            +L  GD    +G NG+GKS   +AL G   +L     S+       + E  Q   + + +   T     +++ AG+ T                       ++ D +  +     R+L  Q G+  L  +R   LSTGE RK LL   L  +P +L+LD+PFDGLD  SR+ L  +L+ L Q         GL        ++VLV +R +E+P+ V   G LV     EI   GA E         L  A +  L  +  +L   Q+P +     P AR  L      ++L +GV  +  +  +LN +SW+V  GE W + G NGAGKSTL  L+     + +  DL    RR G G      +                  HIG VS+ LHL    + +      V+LSG     S G+    S                             R   L+++W DILGI+      PF  LS GQQ+L +I RAL+  P LLI DE  QGLD  +R LI   +  +     +   LL++SHH ++A P   +H LE 
Sbjct:   25 MLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSLFSHITRLSFEQLQKLISDEWQRNNTDMLGPDEDDAGRTTAE---------------------IIQDTVKDAER--CRQLAQQFGITSLLNRRFKYLSTGETRKALLCQALMSAPDLLILDEPFDGLDVASRQQLAELLASLHQA--------GL--------TLVLVLNRFDEIPEFVQFAGVLVDCTLTEI---GAKEG-------LLQQALIAQLAHS-EQLDGVQLPES---DEPSARHGLPASEPRIVLNNGV-VSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIK-----------------KHIGYVSSNLHLDYRVSTT---VRNVILSGY--FDSIGIYQAVSD----------------------------RQQKLVQQWLDILGINKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGET--QLLFVSHHAEDA-PACITHRLEF 475          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|524822570|emb|CDF14456.1| (uncharacterized protein BN821_02136 [Bacteroides sp. CAG:98])

HSP 1 Score: 159.458 bits (402), Expect = 1.395e-38
Identity = 151/543 (27.81%), Postives = 241/543 (44.38%), Query Frame = 0
Query:  100 GDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDP-LARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRAL--GPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
            G+H+ ++G NGAGKS+    + G   +L      M + +  F  + +K   +       A ++  G A G     +     + H L   +  VV D+L  +++P L + L     +  +  K + +LS+GE+RK  L  TL  +PRVL++D PF GLDA +R  LH +L +L +               +    ++LV  + +++P  +  ++ V       E  M   ++ +L+A   G  P+P   R L K    +  R   L       +   V+  + V    GE  +L  + W VK GE WAL G NG+GKSTL  L+        +  +  A      GR  G      +++        HIG VS E+H    A     PA  +V SGL    S G+                  +P  E++E              + W DI GI+ L    F +LS G+Q+LV++ARA +  P LLI DE   GLD  +R L+  ++ T  +      T++ ++H++DE LP   +  L L+R 
Sbjct:   30 GEHIAIVGPNGAGKSILVDTIIGRWPLL------MNEVKYDFSPSPSKM--VYDNIKYIAFRDSYGDADGN---YYYQQRWNTHDLD--ETPVVRDLLPKATNPELKKTLYDLFDIETMLDKHIILLSSGELRKFQLTKTLLSNPRVLIMDNPFIGLDAKTRDQLHALLCELIR---------------MTCLQIILVLSKTDDIPSLITHVIPV-------ENRMCGDKI-TLKAYLAGCKPVPE--RVLSK---EKEERILALPYGDGFYHTDHVVDLNKVSIRYGERTILKELDWSVKCGEKWALSGDNGSGKSTLLSLVCA------DNPQSYACDITLFGRKRGSGESIWEIK-------KHIGYVSPEMH---RAYLKNLPAIDIVASGLH--DSVGL----------------YKRPRPEQMET------------CEWWMDIFGIADLKERSFLQLSSGEQRLVLLARAFVKDPELLILDEPLHGLDLINRRLVKDIIETFCRRRDK--TMIMVTHYKDE-LPMCITGSLHLKRN 482          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|492728826|ref|WP_005937752.1| (hypothetical protein [Bacteroides massiliensis] >gi|482608703|gb|EOA56760.1| hypothetical protein HMPREF1534_00950 [Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223])

HSP 1 Score: 159.073 bits (401), Expect = 1.711e-38
Identity = 151/543 (27.81%), Postives = 241/543 (44.38%), Query Frame = 0
Query:  100 GDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDP-LARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRAL--GPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
            G+H+ ++G NGAGKS+    + G   +L      M + +  F  + +K   +       A ++  G A G     +     + H L   +  VV D+L  +++P L + L     +  +  K + +LS+GE+RK  L  TL  +PRVL++D PF GLDA +R  LH +L +L +               +    ++LV  + +++P  +  ++ V       E  M   ++ +L+A   G  P+P   R L K    +  R   L       +   V+  + V    GE  +L  + W VK GE WAL G NG+GKSTL  L+        +  +  A      GR  G      +++        HIG VS E+H    A     PA  +V SGL    S G+                  +P  E++E              + W DI GI+ L    F +LS G+Q+LV++ARA +  P LLI DE   GLD  +R L+  ++ T  +      T++ ++H++DE LP   +  L L+R 
Sbjct:   30 GEHIAIVGPNGAGKSILVDTIIGRWPLL------MNEVKYDFSPSPSKM--VYDNIKYIAFRDSYGDADGN---YYYQQRWNTHDLD--ETPVVRDLLPKATNPELKKTLYDLFDIETMLDKHIILLSSGELRKFQLTKTLLSNPRVLIMDNPFIGLDAKTRDQLHALLCELIR---------------MTCLQVILVLSKTDDIPSLITHVIPV-------ENRMCGDKI-TLKAYLAGCKPVPE--RVLSK---EKEERILALPYGDGFYHTDHVVDLNKVSIRYGERTILKELDWSVKCGEKWALSGDNGSGKSTLLSLVCA------DNPQSYACDITLFGRKRGSGESIWEIK-------KHIGYVSPEMH---RAYLKNLPAIDIVASGLH--DSVGL----------------YKRPRPEQMET------------CEWWMDIFGIADLKERSFLQLSSGEQRLVLLARAFVKDPELLILDEPLHGLDLVNRRLVKDIIETFCRRRDK--TMIMVTHYKDE-LPMCITGSLHLKRN 482          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|551543598|ref|XP_005759949.1| (ABC transporter [Emiliania huxleyi CCMP1516] >gi|485608151|gb|EOD07520.1| ABC transporter [Emiliania huxleyi CCMP1516])

HSP 1 Score: 160.229 bits (404), Expect = 3.022e-38
Identity = 192/586 (32.76%), Postives = 258/586 (44.03%), Query Frame = 0
Query:   98 RFGDHVCVIGKNGAGKSLFCQALGG---HREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQ--------------RLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLL---------------LERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWN 651
            R G HV ++G NGAGK+L  +AL     HR +L  G ++  D                G G + A +              +SF  H   LA      V   LG    P AR L+V+ GL+PL Y+ V  +STGEIRKVLL   L  SPR LVLD  FDGLD  SR+SL  ++SQ+ +GF +LLV  G+  R+   T ++L+T R EEV  EV  + + DG       A E +              RL +      A +  L R  P     +   A++   P   E          ++  +GEH +L  + WRV   E W + G NGAGKSTL+RLL               L R R  +EE  R  G+ G GG   G         G        +G VSTE HL +A   SE  A  +V  G          D  ++        VD      + L+RPF     R+L                       SQG+QK+V++A AL   P LL+ DE CQGLD         L       ++S + LLYI+HH +E LP VT HVL L+ G  ++ G  E ++
Sbjct:   82 RAGGHV-LLGANGAGKTLLTEALLEDPLHRTLLREGSLTCAD----------------GWGARSASR--------------VSFDAHQRLLADGGS--VYRALG-HLGPAARYLVVRFGLHPLLYRPVRAISTGEIRKVLLVRALGTSPRCLVLDNAFDGLDVASRQSLSELISQMLRGFGQLLVQ-GVDARATAHTQVLLLTQRAEEVVPEVATMSAFDGEGRLATSAREGRSGAELLADALAPAARLPARALPSEAEVAALWRGGPG---EEASAAASRGGPALVEA-------RSLQVRRGEHTILRGLDWRVGSDEHWLIAGGNGAGKSTLSRLLARAGAEPVAAGDFTVLGR-RARVEEAARGDGEEGGGGGGGGEDVGGGGGGGGDVAAAQGVGWVSTEAHLSVAG--SERTAGEMVAEG---------SDAEAARRVASWLGVD------DLLDRPF-----RML-----------------------SQGEQKVVLVAAALARRPALLVLDEPCQGLDLL--RRRRVLEVVQRVCSASRMRLLYITHHFEEVLPCVT-HVLHLKGGEATYRGPREGYD 573          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|1022657500|ref|WP_063414740.1| (molybdate ABC transporter ATP-binding protein ModF [Klebsiella aerogenes] >gi|1022061815|gb|KZR04606.1| molybdate ABC transporter ATP-binding protein ModF [[Enterobacter] aerogenes])

HSP 1 Score: 157.532 bits (397), Expect = 7.844e-38
Identity = 164/558 (29.39%), Postives = 234/558 (41.94%), Query Frame = 0
Query:   96 VLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQ-GADAKQERLEGTGCKEAEKEGAGKAT-GREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDP-LARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASL---RALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKAR----ENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLL----ERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISS-LYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELER 638
             LR G+    +G NG+GKS   +AL G   +L          E +FQ       E+L+     E ++      + G E               R    ++ D      DP    RL  QLG+  L  +R   LSTGE RK LL   L   P +L+LD+PFDGLD  SR+ L  +L+ L Q                   ++VLV +R +E+P+            IEY G +    L+ +   +AL    L        KL    +P      +P AR    EN   ++L DG   +  +  ++N +SW V  GE W + G NGAGKSTL  L+     + +  DL    RR G G      +                  HIG VS+ LHL+   + +      V+LSG     S G+    S               +H+ ++R               W DILGI       PF  LS GQQ+L +I RAL+  P LLI DE  QGLD  +R L+   +  +    ++   LL++SHH ++A P+  +H LE  R
Sbjct:   25 TLRAGESWAFVGSNGSGKSALARALAGELTLLNG------QRESTFQRTTRLSFEQLQKLVSDEWQRNNTDMLSPGEEDT------------GRTTAEIIED---EKRDPERCARLAEQLGISHLLSRRFKYLSTGETRKTLLCQALMSDPDLLILDEPFDGLDVASRQQLADLLASLHQ----------------DGITLVLVLNRFDEIPE-----------FIEYAGVLADCTLSEIGEKQALLQQALVAQLAHSEKLTGMTLPEP---DAPAARHDLAENAPLIILNDGT-VSYNDKAIINQLSWTVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIK-----------------KHIGYVSSSLHLEYRVSTN---VRNVILSGY--FDSIGIYQAVSD-------------KQHKLVQR---------------WLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLIGEGAT--QLLFVSHHAEDA-PDCITHRLEFIR 477          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|1134261408|ref|WP_076502130.1| (ABC transporter [Shewanella morhuae])

HSP 1 Score: 157.532 bits (397), Expect = 9.582e-38
Identity = 136/446 (30.49%), Postives = 215/446 (48.21%), Query Frame = 0
Query:  208 LIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYR-PQVPRASTLSSPKA----------RENLQTVLLFDGVRYTKGEHV---LLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
            L+ ++GL  L  +   +LSTGE R+V+LA  L+  P++L+LD P+ GLD   + SL  +LS++ +                  T ++++T R+EE+P  +  +   +G E+   G        S+  L P      P T+ + ++ P + + + LS+ ++          R N +       ++  K E+V   + + V+WR++ G+ W ++G NG GKSTL  L+L       +  +  +      GR  G      Q++ R       IG+VS+ LHLQ   +CS   A  V+LSG     S G+    + P                             L L KEW  IL +S L ST F +L  GQQ+L++I RALI  P LLI DE  QGLD  +R+L+M  L  IA+   S   LLY+SHH ++ALP + + V  +++G
Sbjct:  118 LLQKVGLEHLRLRGFQLLSTGETRRVMLARALAILPQLLILDDPYAGLDIEHQTSLSELLSEVAE-----------------HTQLLIITSRQEELPPCISHVALFNG-EMLKSGQ-------SVHKLSP------PMTIEQWHKHPVMAQLNALSAQRSDELLALMERQRHNAEAFSPLVEIKNGKVEYVSGLIFSGVNWRIEAGQHWQVRGPNGCGKSTLLGLILG------DHPQCYSNDITLFGRPRGSGESIWQIKQR-------IGIVSSALHLQYRVSCS---ALDVLLSGF--FDSIGLYHKPTKPQ----------------------------LDLAKEWLTILHMSGLASTSFKKLDYGQQRLLLIGRALIKQPLLLILDEPYQGLDFINRSLVMRALEMIAEHHLS--QLLYVSHHREDALPAIHNFVDFIKQG 484          
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|1131882316|emb|SIR42485.1| (molybdate transport system ATP-binding protein [Shewanella morhuae])

HSP 1 Score: 157.532 bits (397), Expect = 1.102e-37
Identity = 136/446 (30.49%), Postives = 215/446 (48.21%), Query Frame = 0
Query:  208 LIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYR-PQVPRASTLSSPKA----------RENLQTVLLFDGVRYTKGEHV---LLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
            L+ ++GL  L  +   +LSTGE R+V+LA  L+  P++L+LD P+ GLD   + SL  +LS++ +                  T ++++T R+EE+P  +  +   +G E+   G        S+  L P      P T+ + ++ P + + + LS+ ++          R N +       ++  K E+V   + + V+WR++ G+ W ++G NG GKSTL  L+L       +  +  +      GR  G      Q++ R       IG+VS+ LHLQ   +CS   A  V+LSG     S G+    + P                             L L KEW  IL +S L ST F +L  GQQ+L++I RALI  P LLI DE  QGLD  +R+L+M  L  IA+   S   LLY+SHH ++ALP + + V  +++G
Sbjct:  137 LLQKVGLEHLRLRGFQLLSTGETRRVMLARALAILPQLLILDDPYAGLDIEHQTSLSELLSEVAE-----------------HTQLLIITSRQEELPPCISHVALFNG-EMLKSGQ-------SVHKLSP------PMTIEQWHKHPVMAQLNALSAQRSDELLALMERQRHNAEAFSPLVEIKNGKVEYVSGLIFSGVNWRIEAGQHWQVRGPNGCGKSTLLGLILG------DHPQCYSNDITLFGRPRGSGESIWQIKQR-------IGIVSSALHLQYRVSCS---ALDVLLSGF--FDSIGLYHKPTKPQ----------------------------LDLAKEWLTILHMSGLASTSFKKLDYGQQRLLLIGRALIKQPLLLILDEPYQGLDFINRSLVMRALEMIAEHHLS--QLLYVSHHREDALPAIHNFVDFIKQG 503          
The following BLAST results are available for this feature:
BLAST of EWM24332.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105726|gb|EWM24332.1|0.000e+0100.00abc transporter related protein [Nannochloropsis g... [more]
gi|553179709|ref|XP_005852749.1|6.739e-13194.09hypothetical protein NGA_0699900, partial [Nannoch... [more]
gi|553192499|ref|XP_005855583.1|3.624e-10085.56atpbinding cassette superfamily [Nannochloropsis g... [more]
gi|974627088|ref|WP_059214663.1|4.558e-3929.57molybdate ABC transporter ATP-binding protein ModF... [more]
gi|524822570|emb|CDF14456.1|1.395e-3827.81uncharacterized protein BN821_02136 [Bacteroides s... [more]
gi|492728826|ref|WP_005937752.1|1.711e-3827.81hypothetical protein [Bacteroides massiliensis] >g... [more]
gi|551543598|ref|XP_005759949.1|3.022e-3832.76ABC transporter [Emiliania huxleyi CCMP1516] >gi|4... [more]
gi|1022657500|ref|WP_063414740.1|7.844e-3829.39molybdate ABC transporter ATP-binding protein ModF... [more]
gi|1134261408|ref|WP_076502130.1|9.582e-3830.49ABC transporter [Shewanella morhuae][more]
gi|1131882316|emb|SIR42485.1|1.102e-3730.49molybdate transport system ATP-binding protein [Sh... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6355rna6355Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications