EWM24354.1, cds6310 (CDS) Nannochloropsis gaditana

Overview
NameEWM24354.1
Unique Namecds6310
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:254391..255762 -
Alignment locationCM002468.1:254153..254280 -
Alignment locationCM002468.1:253713..253940 -
Alignment locationCM002468.1:253196..253339 -
Alignment locationCM002468.1:252944..253047 -
Alignment locationCM002468.1:252431..252785 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24354.1
Producthemolysin-related protein
Orig transcript idgnl|cribi|Naga_100163g11.7192.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:254391..255762 -
CM002468.1supercontigCM002468.1:254153..254280 -
CM002468.1supercontigCM002468.1:253713..253940 -
CM002468.1supercontigCM002468.1:253196..253339 -
CM002468.1supercontigCM002468.1:252944..253047 -
CM002468.1supercontigCM002468.1:252431..252785 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR016166FAD-bd_2
IPR016169CO_DH_flavot_FAD-bd_sub2
IPR002550DUF21
IPR005170Transptr-assoc_dom
IPR000644CBS_dom
Homology
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|585105750|gb|EWM24354.1| (hemolysin-related protein [Nannochloropsis gaditana])

HSP 1 Score: 1583.93 bits (4100), Expect = 0.000e+0
Identity = 776/776 (100.00%), Postives = 776/776 (100.00%), Query Frame = 0
Query:    1 MRRPPPSGGAVHRHATTALLALLLSCARPSLSSPFFPSPAPPYSPSSRPCRLNMHMPGTTAQPFGKRGASLPSAFGGMLPRSNRSPRASYCSAVPRSSASHPSISSYPGPVSVSNPEEAGSAPPAWMAALLKSRLHARGGMERWGGISRALSRFRAWISVQSPRESLIRREGAWASHGLEEDGREGGREGETEESRTWRKAARAVSCNAQKFFAWCNAQKCRPWPCRYGQQASPRQRTSFSPSPPDRKAFASLCRTLGPRLVPQVSFLLLFVLFAAFLPPPLAAQAMALPSPPTGDGNLPSPSGVSPWQRGLIFATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERVYVVDGGEEEEREGEEEEREITEREEEEERKGSREGSREGGKLREKVE 776
            MRRPPPSGGAVHRHATTALLALLLSCARPSLSSPFFPSPAPPYSPSSRPCRLNMHMPGTTAQPFGKRGASLPSAFGGMLPRSNRSPRASYCSAVPRSSASHPSISSYPGPVSVSNPEEAGSAPPAWMAALLKSRLHARGGMERWGGISRALSRFRAWISVQSPRESLIRREGAWASHGLEEDGREGGREGETEESRTWRKAARAVSCNAQKFFAWCNAQKCRPWPCRYGQQASPRQRTSFSPSPPDRKAFASLCRTLGPRLVPQVSFLLLFVLFAAFLPPPLAAQAMALPSPPTGDGNLPSPSGVSPWQRGLIFATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERVYVVDGGEEEEREGEEEEREITEREEEEERKGSREGSREGGKLREKVE
Sbjct:    1 MRRPPPSGGAVHRHATTALLALLLSCARPSLSSPFFPSPAPPYSPSSRPCRLNMHMPGTTAQPFGKRGASLPSAFGGMLPRSNRSPRASYCSAVPRSSASHPSISSYPGPVSVSNPEEAGSAPPAWMAALLKSRLHARGGMERWGGISRALSRFRAWISVQSPRESLIRREGAWASHGLEEDGREGGREGETEESRTWRKAARAVSCNAQKFFAWCNAQKCRPWPCRYGQQASPRQRTSFSPSPPDRKAFASLCRTLGPRLVPQVSFLLLFVLFAAFLPPPLAAQAMALPSPPTGDGNLPSPSGVSPWQRGLIFATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERVYVVDGGEEEEREGEEEEREITEREEEEERKGSREGSREGGKLREKVE 776          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|298705463|emb|CBJ28738.1| (hemolysin-related protein [Ectocarpus siliculosus])

HSP 1 Score: 484.567 bits (1246), Expect = 3.675e-159
Identity = 238/410 (58.05%), Postives = 317/410 (77.32%), Query Frame = 0
Query:  316 TLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVR 725
            TLFV SAAFH+AE +ITTLYPWKVKEFA+EEG +SPF++L +DITRVLTTIL+ATT CTIY+AALFTNLA+++ G+ G+AY+T  LTV TL FGEL+PK+LGV+NAE+VAR ++P I +L+VVL+PV K  ++ + L+L +LG K+ +  RVSE++LRL+V GA+ SGGIE+QEG MI  VL++Q+ ++SE M PRV+V A++  S+++ L  L Q T+YSRIPV+ GEID+I GV + K+LL++V   E+ + + +  ET  + TYFVPETM++W   +EMR+RR+HMAIVVDEYGGTAGV+TLEDI EEV GEIYDE++ ++    E  I + ED  + I G ADLEDV T L  ++  E    +F T  GYLCS AGEIPAV D++VV GY+FT+ +ADERRI EV 
Sbjct:  147 TLFVTSAAFHSAEIAITTLYPWKVKEFAEEEGMDSPFQVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLSSVLVADET--ESTYFVPETMSVWNVLEEMRRRRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEVNEDDLKEFGTLSGYLCSQAGEIPAVGDYVVVGGYMFTVTKADERRIEEVH 554          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|503223164|ref|WP_013457825.1| (HlyC/CorC family transporter [Oceanithermus profundus] >gi|313152804|gb|ADR36655.1| protein of unknown function DUF21 [Oceanithermus profundus DSM 14977])

HSP 1 Score: 363.614 bits (932), Expect = 1.811e-114
Identity = 196/420 (46.67%), Postives = 270/420 (64.29%), Query Frame = 0
Query:  307 PWQRGLIFATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLD-LPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVR 725
            PW    +   LF +S  F AAET+ITTL+PWKV+E A+ EG  SPF +L+RDITR LTTILV      I + AL T+LA    G+ GVAY+T  +T + L FGE+ PKS+ V NA+ +AR  V PI  L+V+L P+G+  +  + L+LR LG++      V+ED+L+L+++GA+ SG IE  E  MI  VL ++E +V E M PRVD+ A++  +SL +   L +  RYSRIPV+   ID+I+G+A +KDLL Y+   E  ++LD L V ++ Q  +FVPE+M +W    E+R+R+VHMAIVVDE+GGTAG++TLEDI EE+ GEIYDE D+EE    E  I++  D  +LI     L+DV   LG+   E    G++ T  GYL    G IP V +     GY F +E ADER+I  VR
Sbjct:   35 PWMDAALLVVLFALSGFFSAAETAITTLWPWKVRELAEREGAGSPFALLQRDITRFLTTILVGNNLVNIAATALVTDLATRAWGSTGVAYATGLMTFLILFFGEITPKSIAVHNADRLARFFVRPIYWLSVLLYPIGRFFTWISALILRALGLEPRQQPLVTEDELKLILSGAEASGAIEEAEEDMIQNVLELEETQVREIMVPRVDIVAIEHTASLREFVRLEREHRYSRIPVYQESIDQIVGIAYAKDLLNYL---ETPDLLDQLTVMSLAQDPFFVPESMPVWNLLLEIRRRKVHMAIVVDEFGGTAGLVTLEDIIEEIVGEIYDETDVEE----EQPIQVQADGSFLIDAQTPLDDVSEALGVVLPE----GEYETLSGYLYETFGYIPKVGEEHTYDGYRFIVEAADERKIERVR 443          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|1189389915|gb|OSX76886.1| (hypothetical protein BU14_0170s0002 [Porphyra umbilicalis])

HSP 1 Score: 370.163 bits (949), Expect = 6.376e-114
Identity = 202/429 (47.09%), Postives = 284/429 (66.20%), Query Frame = 0
Query:  307 PWQRGLIF--ATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSK----EQSNVLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERV 729
            P  R L+     LF   AA  AAET+ITTL+PWKV+E A +EG +SPF +LE+D+TR LTTILVATT  T++S A+ T LA ELLG   V   T G+TVV L FGE++PK+L V +   VAR+MVP I+ ++V+L P+GKVL+  + L+LR   +  + +  VSE++LRL+VAGA +SG I   E Q+I  VL+++EK V E MCPRVD+ A+   ++L+ +  + + + YSR+PV+DG ID IIGV  +K LLEY+  +    ++  VL+L     +   YF+PE+MTIWT  ++MR+RR+H+A+VVDEYGGTAG++TLEDI EEV GEIYDE+D  E    +  + ++ D  Y I G ADL+ V   LGM   EE +  D+ T  G + +  GEIP     ++V     T+  AD+RRI+ +R + V
Sbjct:  197 PTSRPLVVLGVVLFFAGAALAAAETAITTLWPWKVRELADKEGVDSPFAVLEKDLTRFLTTILVATTTATVFSTAMVTELAGELLGNASVGLVTAGMTVVFLFFGEILPKALAVHSPAKVARVMVPVISAISVILYPLGKVLAFLSTLILRFFNVAGESNAAVSEEELRLIVAGADRSGSIAKYESQIIQNVLDLEEKAVREVMCPRVDMVAVPSSATLMDMMNVERVSHYSRMPVYDGSIDNIIGVVYAKSLLEYLVQQPEELDRRKVLEL-----VDTAYFIPESMTIWTVLEQMRKRRLHLAVVVDEYGGTAGLVTLEDILEEVVGEIYDEDDDVEAERRD--LTLLPDGAYAIDGAADLDKVDAALGMSLDEEELH-DYGTISGLVIARMGEIPPCGAEVLVNTVRLTVIDADDRRIVRLRAQAV 617          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|873220710|emb|CEM35031.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 364.385 bits (934), Expect = 6.886e-114
Identity = 202/437 (46.22%), Postives = 285/437 (65.22%), Query Frame = 0
Query:  317 LFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPT----YFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIE-DDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERVYVVDGGEEEEREGEEEERE 748
            LF++SAAFHAAE ++  LYPWK+KEFA+EEG  SPF  L  DI      ILV TTACTI+SA LF N+ +   G + V Y++  LT++T+ F EL+PK+LGVS  E+VAR MV P+ L++ VL P+  + +  + L+L+L  +     + VSE+ LRL++ GA++SGGI+ +EG M+  VL +++K+V+E M PRVDV A+D+R  L +L +L   TR SRIPV+DGEID+I+GV   K++L Y+   +  N+    VE IM P     YF  E M  W   QEMR+ R HM IVVDE+GGTAG++TLEDI EEV G+IYDE+D E+    +D+I   E +  Y I G ADL  V   LG++  EE +   F +  GYLC  AG IP   D++++  Y F +  AD++R++ +RVE +     G+ ++ EG E ER+
Sbjct:   71 LFLLSAAFHAAEKAVDNLYPWKIKEFAEEEGPTSPFAKLMNDILGFQFAILVTTTACTIFSAGLFANVMLMAFGPKSVTYASGVLTLLTVFFAELLPKALGVSQPEVVARSMVGPVILISSVLRPISGLFTRASTLILQLFRLDPKKGDGVSEEMLRLMILGAKESGGIQMEEGSMMESVLKLEDKKVNEVMRPRVDVVAIDRRRKLKELLQLAYETRCSRIPVYDGEIDQIVGVVKLKNVLRYL--NDPRNLETATVEAIMHPERDKPYFFYEMMAAWDVLQEMRRHRFHMGIVVDEHGGTAGIVTLEDILEEVVGDIYDEDDEEDFREEDDMIIHNEAEHYYEISGAADLRAVEKFLGLDIDEESL-SSFNSLSGYLCDEAGRIPDKGDYLLIGSYSFKVIDADDKRVLRLRVESI-----GDMDDEEGPEAERD 499          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|546324453|ref|XP_005718375.1| (unnamed protein product [Chondrus crispus] >gi|507114974|emb|CDF38482.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 361.688 bits (927), Expect = 5.259e-113
Identity = 211/435 (48.51%), Postives = 290/435 (66.67%), Query Frame = 0
Query:  317 LFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVL-DLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGE-DLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERVYVVDGGEEEEREGEEEEREI 749
            +FVI AA  AAET+ITTL+PWKV+E A +EG +SPF +LE D+TR LTTILV TT+ T+ S A+ T +A +  G   V Y T G+TV  L FGE++PK+L V     VAR+MVP I++L++++ PVGK+L+  +  +LR   +  ++D +VSE++LRL+VAGA +SG IE  E Q+I+ VL+++E  V   MCPRVDV AL   S+L +L EL   + YSR+PVF+  ID I+GVAM K LL Y+  +E +++L    V  IM P +FVPE+M++W   +EMR+RR+HMAIVVDEYGGTAG++TLEDI EEV GEIYDE+D   D+  E   IK  +D  +L++G ADLE V   LGM   E+ + GD+ T  G+LC+  G IP V D  V     F +  AD+RRI+ +R E +   +  E  E     EE  +
Sbjct:    1 MFVIGAALAAAETAITTLWPWKVRELADKEGRSSPFAVLESDLTRFLTTILVTTTSATVLSTAIATEVAGDFFGPAAVGYVTAGMTVFFLFFGEILPKALAVHAPAKVARVMVPVISMLSIIVYPVGKLLAWLSTQILRAFKLPMENDAKVSEEELRLIVAGAGRSGSIEKYESQIIHNVLDLEETDVRNVMCPRVDVVALPVTSTLTELLELESESHYSRMPVFEDTIDNIVGVAMLKSLLRYL--REDASLLPTTKVSEIMDPAFFVPESMSVWIVLEEMRKRRLHMAIVVDEYGGTAGLVTLEDILEEVVGEIYDEDD---DYEAEAQFIKKKQDGNFLVEGQADLEKVDQALGMHLDEDDL-GDYGTISGFLCARMGGIPEVGDLWVFNHVRFVVVDADDRRILGLRAEMLSPEEMAESPESHKSHEEANV 429          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|1072227557|gb|OEU12296.1| (CBS-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 355.14 bits (910), Expect = 5.754e-112
Identity = 196/397 (49.37%), Postives = 265/397 (66.75%), Query Frame = 0
Query:  315 ATLFVISAAFHAAETSITTLYPWKVKEFAKEE---GDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSK--EQSNVL------DLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAV 700
             +LFV  A  HAAE +ITTLYPWKVKEFA+EE   G    F+IL  DITRVLTTILVA+T C+I++  +FT+L     GA G  Y  + LT +TL F EL+PKS+GV+NAE VARIM PPIN++  V+SP+G  LS   K  L L+G+K  D+  +++ QLRL+V GA+ SG I+  E +MI  VL +Q +RV E M PRV++ A+ K  S+  +  + + + YSRIPV+DGEID I+G+ ++K++L++  +      +V+       +    +++  YFVPET   W+  QEMR+RRVHMAIVVDEYGGT G+++LEDI EEV GEIYDE+D EE    ED I + +D  ++I+G+ADL D  T L +   EE     FAT  G+LC  AGEIP V
Sbjct:    1 GSLFVALALLHAAEIAITTLYPWKVKEFAEEEEKLGKRGTFKILNEDITRVLTTILVASTTCSIFATTVFTHLVAGSFGASGEKYGALALTFLTLFFVELLPKSIGVTNAESVARIMTPPINIITTVVSPIGMSLSWLVKKTLSLIGLKDKDNASITDSQLRLIVTGARDSGTIDLGEQEMIQGVLGLQNQRVKEIMKPRVEIIAVPKEMSVASVLGVVRESGYSRIPVYDGEIDNIVGIVLAKNVLDFFVNGVLVDEDVIPRRMEKSISTAELIESCYFVPETANGWSVLQEMRRRRVHMAIVVDEYGGTEGLVSLEDIVEEVVGEIYDEDDEEEYDFSEDSITLQDDGSFIIRGDADLGDCDTILDLNLDEEEALKVFATLSGFLCMCAGEIPQV 397          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|676394727|ref|XP_009040641.1| (hypothetical protein AURANDRAFT_32064 [Aureococcus anophagefferens] >gi|323448833|gb|EGB04727.1| hypothetical protein AURANDRAFT_32064 [Aureococcus anophagefferens])

HSP 1 Score: 355.14 bits (910), Expect = 5.173e-111
Identity = 198/453 (43.71%), Postives = 279/453 (61.59%), Query Frame = 0
Query:  314 FATLFVISAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGA------RGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDE-RVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLP---------------VETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGED--LIKMIED--------------DVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVER 728
            +  LFV+++A HAAE +ITTL+PWKV+EFA+EEG +SPF ++  DITRV+TT+LVA+T CT+      T LA   LGA      + +  + +G   VT+ FGEL+PK+LGV NAE +AR  +P I  LAV L+PVG+  S   K +LR LG++ +     VS  +LRLLV GA+ SGGI A+E  M+  VL++Q  RV+E M PRV+V ALD  +SL    E+   T+YSR+P F+ ++D I G+ ++K L+ Y  +   +  L  P                E  ++P YFVPE+M++W   + MR+RR H+A+VVDEYGGTAG+++LEDI EE+ GEIYDEED EE    +D  LI++I                  Y I+G A+L+DV   L ++D+      D  T  G+LC++ GEIP   D I+  G+ FT+  +D RR+ EV  ER
Sbjct:    3 WGVLFVLASAVHAAEIAITTLWPWKVREFAEEEGKDSPFAVVVNDITRVMTTMLVASTVCTVCG----TTLATSALGACFGHSPQRLTVAGLGFAAVTIFFGELLPKTLGVQNAEPIARFALPYIRTLAVFLAPVGRAFSFGVKEILRPLGLEYEGHAGDVSAGELRLLVEGARLSGGIGARESNMVKGVLDLQVTRVAEVMTPRVEVVALDDEASLGDALEVMTSTKYSRLPTFNDDVDNITGILLAKSLIRYAETNTTNMTLHAPPMATTEAALRATRVRDEPGLEPAYFVPESMSVWAVLEAMRRRRCHLAVVVDEYGGTAGIVSLEDILEEIVGEIYDEEDAEEGADVDDRSLIQVILQPSADGDPSTTNALASAYAIKGEAELDDVRAALPLDDE----NFDCVTLSGFLCAVHGEIPKNGDVIIDSGFRFTVVHSDARRVREVLAER 447          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|676388155|ref|XP_009037356.1| (hypothetical protein AURANDRAFT_11312, partial [Aureococcus anophagefferens] >gi|323452116|gb|EGB07991.1| hypothetical protein AURANDRAFT_11312, partial [Aureococcus anophagefferens])

HSP 1 Score: 349.362 bits (895), Expect = 8.999e-110
Identity = 185/382 (48.43%), Postives = 260/382 (68.06%), Query Frame = 0
Query:  354 ILERDITRVLTTILVATTACTIYSAALFTNLAMELLG--ARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDD--ERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSN--VLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRG-----DFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEV 724
            +L+RDITRVLTTILVATT C I S ALF ++A+ + G  AR +AY+T  LT  TL FGEL+PK++GV+NAE  AR++ PPIN++  +L PV    +  +K  L+ +G+  ++   E VSE++LRL++ GA +SGGIE  EG+MI  VL++Q+ RV+E M PRV+V+AL++ +++L+L  L   T +SR+PV+D EIDKI+GV  +K LL+++  K+     + D+ V   ++ TYFVPETM  W   +EMR+RR+HMAIVVDEYGGTAG++TLEDI E V GEIYDE+D EE    E +    ++  Y I+G+A L+D+   L + D +          D  T  G+LC  AGEIP   DHI+V  Y FT+  ADERR++ V
Sbjct:    2 LLDRDITRVLTTILVATTCCNIASTALFADMAVSVCGGSARKLAYATAMLTAGTLFFGELLPKAIGVNNAERTARLLAPPINIMTKILGPVAIGFAGLSKKTLKFVGLIKNEGSAEAVSEEELRLIIGGASESGGIETNEGEMIEGVLDLQDTRVAEIMQPRVNVKALERNATMLELLRLVNATGHSRVPVYDDEIDKIVGVVNAKKLLKFMVKKDADAQPIDDVLVAEFVEETYFVPETMLAWKVLEEMRRRRLHMAIVVDEYGGTAGMVTLEDILEVVVGEIYDEDDTEERDLSEYVTLRADNRTYDIRGDAALDDLVEVLVLRDDDGAELDADAFPDVTTAAGWLCFHAGEIPGEGDHIIVNNYDFTVTDADERRVLRV 383          
BLAST of EWM24354.1 vs. NCBI_GenBank
Match: gi|746418176|ref|WP_039459033.1| (HlyC/CorC family transporter [Thermus sp. 2.9] >gi|729023443|gb|KHG65185.1| hemolysin [Thermus sp. 2.9])

HSP 1 Score: 349.362 bits (895), Expect = 4.200e-109
Identity = 192/418 (45.93%), Postives = 270/418 (64.59%), Query Frame = 0
Query:  321 SAAFHAAETSITTLYPWKVKEFAKEEGDNSPFRILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPTYFVPETMTIWTCFQEMRQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMEDKEEVVRGDFATFGGYLCSLAGEIPAVSDHIVVPGYIFTIEQADERRIIEVRVERVYVVDGGEEE 738
            SA F A+ET+ TTLYPWK+KE A  E +N PF +L RDITR LTTILV      I + AL T+LA    G+ GV  +T  +T + L FGE+ PKS+ V +AE +AR+   PI LL+++  P+G+  S  +  +LRLLG++  +   VSE++LRL++AGA++SG IEAQE +MI+ +L ++E  V E M PRV++ A++  ++L  L  LF+  RYSRIPV+   +D I+GVA +KDLL+Y     + ++    V +I  P YFVPE M  WT  +E+R+R+VH+AIVVDE+GGTAG++TLED+ EE+ GEIYDE D  ED      I+ + +  Y IQ    +++V   LG+E  E    G++ T  G+L  L G IP V + +   G  F +E AD+RRI  VRVER+ V  GG  E
Sbjct:   40 SAFFSASETAFTTLYPWKLKELA--EAENGPFTLLSRDITRFLTTILVGNNLVNIAATALVTDLATRAFGSLGVGLATGVMTFLVLFFGEITPKSIAVHHAEALARVAAWPIYLLSILFYPLGRFFSWVSGAILRLLGLEPRNTPLVSEEELRLILAGAEESGTIEAQEEEMIHSILELEETPVREIMTPRVEMVAIEAEATLEDLLHLFREHRYSRIPVYRESVDHIVGVAYAKDLLDYYC---EGDLKGRSVASIAHPPYFVPENMDAWTLLKELRRRKVHLAIVVDEFGGTAGLVTLEDVMEEIVGEIYDETDEPEDAP----IRRLPNGAYSIQAQTPVDEVSEALGVELPE----GEYDTLSGFLYELFGRIPGVGESVEWRGLRFVVESADQRRIDRVRVERL-VEHGGHGE 443          
The following BLAST results are available for this feature:
BLAST of EWM24354.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105750|gb|EWM24354.1|0.000e+0100.00hemolysin-related protein [Nannochloropsis gaditan... [more]
gi|298705463|emb|CBJ28738.1|3.675e-15958.05hemolysin-related protein [Ectocarpus siliculosus][more]
gi|503223164|ref|WP_013457825.1|1.811e-11446.67HlyC/CorC family transporter [Oceanithermus profun... [more]
gi|1189389915|gb|OSX76886.1|6.376e-11447.09hypothetical protein BU14_0170s0002 [Porphyra umbi... [more]
gi|873220710|emb|CEM35031.1|6.886e-11446.22unnamed protein product [Vitrella brassicaformis C... [more]
gi|546324453|ref|XP_005718375.1|5.259e-11348.51unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|1072227557|gb|OEU12296.1|5.754e-11249.37CBS-domain-containing protein, partial [Fragilario... [more]
gi|676394727|ref|XP_009040641.1|5.173e-11143.71hypothetical protein AURANDRAFT_32064 [Aureococcus... [more]
gi|676388155|ref|XP_009037356.1|8.999e-11048.43hypothetical protein AURANDRAFT_11312, partial [Au... [more]
gi|746418176|ref|WP_039459033.1|4.200e-10945.93HlyC/CorC family transporter [Thermus sp. 2.9] >gi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6325rna6325Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications