EWM24332.1, cds6340 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|585105726|gb|EWM24332.1| (abc transporter related protein [Nannochloropsis gaditana]) HSP 1 Score: 1363.98 bits (3529), Expect = 0.000e+0 Identity = 674/674 (100.00%), Postives = 674/674 (100.00%), Query Frame = 0
Query: 1 MAACRIPTRGRCHISWTGTALSSACTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGGGRRGESDSV 674
MAACRIPTRGRCHISWTGTALSSACTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGGGRRGESDSV
Sbjct: 1 MAACRIPTRGRCHISWTGTALSSACTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWNELALKRQKEHEAGGGRRGESDSV 674
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|553179709|ref|XP_005852749.1| (hypothetical protein NGA_0699900, partial [Nannochloropsis gaditana CCMP526] >gi|422295786|gb|EKU23085.1| hypothetical protein NGA_0699900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 395.586 bits (1015), Expect = 6.739e-131 Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0
Query: 25 CTGNKRFATSQTDAAKWRQIYSQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFARGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLST 227
CTGNKRFATSQTDAAKWRQIY QKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFA GKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMM MEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPL + + + T
Sbjct: 1 CTGNKRFATSQTDAAKWRQIYGQKPPPHAGKKALPPQELARLDARNGILVAQESDEGIKTFRAFAGGKEDYVLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMGMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLCIRILRKIIT 203
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|553192499|ref|XP_005855583.1| (atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526] >gi|422293475|gb|EKU20775.1| atpbinding cassette superfamily [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 312.768 bits (800), Expect = 3.624e-100 Identity = 160/187 (85.56%), Postives = 161/187 (86.10%), Query Frame = 0
Query: 132 MSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEI 318
M MEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSP QLCQGFPRLLVDLGLARRS+PRTSMVLVTHRREEVPQEVGRLVSVDGFEI
Sbjct: 1 MGMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSP-------------------------QLCQGFPRLLVDLGLARRSIPRTSMVLVTHRREEVPQEVGRLVSVDGFEI 162
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|974627088|ref|WP_059214663.1| (molybdate ABC transporter ATP-binding protein ModF [Escherichia albertii]) HSP 1 Score: 160.999 bits (406), Expect = 4.558e-39 Identity = 165/558 (29.57%), Postives = 238/558 (42.65%), Query Frame = 0
Query: 96 VLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMED-----TEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEV---GRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQT----VLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLL----ERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISS-LYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLEL 636
+L GD +G NG+GKS +AL G +L S+ + E Q + + + T +++ AG+ T ++ D + + R+L Q G+ L +R LSTGE RK LL L +P +L+LD+PFDGLD SR+ L +L+ L Q GL ++VLV +R +E+P+ V G LV EI GA E L A + L + +L Q+P + P AR L ++L +GV + + +LN +SW+V GE W + G NGAGKSTL L+ + + DL RR G G + HIG VS+ LHL + + V+LSG S G+ S R L+++W DILGI+ PF LS GQQ+L +I RAL+ P LLI DE QGLD +R LI + + + LL++SHH ++A P +H LE
Sbjct: 25 MLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSLFSHITRLSFEQLQKLISDEWQRNNTDMLGPDEDDAGRTTAE---------------------IIQDTVKDAER--CRQLAQQFGITSLLNRRFKYLSTGETRKALLCQALMSAPDLLILDEPFDGLDVASRQQLAELLASLHQA--------GL--------TLVLVLNRFDEIPEFVQFAGVLVDCTLTEI---GAKEG-------LLQQALIAQLAHS-EQLDGVQLPES---DEPSARHGLPASEPRIVLNNGV-VSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIK-----------------KHIGYVSSNLHLDYRVSTT---VRNVILSGY--FDSIGIYQAVSD----------------------------RQQKLVQQWLDILGINKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGET--QLLFVSHHAEDA-PACITHRLEF 475
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|524822570|emb|CDF14456.1| (uncharacterized protein BN821_02136 [Bacteroides sp. CAG:98]) HSP 1 Score: 159.458 bits (402), Expect = 1.395e-38 Identity = 151/543 (27.81%), Postives = 241/543 (44.38%), Query Frame = 0
Query: 100 GDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDP-LARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRAL--GPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
G+H+ ++G NGAGKS+ + G +L M + + F + +K + A ++ G A G + + H L + VV D+L +++P L + L + + K + +LS+GE+RK L TL +PRVL++D PF GLDA +R LH +L +L + + ++LV + +++P + ++ V E M ++ +L+A G P+P R L K + R L + V+ + V GE +L + W VK GE WAL G NG+GKSTL L+ + + A GR G +++ HIG VS E+H A PA +V SGL S G+ +P E++E + W DI GI+ L F +LS G+Q+LV++ARA + P LLI DE GLD +R L+ ++ T + T++ ++H++DE LP + L L+R
Sbjct: 30 GEHIAIVGPNGAGKSILVDTIIGRWPLL------MNEVKYDFSPSPSKM--VYDNIKYIAFRDSYGDADGN---YYYQQRWNTHDLD--ETPVVRDLLPKATNPELKKTLYDLFDIETMLDKHIILLSSGELRKFQLTKTLLSNPRVLIMDNPFIGLDAKTRDQLHALLCELIR---------------MTCLQIILVLSKTDDIPSLITHVIPV-------ENRMCGDKI-TLKAYLAGCKPVPE--RVLSK---EKEERILALPYGDGFYHTDHVVDLNKVSIRYGERTILKELDWSVKCGEKWALSGDNGSGKSTLLSLVCA------DNPQSYACDITLFGRKRGSGESIWEIK-------KHIGYVSPEMH---RAYLKNLPAIDIVASGLH--DSVGL----------------YKRPRPEQMET------------CEWWMDIFGIADLKERSFLQLSSGEQRLVLLARAFVKDPELLILDEPLHGLDLINRRLVKDIIETFCRRRDK--TMIMVTHYKDE-LPMCITGSLHLKRN 482
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|492728826|ref|WP_005937752.1| (hypothetical protein [Bacteroides massiliensis] >gi|482608703|gb|EOA56760.1| hypothetical protein HMPREF1534_00950 [Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223]) HSP 1 Score: 159.073 bits (401), Expect = 1.711e-38 Identity = 151/543 (27.81%), Postives = 241/543 (44.38%), Query Frame = 0
Query: 100 GDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDP-LARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRAL--GPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
G+H+ ++G NGAGKS+ + G +L M + + F + +K + A ++ G A G + + H L + VV D+L +++P L + L + + K + +LS+GE+RK L TL +PRVL++D PF GLDA +R LH +L +L + + ++LV + +++P + ++ V E M ++ +L+A G P+P R L K + R L + V+ + V GE +L + W VK GE WAL G NG+GKSTL L+ + + A GR G +++ HIG VS E+H A PA +V SGL S G+ +P E++E + W DI GI+ L F +LS G+Q+LV++ARA + P LLI DE GLD +R L+ ++ T + T++ ++H++DE LP + L L+R
Sbjct: 30 GEHIAIVGPNGAGKSILVDTIIGRWPLL------MNEVKYDFSPSPSKM--VYDNIKYIAFRDSYGDADGN---YYYQQRWNTHDLD--ETPVVRDLLPKATNPELKKTLYDLFDIETMLDKHIILLSSGELRKFQLTKTLLSNPRVLIMDNPFIGLDAKTRDQLHALLCELIR---------------MTCLQVILVLSKTDDIPSLITHVIPV-------ENRMCGDKI-TLKAYLAGCKPVPE--RVLSK---EKEERILALPYGDGFYHTDHVVDLNKVSIRYGERTILKELDWSVKCGEKWALSGDNGSGKSTLLSLVCA------DNPQSYACDITLFGRKRGSGESIWEIK-------KHIGYVSPEMH---RAYLKNLPAIDIVASGLH--DSVGL----------------YKRPRPEQMET------------CEWWMDIFGIADLKERSFLQLSSGEQRLVLLARAFVKDPELLILDEPLHGLDLVNRRLVKDIIETFCRRRDK--TMIMVTHYKDE-LPMCITGSLHLKRN 482
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|551543598|ref|XP_005759949.1| (ABC transporter [Emiliania huxleyi CCMP1516] >gi|485608151|gb|EOD07520.1| ABC transporter [Emiliania huxleyi CCMP1516]) HSP 1 Score: 160.229 bits (404), Expect = 3.022e-38 Identity = 192/586 (32.76%), Postives = 258/586 (44.03%), Query Frame = 0
Query: 98 RFGDHVCVIGKNGAGKSLFCQALGG---HREVLPHGMMSMEDTEESFQGADAKQERLEGTGCKEAEKEGAGKATGREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDPLARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQ--------------RLASLRALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKARENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLL---------------LERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERGRVSFAGKSEQWN 651
R G HV ++G NGAGK+L +AL HR +L G ++ D G G + A + +SF H LA V LG P AR L+V+ GL+PL Y+ V +STGEIRKVLL L SPR LVLD FDGLD SR+SL ++SQ+ +GF +LLV G+ R+ T ++L+T R EEV EV + + DG A E + RL + A + L R P + A++ P E ++ +GEH +L + WRV E W + G NGAGKSTL+RLL L R R +EE R G+ G GG G G +G VSTE HL +A SE A +V G D ++ VD + L+RPF R+L SQG+QK+V++A AL P LL+ DE CQGLD L ++S + LLYI+HH +E LP VT HVL L+ G ++ G E ++
Sbjct: 82 RAGGHV-LLGANGAGKTLLTEALLEDPLHRTLLREGSLTCAD----------------GWGARSASR--------------VSFDAHQRLLADGGS--VYRALG-HLGPAARYLVVRFGLHPLLYRPVRAISTGEIRKVLLVRALGTSPRCLVLDNAFDGLDVASRQSLSELISQMLRGFGQLLVQ-GVDARATAHTQVLLLTQRAEEVVPEVATMSAFDGEGRLATSAREGRSGAELLADALAPAARLPARALPSEAEVAALWRGGPG---EEASAAASRGGPALVEA-------RSLQVRRGEHTILRGLDWRVGSDEHWLIAGGNGAGKSTLSRLLARAGAEPVAAGDFTVLGR-RARVEEAARGDGEEGGGGGGGGEDVGGGGGGGGDVAAAQGVGWVSTEAHLSVAG--SERTAGEMVAEG---------SDAEAARRVASWLGVD------DLLDRPF-----RML-----------------------SQGEQKVVLVAAALARRPALLVLDEPCQGLDLL--RRRRVLEVVQRVCSASRMRLLYITHHFEEVLPCVT-HVLHLKGGEATYRGPREGYD 573
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|1022657500|ref|WP_063414740.1| (molybdate ABC transporter ATP-binding protein ModF [Klebsiella aerogenes] >gi|1022061815|gb|KZR04606.1| molybdate ABC transporter ATP-binding protein ModF [[Enterobacter] aerogenes]) HSP 1 Score: 157.532 bits (397), Expect = 7.844e-38 Identity = 164/558 (29.39%), Postives = 234/558 (41.94%), Query Frame = 0
Query: 96 VLRFGDHVCVIGKNGAGKSLFCQALGGHREVLPHGMMSMEDTEESFQ-GADAKQERLEGTGCKEAEKEGAGKAT-GREGVMFMSFSMHGHFLARYKDRVVADVLGGSSDP-LARRLIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASL---RALGPAPLPPLPRTLPKLYRPQVPRASTLSSPKAR----ENLQTVLLFDGVRYTKGEHVLLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLL----ERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISS-LYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELER 638
LR G+ +G NG+GKS +AL G +L E +FQ E+L+ E ++ + G E R ++ D DP RL QLG+ L +R LSTGE RK LL L P +L+LD+PFDGLD SR+ L +L+ L Q ++VLV +R +E+P+ IEY G + L+ + +AL L KL +P +P AR EN ++L DG + + ++N +SW V GE W + G NGAGKSTL L+ + + DL RR G G + HIG VS+ LHL+ + + V+LSG S G+ S +H+ ++R W DILGI PF LS GQQ+L +I RAL+ P LLI DE QGLD +R L+ + + ++ LL++SHH ++A P+ +H LE R
Sbjct: 25 TLRAGESWAFVGSNGSGKSALARALAGELTLLNG------QRESTFQRTTRLSFEQLQKLVSDEWQRNNTDMLSPGEEDT------------GRTTAEIIED---EKRDPERCARLAEQLGISHLLSRRFKYLSTGETRKTLLCQALMSDPDLLILDEPFDGLDVASRQQLADLLASLHQ----------------DGITLVLVLNRFDEIPE-----------FIEYAGVLADCTLSEIGEKQALLQQALVAQLAHSEKLTGMTLPEP---DAPAARHDLAENAPLIILNDGT-VSYNDKAIINQLSWTVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIK-----------------KHIGYVSSSLHLEYRVSTN---VRNVILSGY--FDSIGIYQAVSD-------------KQHKLVQR---------------WLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLIGEGAT--QLLFVSHHAEDA-PDCITHRLEFIR 477
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|1134261408|ref|WP_076502130.1| (ABC transporter [Shewanella morhuae]) HSP 1 Score: 157.532 bits (397), Expect = 9.582e-38 Identity = 136/446 (30.49%), Postives = 215/446 (48.21%), Query Frame = 0
Query: 208 LIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYR-PQVPRASTLSSPKA----------RENLQTVLLFDGVRYTKGEHV---LLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
L+ ++GL L + +LSTGE R+V+LA L+ P++L+LD P+ GLD + SL +LS++ + T ++++T R+EE+P + + +G E+ G S+ L P P T+ + ++ P + + + LS+ ++ R N + ++ K E+V + + V+WR++ G+ W ++G NG GKSTL L+L + + + GR G Q++ R IG+VS+ LHLQ +CS A V+LSG S G+ + P L L KEW IL +S L ST F +L GQQ+L++I RALI P LLI DE QGLD +R+L+M L IA+ S LLY+SHH ++ALP + + V +++G
Sbjct: 118 LLQKVGLEHLRLRGFQLLSTGETRRVMLARALAILPQLLILDDPYAGLDIEHQTSLSELLSEVAE-----------------HTQLLIITSRQEELPPCISHVALFNG-EMLKSGQ-------SVHKLSP------PMTIEQWHKHPVMAQLNALSAQRSDELLALMERQRHNAEAFSPLVEIKNGKVEYVSGLIFSGVNWRIEAGQHWQVRGPNGCGKSTLLGLILG------DHPQCYSNDITLFGRPRGSGESIWQIKQR-------IGIVSSALHLQYRVSCS---ALDVLLSGF--FDSIGLYHKPTKPQ----------------------------LDLAKEWLTILHMSGLASTSFKKLDYGQQRLLLIGRALIKQPLLLILDEPYQGLDFINRSLVMRALEMIAEHHLS--QLLYVSHHREDALPAIHNFVDFIKQG 484
BLAST of EWM24332.1 vs. NCBI_GenBank
Match: gi|1131882316|emb|SIR42485.1| (molybdate transport system ATP-binding protein [Shewanella morhuae]) HSP 1 Score: 157.532 bits (397), Expect = 1.102e-37 Identity = 136/446 (30.49%), Postives = 215/446 (48.21%), Query Frame = 0
Query: 208 LIVQLGLYPLWYKRVHMLSTGEIRKVLLAATLSKSPRVLVLDKPFDGLDAPSRKSLHTVLSQLCQGFPRLLVDLGLARRSVPRTSMVLVTHRREEVPQEVGRLVSVDGFEIEYEGAMEAQRLASLRALGPAPLPPLPRTLPKLYR-PQVPRASTLSSPKA----------RENLQTVLLFDGVRYTKGEHV---LLNTVSWRVKQGEVWALKGLNGAGKSTLTRLLLERWREDLEERRRRAGKGGEGGRAEGHTGPSAQVQGRVAVGVPHIGVVSTELHLQLAATCSEWPASAVVLSGLEPLSSAGMVDPASSPPPPPHPPVDQGQPEHERLERPFLNPPARLLPLLKEWGDILGISSLYSTPFGRLSQGQQKLVVIARALIGAPPLLIFDEACQGLDSQHRALIMSLLSTIAKSASSWLTLLYISHHEDEALPEVTSHVLELERG 639
L+ ++GL L + +LSTGE R+V+LA L+ P++L+LD P+ GLD + SL +LS++ + T ++++T R+EE+P + + +G E+ G S+ L P P T+ + ++ P + + + LS+ ++ R N + ++ K E+V + + V+WR++ G+ W ++G NG GKSTL L+L + + + GR G Q++ R IG+VS+ LHLQ +CS A V+LSG S G+ + P L L KEW IL +S L ST F +L GQQ+L++I RALI P LLI DE QGLD +R+L+M L IA+ S LLY+SHH ++ALP + + V +++G
Sbjct: 137 LLQKVGLEHLRLRGFQLLSTGETRRVMLARALAILPQLLILDDPYAGLDIEHQTSLSELLSEVAE-----------------HTQLLIITSRQEELPPCISHVALFNG-EMLKSGQ-------SVHKLSP------PMTIEQWHKHPVMAQLNALSAQRSDELLALMERQRHNAEAFSPLVEIKNGKVEYVSGLIFSGVNWRIEAGQHWQVRGPNGCGKSTLLGLILG------DHPQCYSNDITLFGRPRGSGESIWQIKQR-------IGIVSSALHLQYRVSCS---ALDVLLSGF--FDSIGLYHKPTKPQ----------------------------LDLAKEWLTILHMSGLASTSFKKLDYGQQRLLLIGRALIKQPLLLILDEPYQGLDFINRSLVMRALEMIAEHHLS--QLLYVSHHREDALPAIHNFVDFIKQG 503 The following BLAST results are available for this feature:
BLAST of EWM24332.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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